Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / openpharma/mmrm issues and pull requests
#259 - Fitting intercept only model
Issue -
State: closed - Opened by kkmann over 1 year ago
Labels: bug
#258 - Fix documentation error in spatial exponential covariance function
Issue -
State: closed - Opened by kkmann over 1 year ago
- 3 comments
Labels: bug, documentation, SP1
#257 - [WIP] refactor `h_mmrm_tmb_data()`
Pull Request -
State: closed - Opened by kkmann over 1 year ago
- 4 comments
#256 - Add Matérn covariance function
Issue -
State: open - Opened by kkmann over 1 year ago
- 2 comments
Labels: enhancement, blocked
#255 - modularize `h_mmrm_tmb_data()`
Issue -
State: closed - Opened by kkmann over 1 year ago
- 2 comments
Labels: internals
#254 - [WIP] implementing predict.mmrm_tmb()
Pull Request -
State: closed - Opened by kkmann over 1 year ago
- 18 comments
Labels: enhancement
#253 - Add tests for 'fitted()' method
Issue -
State: closed - Opened by kkmann over 1 year ago
- 4 comments
Labels: good first issue, help wanted, SP2
#252 - update model.frame and with functionality
Pull Request -
State: closed - Opened by clarkliming over 1 year ago
- 4 comments
#251 - Alternative link functions?
Issue -
State: closed - Opened by wlandau over 1 year ago
- 3 comments
Labels: enhancement
#250 - use pseudo inverse squareroot on transformed x
Pull Request -
State: closed - Opened by clarkliming over 1 year ago
- 1 comment
#249 - potential update following paper suggest
Pull Request -
State: closed - Opened by clarkliming over 1 year ago
#248 - update question about brl
Pull Request -
State: closed - Opened by clarkliming over 1 year ago
#247 - add tidy() and glance() methods
Issue -
State: closed - Opened by Generalized over 1 year ago
- 7 comments
Labels: enhancement, SP5
#246 - [Hard to reproduce] different results obtained from repeated `mmrm()` invocation
Issue -
State: closed - Opened by danielinteractive over 1 year ago
- 13 comments
Labels: discussion
#245 - Add reports to pkgdown documentation
Pull Request -
State: closed - Opened by walkowif over 1 year ago
- 2 comments
#244 - 219 confirmation on large tp
Pull Request -
State: closed - Opened by clarkliming over 1 year ago
- 4 comments
#243 - `emmeans()` fails when covariates are transformed in the model formula
Issue -
State: closed - Opened by danielinteractive over 1 year ago
- 1 comment
Labels: bug, SP5, priority
#242 - 222 fix publication references (#242)Co-authored-by: Daniel Sabanes Bove <[email protected]>
Pull Request -
State: closed - Opened by chstock over 1 year ago
- 4 comments
#241 - [Feature request] Adding the CR2 empirical/robust covariance estimator for small-sample cases (like in clubSandwich)
Issue -
State: closed - Opened by Generalized over 1 year ago
- 3 comments
Labels: enhancement, SP5
#240 - Fix pkgdown workflow
Pull Request -
State: closed - Opened by walkowif over 1 year ago
- 2 comments
#239 - 220 time as factor
Pull Request -
State: closed - Opened by danleibovitz over 1 year ago
- 2 comments
#238 - fix na errors
Pull Request -
State: closed - Opened by clarkliming over 1 year ago
- 2 comments
#237 - Be careful not to allow any other `na.action` option besides `na.omit()`
Issue -
State: closed - Opened by kzkzmr over 1 year ago
- 1 comment
Labels: bug, SP2, devops
#236 - 230 satterthwaite
Pull Request -
State: closed - Opened by clarkliming over 1 year ago
- 2 comments
#235 - Pkgdown dropdowns
Pull Request -
State: closed - Opened by cicdguy over 1 year ago
- 4 comments
#234 - Updates to manual
Pull Request -
State: closed - Opened by danjamstat over 1 year ago
- 1 comment
#233 - Triggering doc. push to gh-pages
Pull Request -
State: closed - Opened by arkadiuszbeer over 1 year ago
- 2 comments
#232 - Avoid the need to recalculate any Cholesky factors for normalized residuals
Issue -
State: closed - Opened by danielinteractive over 1 year ago
Labels: SP5, devops, C++
#231 - Add `tidymodels` to documentation
Issue -
State: closed - Opened by danielinteractive over 1 year ago
- 7 comments
Labels: documentation, SP3
#230 - Satterthwaite degree of freedom for Sandwich Estimator
Issue -
State: closed - Opened by clarkliming over 1 year ago
- 1 comment
Labels: SP5, discussion
#229 - Raise errors as warnings to avoid capture and re-emission of errors during fit
Issue -
State: open - Opened by dgkf over 1 year ago
- 1 comment
Labels: enhancement, discussion
