otiai10/hotsub issues and pull requests

#123 - `docker-machine` version

Issue - State: open - Opened by otiai10 over 5 years ago
Labels: bug, enhancement

#122 - hotsub.yaml

Issue - State: open - Opened by otiai10 almost 6 years ago

#121 - Update paper.md

Pull Request - State: closed - Opened by aokad about 6 years ago - 1 comment

#120 - Update paper.md

Pull Request - State: closed - Opened by friend1ws about 6 years ago - 1 comment

#119 - Add co-authors and Acknowledgements

Pull Request - State: closed - Opened by otiai10 about 6 years ago

#118 - Fixes for submitting paper

Pull Request - State: closed - Opened by otiai10 about 6 years ago

#117 - --concurrency option should cover overall lifecycle, NOT ONLY "create"

Issue - State: closed - Opened by otiai10 about 6 years ago
Labels: enhancement, feature request!

#116 - [WIP] Submit Paper to JOSS

Pull Request - State: closed - Opened by otiai10 about 6 years ago - 5 comments

#115 - Task completion problem

Issue - State: closed - Opened by ken0-1n about 6 years ago - 2 comments

#114 - Create Protocol for handling Sensitive Data

Issue - State: closed - Opened by otiai10 about 6 years ago - 1 comment
Labels: enhancement

#113 - Support WDL

Issue - State: closed - Opened by otiai10 about 6 years ago - 1 comment
Labels: feature request!

#112 - Develop

Pull Request - State: closed - Opened by otiai10 over 6 years ago

#111 - ExTL on GCP

Pull Request - State: closed - Opened by otiai10 over 6 years ago

#110 - Attach EBS for tasks requiring more than 2TB disk volume.

Issue - State: closed - Opened by otiai10 over 6 years ago - 2 comments
Labels: feature request!

#109 - Attach "Tag" to instances

Issue - State: open - Opened by otiai10 over 6 years ago
Labels: enhancement, feature request!

#108 - --provider virtualbox, and --provider hyperv

Issue - State: closed - Opened by otiai10 over 6 years ago
Labels: bug, enhancement, feature request!

#107 - hotsub.exe run --provider local fails in creating machine

Issue - State: closed - Opened by kozo2 over 6 years ago - 2 comments

#106 - Fix bug: use local platform validator

Pull Request - State: closed - Opened by otiai10 over 6 years ago

#105 - Fix bug

Pull Request - State: closed - Opened by otiai10 over 6 years ago

#104 - Make hotsub workspace VPC separately

Pull Request - State: closed - Opened by otiai10 over 6 years ago

#103 - [BREAKING CHANGE] Need `hotsub run` to make it run

Pull Request - State: closed - Opened by otiai10 over 6 years ago

#102 - Docker CWL now works on hotsub!

Pull Request - State: closed - Opened by otiai10 over 6 years ago

#101 - Don't kill other tasks even when any task failed.

Issue - State: closed - Opened by friend1ws over 6 years ago - 1 comment
Labels: enhancement

#100 - Develop

Pull Request - State: closed - Opened by otiai10 over 6 years ago

#99 - --my-ip

Issue - State: closed - Opened by otiai10 over 6 years ago
Labels: feature request!

#98 - Support CWL / WDL

Issue - State: closed - Opened by otiai10 over 6 years ago - 4 comments
Labels: enhancement

#97 - Error creating machine in AWS Cloud9

Issue - State: closed - Opened by ken0-1n over 6 years ago - 4 comments

#96 - Rename project

Issue - State: closed - Opened by otiai10 over 6 years ago
Labels: enhancement

#95 - awsub validate --script ./main.sh --tasks ./foobar.csv

Issue - State: closed - Opened by otiai10 over 6 years ago - 1 comment
Labels: feature request!

#94 - awsub --script ./hello-world.sh --tasks ./hello-world.csv

Issue - State: closed - Opened by otiai10 over 6 years ago
Labels: feature request!

#93 - :tada: Project Renamed!

Pull Request - State: closed - Opened by otiai10 over 6 years ago

#92 - Check path.Join in windows

Issue - State: closed - Opened by otiai10 over 6 years ago
Labels: bug

#91 - "awsub/proxy" Docker image

Issue - State: closed - Opened by otiai10 over 6 years ago - 1 comment
Labels: suggestion, feature request!

#90 - "Machine Name" should have timestamp or date string for 2 reasons

Issue - State: open - Opened by otiai10 over 6 years ago
Labels: enhancement, feature request!

