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GitHub / openpathsampling/openpathsampling issues and pull requests

#1070 - [TODO] Unpin GitPython

Issue - State: closed - Opened by dwhswenson almost 4 years ago - 1 comment

#1069 - Temporary pin for GitPython

Pull Request - State: closed - Opened by dwhswenson almost 4 years ago - 3 comments

#1068 - New analysis testing utilities

Pull Request - State: closed - Opened by dwhswenson almost 4 years ago - 5 comments
Labels: enhancement

#1067 - Does OPS officially support pypi?

Issue - State: closed - Opened by sroet almost 4 years ago - 1 comment

#1066 - Clear old ExternalMDSnapshots during `iter_generate`

Pull Request - State: closed - Opened by dwhswenson almost 4 years ago - 4 comments
Labels: enhancement

#1065 - improvements to unpatch after using SimStore

Pull Request - State: closed - Opened by dwhswenson almost 4 years ago - 1 comment
Labels: misc PR, experimental

#1064 - Add CITATIONS.md

Pull Request - State: closed - Opened by sroet almost 4 years ago - 5 comments
Labels: misc PR

#1063 - Add citation to the repo

Issue - State: closed - Opened by sroet almost 4 years ago

#1062 - Limit nightly CI and release/deployment CI to the base repository (not forks).

Pull Request - State: closed - Opened by bdice almost 4 years ago - 4 comments

#1061 - Nightly tests / release workflows failing on forks

Issue - State: open - Opened by bdice almost 4 years ago - 1 comment

#1060 - [WIP] Add HOOMD Engine

Pull Request - State: closed - Opened by bdice almost 4 years ago - 2 comments
Labels: feature

#1059 - [WIP] New "snapshot features" implementation

Pull Request - State: open - Opened by dwhswenson almost 4 years ago - 6 comments
Labels: 2.0

#1058 - Remove engine binary after tests

Pull Request - State: closed - Opened by sroet almost 4 years ago - 1 comment
Labels: misc PR

#1057 - Fix documentation issues

Pull Request - State: closed - Opened by bdice almost 4 years ago - 2 comments
Labels: misc PR, docs

#1056 - Bump version to 1.5.3.dev0

Pull Request - State: closed - Opened by dwhswenson almost 4 years ago - 1 comment

#1055 - Adding support for HOOMD-blue simulation engine

Issue - State: open - Opened by bdice almost 4 years ago - 3 comments

#1054 - OpenPathSampling 1.5.2

Pull Request - State: closed - Opened by dwhswenson almost 4 years ago - 2 comments

#1053 - OpenPathSampling 1.5.2

Pull Request - State: closed - Opened by dwhswenson almost 4 years ago - 3 comments

#1052 - Prevent non-string names in StorableNamedObject

Pull Request - State: closed - Opened by dwhswenson almost 4 years ago - 1 comment
Labels: misc PR

#1051 - Fixes for OpenMM 7.6 RC

Pull Request - State: closed - Opened by dwhswenson almost 4 years ago - 4 comments
Labels: misc PR, upstream changed

#1050 - add simstore table access via slice

Pull Request - State: closed - Opened by sroet almost 4 years ago - 5 comments
Labels: enhancement, experimental

#1049 - API 2.0: Improve parameters in existing code

Issue - State: open - Opened by dwhswenson almost 4 years ago - 4 comments
Labels: 2.0

#1048 - New path tree

Pull Request - State: closed - Opened by dwhswenson almost 4 years ago - 4 comments
Labels: enhancement, experimental

#1047 - Change ShootingPointAnalysisError to an Exception

Pull Request - State: closed - Opened by sroet almost 4 years ago - 2 comments
Labels: misc PR, 2.0

#1046 - Prevent errors in ShootingPointAnalysis with invalid (e.g., max length) trajectories

Pull Request - State: closed - Opened by sroet almost 4 years ago - 5 comments
Labels: bugfix

#1045 - Raise FileNotFoundError if sql backend tries to read a file that does not exist

Pull Request - State: closed - Opened by sroet almost 4 years ago - 2 comments
Labels: bugfix, experimental

#1044 - Fix syntax warning

Pull Request - State: closed - Opened by sroet almost 4 years ago - 1 comment
Labels: misc PR

#1043 - Update CI for OPS 2.0

Pull Request - State: closed - Opened by dwhswenson almost 4 years ago - 1 comment
Labels: misc PR, 2.0

#1042 - New `iter_generate` for OPS 2.0

Pull Request - State: open - Opened by dwhswenson about 4 years ago - 3 comments
Labels: API Break, 2.0

#1041 - [WIP] OpenMMToolsMCEngine

Pull Request - State: open - Opened by dwhswenson about 4 years ago - 2 comments
Labels: feature

#1040 - Moving in dihedral space

Issue - State: open - Opened by samarjeet about 4 years ago - 4 comments

#1039 - Bump version to 1.5.2.dev0

Pull Request - State: closed - Opened by dwhswenson about 4 years ago - 1 comment

#1038 - OpenPathSampling 1.5.1

Pull Request - State: closed - Opened by dwhswenson about 4 years ago - 2 comments

#1035 - Fix bug with SimStore CVs storing NumPy arrays

Pull Request - State: closed - Opened by dwhswenson about 4 years ago - 6 comments
Labels: bugfix, experimental

#1026 - [WIP] Analysis Filters

Pull Request - State: open - Opened by dwhswenson about 4 years ago - 13 comments
Labels: feature

#1001 - [WIP] Parallel committor with Dask

Pull Request - State: open - Opened by dwhswenson over 4 years ago
Labels: feature, experimental

#986 - API 2.0: Improve consistency

Issue - State: open - Opened by dwhswenson over 4 years ago - 6 comments
Labels: 2.0

#794 - snapshot modification: where is it taken into account for the acceptance?

Issue - State: closed - Opened by hejung almost 7 years ago - 5 comments

#787 - S-shooting

Pull Request - State: closed - Opened by singraber about 7 years ago - 7 comments
Labels: feature

#714 - Python 3 compatibility

Issue - State: closed - Opened by dwhswenson almost 8 years ago - 2 comments

#701 - hash function and proxies (this is complicated!)

Issue - State: closed - Opened by jhprinz almost 8 years ago - 8 comments
Labels: question