#228 - use `roxytypes` and `roxylint` packages
Issue -
State: open - Opened by dgkf over 1 year ago
- 6 comments
Labels: documentation, SP5, devops
#227 - Consider adding support for multiple imputation (incl. pooling results for inference via emmeans)
Issue -
State: closed - Opened by Generalized over 1 year ago
- 2 comments
Labels: enhancement
#226 - New vignette with a methodological introduction to MMRMs
Pull Request -
State: closed - Opened by chstock over 1 year ago
- 5 comments
#225 - Refactor to use `cov_struct` for covariance structure
Pull Request -
State: closed - Opened by dgkf over 1 year ago
- 2 comments
#224 - between-within degree of freedom
Issue -
State: closed - Opened by clarkliming over 1 year ago
- 21 comments
Labels: enhancement, SP5
#223 - update branch
Pull Request -
State: closed - Opened by chstock over 1 year ago
- 3 comments
#222 - Fix publication references
Issue -
State: closed - Opened by chstock over 1 year ago
- 8 comments
Labels: bug, documentation, SP1
#221 - Warning when passing `optimizer` through `mmrm` to `h_get_optimizers`
Issue -
State: closed - Opened by dgkf over 1 year ago
- 7 comments
Labels: bug
#220 - Clarify in documentation that non-spatial covariance structure needs factor variable
Issue -
State: closed - Opened by danielinteractive over 1 year ago
- 1 comment
Labels: documentation, SP1
#219 - Ask for confirmation to fit model if more than xxx time points (for non-spatial)
Issue -
State: closed - Opened by danielinteractive over 1 year ago
Labels: SP3
#218 - Allowing interface for covariance outside of formula to support tidymodels interop
Issue -
State: closed - Opened by dgkf over 1 year ago
- 6 comments
Labels: enhancement
#217 - Unstructured covariance when time is continuous
Issue -
State: closed - Opened by DanChaltiel over 1 year ago
- 4 comments
Labels: enhancement
#216 - `PROC MIXED` Repeated Measures Variable Reordering
Pull Request -
State: closed - Opened by PhilBoileau over 1 year ago
- 4 comments
#215 - add empirical and jackknife covariance
Pull Request -
State: closed - Opened by clarkliming over 1 year ago
- 9 comments
#214 - Adding tidymodels support
Pull Request -
State: closed - Opened by dgkf over 1 year ago
- 14 comments
#213 - add spatial exponential KR
Pull Request -
State: closed - Opened by clarkliming over 1 year ago
- 4 comments
#212 - Add `latest-release` to pkgdown website as default
Issue -
State: closed - Opened by danielinteractive almost 2 years ago
- 5 comments
Labels: documentation, SP2
#211 - add covrpage vignette to communicate package testing health
Pull Request -
State: closed - Opened by yonicd almost 2 years ago
- 16 comments
#210 - residuals S3 method for mmrm_tmb
Pull Request -
State: closed - Opened by danjamstat almost 2 years ago
- 10 comments
#209 - `covr::package_coverage()` build fail on Windows
Issue -
State: closed - Opened by yonicd almost 2 years ago
- 9 comments
Labels: discussion
#208 - CSH Covariance Matrix Inference Benchmarking
Pull Request -
State: closed - Opened by PhilBoileau almost 2 years ago
- 6 comments
#207 - 206: skip flaky test on CRAN
Pull Request -
State: closed - Opened by danielinteractive almost 2 years ago
#206 - Skip flaky test on CRAN
Issue -
State: closed - Opened by danielinteractive almost 2 years ago
Labels: SP1, priority
#205 - 204: fix check notes as much as possible [skip vbump]
Pull Request -
State: closed - Opened by danielinteractive almost 2 years ago
#204 - Address CRAN check notes
Issue -
State: closed - Opened by danielinteractive almost 2 years ago
Labels: SP2, priority
#203 - 202: Polishing before CRAN release [skip vbump]
Pull Request -
State: closed - Opened by danielinteractive almost 2 years ago
#202 - Add new features to package documentation
Issue -
State: closed - Opened by danielinteractive almost 2 years ago
- 2 comments
Labels: SP5, priority
#201 - fix warnings
Pull Request -
State: closed - Opened by clarkliming almost 2 years ago
#200 - allow levels to be kept
Pull Request -
State: closed - Opened by clarkliming almost 2 years ago
#199 - Add Kenward-Roger implementation for spatial covariance structures
Issue -
State: closed - Opened by danielinteractive almost 2 years ago
- 1 comment
Labels: enhancement, SP5
#198 - Clean up C++ to eliminate warnings
Issue -
State: closed - Opened by danielinteractive almost 2 years ago
Labels: SP2, devops
#197 - 181: Add Satterthwaite vignette