#89 - Use `platform` package with instance role instead of credentials

Issue - State: open - Opened by otiai10 over 6 years ago
Labels: suggestion

#88 - awsub up

Issue - State: open - Opened by otiai10 over 6 years ago - 2 comments
Labels: enhancement, suggestion, feature request!

#87 - Develop

Pull Request - State: closed - Opened by otiai10 over 6 years ago

#86 - Develop

Pull Request - State: closed - Opened by otiai10 over 6 years ago

#85 - Use dkmachine v1

Pull Request - State: closed - Opened by otiai10 over 6 years ago

#84 - ExTL on GCP

Issue - State: closed - Opened by otiai10 over 6 years ago - 2 comments
Labels: enhancement

#83 - Fix bug: race of appending slice elements

Pull Request - State: closed - Opened by otiai10 over 6 years ago

#82 - Protocol for executing awsub batch jobs on public data

Issue - State: closed - Opened by friend1ws over 6 years ago - 2 comments
Labels: enhancement

#81 - Graphical User Interface to execute awsub batch jobs

Issue - State: closed - Opened by friend1ws over 6 years ago - 1 comment
Labels: enhancement

#80 - Develop

Pull Request - State: closed - Opened by otiai10 over 6 years ago - 1 comment

#79 - Figure 3. Time by Concurrency (STAR alignment)

Issue - State: closed - Opened by otiai10 over 6 years ago - 1 comment
Labels: enhancement

#78 - EC2 instance failed to download Input file.

Issue - State: closed - Opened by ken0-1n over 6 years ago - 1 comment

#77 - Check GA4GH batch job definition

Issue - State: closed - Opened by otiai10 over 6 years ago - 1 comment
Labels: question, discussion needed, suggestion

#76 - Retry Exec Attach

Issue - State: closed - Opened by otiai10 over 6 years ago
Labels: bug, enhancement

#75 - Retry Exec Create

Issue - State: closed - Opened by otiai10 over 6 years ago
Labels: bug, enhancement

#74 - Figure 2. Price by Concurrency

Issue - State: closed - Opened by otiai10 over 6 years ago - 5 comments
Labels: enhancement

#73 - Debugf

Issue - State: closed - Opened by otiai10 over 6 years ago - 1 comment
Labels: enhancement

#72 - Documentation Enrichment

Issue - State: closed - Opened by otiai10 over 6 years ago
Labels: enhancement

#71 - Prettify figures

Issue - State: closed - Opened by otiai10 over 6 years ago
Labels: enhancement

#70 - [EXAMPLE] STAR Alignment

Issue - State: closed - Opened by otiai10 over 6 years ago - 1 comment
Labels: enhancement

#69 - Retry machine create

Issue - State: closed - Opened by otiai10 over 6 years ago
Labels: enhancement

#68 - too many open files

Issue - State: closed - Opened by otiai10 over 6 years ago - 2 comments

#67 - Involved destroying is NOT triggered

Issue - State: closed - Opened by otiai10 over 6 years ago - 7 comments

#66 - Destroying machines sometimes failed

Issue - State: closed - Opened by otiai10 over 6 years ago - 1 comment

#65 - job.Errorf

Issue - State: closed - Opened by otiai10 over 6 years ago
Labels: enhancement

#64 - Develop

Pull Request - State: closed - Opened by otiai10 over 6 years ago

#63 - Application stdout/stderr is NOT logged

Issue - State: closed - Opened by otiai10 over 6 years ago
Labels: enhancement

#62 - [to be fixed] Shared volume is sometimes empty

Issue - State: closed - Opened by otiai10 over 6 years ago - 2 comments
Labels: bug, wontfix

#61 - [FATAL] awsub process died when concurrency is more than (for example) 64

Issue - State: closed - Opened by otiai10 over 6 years ago - 9 comments
Labels: bug

#60 - Freeze dependencies with using `dep`

Issue - State: open - Opened by otiai10 over 6 years ago - 1 comment

#59 - remain exit code of `awsub` somewhre

Issue - State: closed - Opened by otiai10 over 6 years ago
Labels: enhancement

#58 - Develop

Pull Request - State: closed - Opened by otiai10 over 6 years ago

#57 - [INDEPENDENCY] bin to docker-machine

Issue - State: closed - Opened by otiai10 over 6 years ago - 1 comment
Labels: enhancement, wontfix

#56 - Integration with `cascade`

Issue - State: closed - Opened by otiai10 over 6 years ago - 1 comment
Labels: suggestion

