openvax/pepdata issues and pull requests

#44 - Get rid of old datasets

Pull Request - State: closed - Opened by iskandr about 7 years ago

#43 - updated urls Dana Farber Repository

Pull Request - State: open - Opened by ghost about 7 years ago - 2 comments

#42 - cut a pip release

Issue - State: closed - Opened by timodonnell about 8 years ago - 1 comment

#41 - py3 unicode is not defined

Issue - State: closed - Opened by timodonnell about 8 years ago - 1 comment

#40 - Add MANIFEST.in to properly include data files

Pull Request - State: closed - Opened by tavinathanson almost 9 years ago

#39 - Bump version

Pull Request - State: closed - Opened by tavinathanson almost 9 years ago

#38 - Add `init.py` to matrices and data to fix #37

Pull Request - State: closed - Opened by tavinathanson over 9 years ago

#37 - Data files are not included with pip install

Issue - State: closed - Opened by tavinathanson over 9 years ago - 1 comment
Labels: bug

#36 - PEP8, refactor IEDB

Pull Request - State: closed - Opened by iskandr over 9 years ago - 4 comments

#35 - data files are in epitopes cache folder

Issue - State: closed - Opened by arahuja over 9 years ago - 1 comment

#34 - mhc_class filter misses some patterns

Issue - State: closed - Opened by arahuja over 9 years ago - 1 comment

#33 - Adding matrices and other setup.py changes

Pull Request - State: closed - Opened by tavinathanson over 9 years ago

#32 - setup.py does not include matrices data files

Issue - State: closed - Opened by tavinathanson over 9 years ago - 2 comments
Labels: bug

#31 - Changing requires to install_requires, as that's the setuptools argument

Pull Request - State: closed - Opened by tavinathanson over 10 years ago

#30 - Use datacache for downloads

Pull Request - State: closed - Opened by iskandr over 10 years ago

#29 - mutation pos didn't subtract start of region

Pull Request - State: closed - Opened by iskandr over 10 years ago

#28 - Add number mutated residues

Pull Request - State: closed - Opened by iskandr over 10 years ago

#27 - Protein mutation info

Pull Request - State: closed - Opened by iskandr over 10 years ago

#26 - Returns start and stop of affected proteins

Pull Request - State: closed - Opened by arahuja over 10 years ago

#25 - mutate for max length

Pull Request - State: closed - Opened by arahuja over 10 years ago - 1 comment

#24 - mutate.py for epitope mutation handling

Pull Request - State: closed - Opened by arahuja over 10 years ago

#23 - Add COSMIC as a source of mutant peptides

Issue - State: open - Opened by iskandr over 10 years ago

#22 - Remove all print statements

Issue - State: closed - Opened by arahuja over 10 years ago - 1 comment

#21 - Fixing syntax error for hpv

Pull Request - State: closed - Opened by arahuja over 10 years ago

#20 - Move mutation processing to epitopes

Issue - State: closed - Opened by arahuja over 10 years ago

#19 - Add BCIPep dataset

Issue - State: open - Opened by iskandr over 10 years ago

#18 - Add MHCPep dataset

Issue - State: open - Opened by iskandr over 10 years ago

#17 - Add _ngrams loaders for single-class datasets

Issue - State: open - Opened by iskandr over 10 years ago