Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / overture-stack/SONG issues and pull requests

#856 - Changes related to analysisBase

Pull Request - State: open - Opened by Azher2Ali 5 months ago

#853 - BUG - Unauthorized Error when Creating An Analysis in SONG via Swagger UI

Issue - State: open - Opened by Azher2Ali 5 months ago - 3 comments
Labels: bug

#847 - Updating the documentation by removing icgc and cancer collaboratory references.

Issue - State: open - Opened by Azher2Ali 6 months ago
Labels: documentation

#846 - Remove ICGC Object Storage Configuration from Codebase

Issue - State: open - Opened by Azher2Ali 6 months ago - 1 comment

#844 - Remove ICGC trace from the codebase

Issue - State: open - Opened by Azher2Ali 6 months ago - 1 comment

#843 - Rc/5.2.0

Pull Request - State: closed - Opened by leoraba 7 months ago

#842 - Add documentation on available Auth Providers

Issue - State: open - Opened by joneubank 7 months ago
Labels: documentation

#841 - Keycloak integration

Pull Request - State: closed - Opened by leoraba 7 months ago - 1 comment

#840 - Flyaway upgrade

Issue - State: open - Opened by MitchellShiell 9 months ago

#839 - Update Jenkinsfile

Pull Request - State: closed - Opened by yalturmes 12 months ago

#838 - Song Dev Docs Update

Pull Request - State: open - Opened by MitchellShiell 12 months ago

#837 - Update docker-compose.yml to use latest images for overture

Issue - State: open - Opened by leoraba about 1 year ago
Labels: bug, minor

#836 - add Keycloak auth service

Pull Request - State: closed - Opened by leoraba over 1 year ago

#835 - Implement APIKey as user authentication

Issue - State: open - Opened by leoraba over 1 year ago
Labels: keycloak-integration

#834 - Create new docker-compose file to include keycloak

Issue - State: open - Opened by leoraba over 1 year ago
Labels: keycloak-integration

#833 - Create a Spring profile to choose whether Ego or Keylcloak

Issue - State: closed - Opened by leoraba over 1 year ago - 1 comment
Labels: keycloak-integration

#832 - Keycloak integration

Issue - State: open - Opened by leoraba over 1 year ago
Labels: Epic, keycloak-integration

#831 - Keycloak integration

Issue - State: closed - Opened by leoraba over 1 year ago - 1 comment
Labels: Epic, keycloak-integration

#830 - add Keycloak auth service

Pull Request - State: closed - Opened by leoraba over 1 year ago - 1 comment

#829 - Extract Keycloak permissions using access_token

Issue - State: open - Opened by leoraba over 1 year ago - 1 comment
Labels: keycloak-integration

#828 - handle unauthorized apiKey error message

Pull Request - State: closed - Opened by leoraba over 1 year ago

#827 - format error message

Pull Request - State: closed - Opened by leoraba over 1 year ago

#826 - validate duplicate files

Pull Request - State: closed - Opened by leoraba over 1 year ago

#825 - Deploy Latest Song to Prod

Issue - State: closed - Opened by Buwujiu over 1 year ago
Labels: new-feature

#824 - Add optional validations to prevent duplicate analysis submissions

Issue - State: closed - Opened by leoraba over 1 year ago - 2 comments
Labels: enhancement

#823 - Mergeback @5.1.2-SNAPSHOT

Pull Request - State: closed - Opened by joneubank over 1 year ago

#822 - Versioning 5.1.1

Pull Request - State: closed - Opened by joneubank over 1 year ago

#821 - Release Candidate 5.1.1

Pull Request - State: closed - Opened by joneubank over 1 year ago

#820 - Release Candidate - 5.2.0

Pull Request - State: closed - Opened by joneubank over 1 year ago

#819 - Merge back/5.1.1 snapshot

Pull Request - State: closed - Opened by joneubank over 1 year ago

#818 - Allow null in matched normal all cases

Pull Request - State: closed - Opened by joneubank over 1 year ago

#816 - Adding 2 new enums to specimen_type (database migration)