#55 - [MAINTENANCE] AWS configs cleaning up makes examples NOT working

Issue - State: closed - Opened by otiai10 over 6 years ago - 1 comment
Labels: enhancement, question

#54 - Validate script and variables before creating machine... it's so sad ;-(

Issue - State: closed - Opened by otiai10 over 6 years ago - 1 comment
Labels: enhancement, discussion needed

#53 - [INDEPENDENCY] Automatically create instance profile

Issue - State: closed - Opened by otiai10 over 6 years ago - 1 comment
Labels: bug, enhancement, discussion needed

#52 - Throttle AWS API calling

Issue - State: closed - Opened by otiai10 over 6 years ago - 2 comments
Labels: bug, enhancement

#51 - Performance measurement

Issue - State: closed - Opened by otiai10 over 6 years ago - 2 comments

#50 - Develop

Pull Request - State: closed - Opened by otiai10 over 6 years ago

#49 - --keep-shared and --shared-data-instance-ip options

Issue - State: closed - Opened by otiai10 over 6 years ago
Labels: discussion needed

#48 - Separate "machine-create" and "containers up" process from "Create"

Issue - State: closed - Opened by otiai10 over 6 years ago
Labels: enhancement

#47 - Example with using bwa

Issue - State: closed - Opened by otiai10 over 6 years ago - 1 comment
Labels: enhancement

#46 - Metrics

Issue - State: closed - Opened by otiai10 over 6 years ago
Labels: enhancement

#45 - ExETL

Pull Request - State: closed - Opened by otiai10 over 6 years ago

#44 - [Option] Use EFS for Shared Data Instance

Issue - State: closed - Opened by otiai10 over 6 years ago - 1 comment
Labels: enhancement, question, discussion needed

#43 - Refactoring for ExETL

Pull Request - State: closed - Opened by otiai10 over 6 years ago

#42 - Fix README

Pull Request - State: closed - Opened by otiai10 over 6 years ago

#41 - Logging Instance Time

Issue - State: closed - Opened by otiai10 over 6 years ago - 1 comment
Labels: enhancement

#40 - [survey] Support Azure

Issue - State: closed - Opened by otiai10 over 6 years ago - 1 comment
Labels: discussion needed

#39 - Implement Prototype of Ex{E}TL

Issue - State: closed - Opened by otiai10 over 6 years ago - 1 comment
Labels: enhancement

#38 - Unable to run docker-machine provisioning

Issue - State: closed - Opened by ken0-1n almost 7 years ago - 3 comments

#36 - Security Group Limit Exceeded

Issue - State: closed - Opened by ken0-1n almost 7 years ago - 1 comment
Labels: enhancement

#33 - Timestamp change because of uploading to S3.

Issue - State: closed - Opened by friend1ws almost 7 years ago - 1 comment
Labels: wontfix

#31 - Delete machines on SIGINT

Issue - State: open - Opened by otiai10 almost 7 years ago - 1 comment
Labels: enhancement

#27 - Error when the specified bucket for output does not exist

Issue - State: open - Opened by friend1ws almost 7 years ago - 3 comments
Labels: enhancement

#25 - Behavior when the column value of '--input' is empty

Issue - State: closed - Opened by ken0-1n almost 7 years ago
Labels: enhancement

#24 - Error creating machine

Issue - State: closed - Opened by aokad almost 7 years ago - 3 comments

#22 - Allow http/https for "--inputs"

Issue - State: open - Opened by otiai10 almost 7 years ago - 2 comments
Labels: enhancement

#18 - Enhancement for uploading files directly to VM instances.

Issue - State: closed - Opened by friend1ws almost 7 years ago - 2 comments
Labels: wontfix

#14 - Use Spot Instances

Issue - State: open - Opened by otiai10 almost 7 years ago
Labels: enhancement, feature request!

#13 - Retry on Failure of Creating Machine

Issue - State: closed - Opened by otiai10 almost 7 years ago - 2 comments
Labels: enhancement, wontfix

#12 - Option for spot instance

Issue - State: closed - Opened by otiai10 almost 7 years ago - 1 comment
Labels: enhancement

#7 - Add license file

Issue - State: closed - Opened by otiai10 almost 7 years ago - 1 comment
Labels: enhancement

#5 - CI automation

Issue - State: closed - Opened by otiai10 almost 7 years ago - 1 comment
Labels: enhancement

#2 - Generation of log files

Issue - State: closed - Opened by friend1ws almost 7 years ago - 2 comments
Labels: enhancement

GitHub / otiai10/hotsub issues and pull requests