Pull Request -
State: closed - Opened by danielinteractive almost 2 years ago
#196 - update contributing guide
Pull Request -
State: closed - Opened by clarkliming almost 2 years ago
#195 - update mmrm_control
Pull Request -
State: closed - Opened by clarkliming almost 2 years ago
- 4 comments
#194 - Skip error-prone tests on Fedora + Clang
Pull Request -
State: closed - Opened by dgkf almost 2 years ago
- 2 comments
#193 - Use automatic differentiation to calculate the Jacobian for Satterthwaite
Issue -
State: closed - Opened by danielinteractive almost 2 years ago
Labels: SP5, devops, C++
#192 - Avoid macro definitions by resolving conflicts between Rcpp and TMB
Issue -
State: open - Opened by clarkliming almost 2 years ago
Labels: SP5, devops, C++
#191 - Add `residuals()` method for `mmrm_tmb`
Issue -
State: closed - Opened by danielinteractive almost 2 years ago
- 4 comments
Labels: enhancement, SP5
#190 - Add `simulate()` method for `mmrm_tmb` (or `mmrm` if we need adjusted cov matrix of fixed effects)
Issue -
State: closed - Opened by danielinteractive almost 2 years ago
- 18 comments
Labels: enhancement, SP5
#189 - Add `predict()` method for `mmrm_tmb`
Issue -
State: closed - Opened by danielinteractive almost 2 years ago
- 8 comments
Labels: enhancement, SP8, C++
#188 - Add `control` argument to `mmrm()` interface to simplify it
Issue -
State: closed - Opened by danielinteractive almost 2 years ago
- 7 comments
Labels: enhancement, SP3
#187 - Add Option/Function for Relative Change Calculation?
Issue -
State: closed - Opened by changjosh92 almost 2 years ago
- 2 comments
Labels: enhancement
#186 - Fix CRAN check problems
Issue -
State: closed - Opened by danielinteractive almost 2 years ago
- 12 comments
Labels: bug, SP2, priority
#182 - implementations of KR
Pull Request -
State: closed - Opened by clarkliming almost 2 years ago
- 11 comments
#181 - add degree of freedom for Satterthwaite vignettes
Issue -
State: closed - Opened by clarkliming almost 2 years ago
Labels: documentation, SP3
#180 - implement KR1 method for covariance calculation/testing
Issue -
State: closed - Opened by clarkliming almost 2 years ago
- 2 comments
Labels: enhancement, SP13
#174 - Consider nested covariance structures?
Issue -
State: open - Opened by danielinteractive almost 2 years ago
- 13 comments
Labels: discussion
#172 - Shall we cache the `lower_chol` for subjects so that it will not be re-calculated?
Issue -
State: closed - Opened by clarkliming almost 2 years ago
- 3 comments
Labels: devops, discussion
#170 - Warn when visit levels are dropped / consider flag to include all levels
Issue -
State: closed - Opened by clarkliming almost 2 years ago
- 5 comments
Labels: enhancement, SP2
#169 - create s3 method for {multilevelmod}
Issue -
State: closed - Opened by yonicd almost 2 years ago
- 2 comments
Labels: enhancement, SP5
#165 - 93 mmrm review comparison
Pull Request -
State: closed - Opened by BrianLang almost 2 years ago
- 25 comments
#164 - [feature request] add likelihood ratio test
Issue -
State: open - Opened by clarkliming almost 2 years ago
- 8 comments
Labels: enhancement, discussion
#162 - Add Imports explanations to contributing guide
Issue -
State: closed - Opened by danielinteractive almost 2 years ago
- 5 comments
Labels: SP1, devops, discussion
#156 - Improve use of optimizers in general, incl. refitting, default choice, etc.
Issue -
State: closed - Opened by kkmann almost 2 years ago
- 2 comments
Labels: discussion
#153 - Good explanation of name + G/R side random effects
Issue -
State: closed - Opened by kkmann almost 2 years ago
- 9 comments
Labels: documentation, SP3
#149 - add basic explorations of KR df
Pull Request -
State: closed - Opened by clarkliming almost 2 years ago
- 7 comments
#110 - Improve handling of `visits_zero_inds` and `coordinates`
Issue -
State: closed - Opened by clarkliming about 2 years ago
- 2 comments
Labels: enhancement, SP8, devops, C++
#93 - Comparison with other implementations / packages
Issue -
State: closed - Opened by BrianLang about 2 years ago
- 24 comments
Labels: documentation, good first issue, SP3, priority
#67 - Design for Type II and Type III tests a la `car::Anova()`
Issue -
State: closed - Opened by danielinteractive about 2 years ago
- 14 comments
Labels: SP8
#53 - Robust sandwich estimator
Issue -
State: closed - Opened by danielinteractive over 2 years ago
Labels: enhancement, SP8