Pull Request - State: closed - Opened by dahiyaAD over 1 year ago

#814 - Release Candidate 5.1.0

Pull Request - State: closed - Opened by joneubank over 1 year ago

#813 - Bump requests from 2.20.0 to 2.31.0 in /song-python-sdk

Pull Request - State: open - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#812 - Bump golang.org/x/crypto from 0.0.0-20181009213950-7c1a557ab941 to 0.1.0 in /song-go-client

Pull Request - State: open - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#811 - Song GO client updates

Pull Request - State: closed - Opened by leoraba almost 2 years ago

#810 - update package list

Pull Request - State: closed - Opened by leoraba almost 2 years ago

#809 - docker JRE image multi arch supported

Pull Request - State: closed - Opened by leoraba almost 2 years ago

#808 - Project Description, Contributions, Support and Licensing

Issue - State: closed - Opened by MitchellShiell almost 2 years ago
Labels: documentation

#807 - Documentation Style Guide

Issue - State: closed - Opened by MitchellShiell almost 2 years ago
Labels: documentation

#806 - Usage

Issue - State: closed - Opened by MitchellShiell almost 2 years ago
Labels: documentation

#805 - Setting up the developer environment

Issue - State: closed - Opened by MitchellShiell almost 2 years ago
Labels: documentation

#804 - Song Readme-update PR

Issue - State: open - Opened by MitchellShiell almost 2 years ago
Labels: documentation

#803 - Technologies

Issue - State: open - Opened by MitchellShiell almost 2 years ago
Labels: documentation

#802 - Integrations

Issue - State: open - Opened by MitchellShiell almost 2 years ago
Labels: documentation

#801 - Components

Issue - State: open - Opened by MitchellShiell almost 2 years ago
Labels: documentation

#800 - Software Architecture

Issue - State: open - Opened by MitchellShiell almost 2 years ago
Labels: documentation

#799 - Song-client and Song-server unit tests failing due to a Json parsing error

Issue - State: closed - Opened by anncatton almost 2 years ago - 1 comment

#798 - Cannot run docker-compose

Issue - State: closed - Opened by anncatton almost 2 years ago - 2 comments

#797 - Fix song docker demo

Pull Request - State: closed - Opened by leoraba almost 2 years ago

#796 - Technical Details Documentation

Issue - State: closed - Opened by MitchellShiell almost 2 years ago
Labels: documentation

#795 - Developer Setup Documentation

Issue - State: closed - Opened by MitchellShiell almost 2 years ago
Labels: documentation

#794 - Song Documentation MVP

Issue - State: closed - Opened by MitchellShiell almost 2 years ago
Labels: Epic, documentation

#793 - Added missing character

Pull Request - State: closed - Opened by rtisma almost 2 years ago - 3 comments

#792 - mergeback 5.0.3

Pull Request - State: closed - Opened by justincorrigible about 2 years ago

#791 - readme updates

Pull Request - State: open - Opened by MitchellShiell about 2 years ago
Labels: documentation

#790 - Add new enum `Cell line – derived from metastatic tumour` and `Xenograft – derived from metastatic tumour` to specimen_type

Issue - State: closed - Opened by hknahal about 2 years ago - 4 comments
Labels: blocker, Dictionary 1.19

#789 - Readme Update

Pull Request - State: closed - Opened by MitchellShiell about 2 years ago
Labels: documentation

#788 - release 5.0.3

Pull Request - State: closed - Opened by UmmulkiramR about 2 years ago

#787 - Add Search Parameters

Pull Request - State: closed - Opened by UmmulkiramR over 2 years ago

#786 - deep read analysis

Pull Request - State: closed - Opened by lrivera-oicr over 2 years ago

#785 - publish snapshot images from custom branches

Pull Request - State: closed - Opened by justincorrigible over 2 years ago

#784 - Patch analysis

Pull Request - State: closed - Opened by lrivera-oicr over 2 years ago

#783 - Add parameters to GET endpoint /studies/{studyId}/analysis/search/id

Issue - State: closed - Opened by sifavahora over 2 years ago - 3 comments
Labels: new-feature

