Ecosyste.ms: Issues
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GitHub / openworm/opendata issues and pull requests
#30 - Start write up process
Issue -
State: open - Opened by slarson over 5 years ago
#29 - Address the ~140 GB worm.db issue with movement data
Issue -
State: open - Opened by slarson over 5 years ago
- 3 comments
#28 - Ask Emmons lab about parameters such as scale, z-distance for each data set
Issue -
State: open - Opened by slarson over 5 years ago
#27 - Add a test to the POW test suite that validates the uploading of movement metadata has worked
Issue -
State: open - Opened by slarson over 5 years ago
#26 - Create yaml files for each data file in the leifer and in the kato data sets
Issue -
State: open - Opened by slarson over 5 years ago
- 1 comment
#25 - Receive and analyse new data set from Emmons Lab
Issue -
State: open - Opened by slarson over 5 years ago
- 2 comments
#24 - Remove unwanted points from standard worm
Issue -
State: open - Opened by EST09 over 5 years ago
#23 - Set up a session with Mark Watts to discuss PyOpenWorm Integration with Zenodo content
Issue -
State: open - Opened by slarson over 5 years ago
#22 - Do a metadata comparison between movement analysis db, liefer data, zimmer data
Issue -
State: open - Opened by slarson over 5 years ago
#21 - Build a streaming pipeline to pull metadata from Zenodo movement db into a zipfile
Issue -
State: open - Opened by slarson over 5 years ago
#20 - Figure out which neurons correspond to which row of heatmap: Kato dataset
Issue -
State: open - Opened by EST09 over 5 years ago
#19 - Neuronal Analysis of Leifer Dataset
Issue -
State: open - Opened by EST09 over 5 years ago
- 1 comment
#18 - Draft for clustering points on Standard Worm
Issue -
State: closed - Opened by EST09 over 5 years ago
#17 - Set up follow up session with Scott Emmons to show point cloud progress
Issue -
State: open - Opened by slarson over 5 years ago
#16 - Produce 3D interactive view of the point cloud from the standard worm dataset
Issue -
State: open - Opened by slarson over 5 years ago
#15 - Reduce the points in the standard worm dataset
Issue -
State: open - Opened by slarson over 5 years ago
#14 - Experiement with creating a heat map from the neuronal-analysis dataset
Issue -
State: open - Opened by slarson over 5 years ago
#13 - Integrating Movement Metadata into POW
Issue -
State: open - Opened by EST09 over 5 years ago
- 2 comments
#12 - Talk to Gopel Sarma
Issue -
State: closed - Opened by EST09 over 5 years ago
#11 - Test uploading into Zenodo
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State: closed - Opened by slarson over 5 years ago
- 1 comment
#10 - Straighten Curved Worm
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State: open - Opened by EST09 over 5 years ago
- 1 comment
#9 - Have key conversations with collaborators
Issue -
State: closed - Opened by slarson over 5 years ago
#8 - Determine how to operationalize FAIR principles for the data sets we identify
Issue -
State: closed - Opened by slarson over 5 years ago
- 3 comments
#7 - Find references on different dynamical types of c. elegans neurons
Issue -
State: closed - Opened by slarson over 5 years ago
- 2 comments
#6 - Download and have a look at the first candidate standard worm dataset
Issue -
State: closed - Opened by slarson over 5 years ago
- 4 comments
#5 - Read paper about making a ML model of worm movement
Issue -
State: closed - Opened by slarson over 5 years ago
- 1 comment
#4 - Send / find materials about linear / nonlinear image transformations (volumes)
Issue -
State: closed - Opened by slarson over 5 years ago
#3 - Send materials about standard worm
Issue -
State: closed - Opened by slarson over 5 years ago
- 1 comment
#2 - Prepare slide presentation on current understanding of project
Issue -
State: closed - Opened by slarson over 5 years ago
- 1 comment
#1 - Digest FAIR Principles
Issue -
State: closed - Opened by slarson over 5 years ago
- 2 comments