#782 - PATCH Analysis Endpoint

Issue - State: closed - Opened by lrivera-oicr over 2 years ago - 1 comment

#781 - Release Candidate 5.0.1

Pull Request - State: closed - Opened by joneubank over 2 years ago

#780 - Add analysisId as key to kafka messages

Pull Request - State: closed - Opened by joneubank over 2 years ago

#779 - Send kafka notification to Maestro for Update analysis endpoint

Issue - State: closed - Opened by sifavahora over 2 years ago
Labels: critical

#777 - BUG - Delete Samples Broken in QA and Prod

Issue - State: closed - Opened by Buwujiu over 2 years ago - 2 comments
Labels: bug

#776 - BUG - SONG Publish in Prod return `500` (access denied) error when api_token is Valid

Issue - State: closed - Opened by lindaxiang over 2 years ago - 2 comments
Labels: bug, critical

#775 - Add new enum `Tumour - unknown if derived from primary or metastatic` to specimen_type

Issue - State: closed - Opened by Buwujiu over 2 years ago - 3 comments
Labels: Dictionary 1.17

#774 - Upgrade SpringBoot to 2.6.6

Issue - State: closed - Opened by Buwujiu over 2 years ago
Labels: security, v5.0.0

#773 - Restore bootstrap properties used in Docker build

Issue - State: closed - Opened by Buwujiu over 2 years ago
Labels: v5.0.0

#772 - Release Candidate 5.0.1

Pull Request - State: closed - Opened by Buwujiu over 2 years ago

#771 - merge back 5.0.1-SNAPSHOT

Pull Request - State: closed - Opened by Buwujiu over 2 years ago

#770 - new db script for adding back function

Pull Request - State: closed - Opened by Buwujiu over 2 years ago

#769 - Release Candidate 5.0.0

Pull Request - State: closed - Opened by Buwujiu over 2 years ago

#768 - Fix Secure Profiles after Spring Upgrade

Pull Request - State: closed - Opened by joneubank over 2 years ago - 2 comments

#767 - add new enum value to specimen_type

Pull Request - State: closed - Opened by Buwujiu over 2 years ago - 1 comment

#766 - Test & Verify DELETE Endpoints

Issue - State: closed - Opened by b-f-chan over 2 years ago - 10 comments
Labels: investigation

#765 - Add New Permissible Value to "specimen_type"

Issue - State: closed - Opened by b-f-chan over 2 years ago - 9 comments
Labels: Dictionary 1.15, v5.0.1

#764 - Upgrade spring boot to latest

Issue - State: closed - Opened by akachru-github almost 3 years ago - 2 comments
Labels: Dictionary 1.15, v5.0.0

#763 - Restore bootsrap properties used in Docker build

Pull Request - State: closed - Opened by joneubank almost 3 years ago

#762 - Upgrade SpringBoot to 2.6.6

Pull Request - State: closed - Opened by joneubank almost 3 years ago - 1 comment

#761 - Release Candidate 4.10.0

Pull Request - State: closed - Opened by Buwujiu almost 3 years ago

#760 - Merge Back 4.10.0-SNAPSHOT

Pull Request - State: closed - Opened by Buwujiu almost 3 years ago

#759 - Release Candidate 4.10.0

Pull Request - State: closed - Opened by Buwujiu almost 3 years ago - 1 comment

#758 - change base json schema rule to allow null for tumour RNA payload

Pull Request - State: closed - Opened by Buwujiu almost 3 years ago - 4 comments

#757 - Release Candidate 4.9.0

Pull Request - State: closed - Opened by Buwujiu almost 3 years ago