Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / openmm/pdbfixer issues and pull requests
#203 - Python API: Keep chain
Issue -
State: open - Opened by mirix over 4 years ago
- 4 comments
#202 - Problem with mmcif format
Issue -
State: closed - Opened by georopon over 4 years ago
- 2 comments
#201 - Residue number strange behavior
Issue -
State: open - Opened by MauriceKarrenbrock over 4 years ago
- 2 comments
#200 - Trying to create SystemGenerator from RDKit converted openff topology
Issue -
State: closed - Opened by tarungog over 4 years ago
- 3 comments
#199 - List of fixes for failing test cases
Issue -
State: open - Opened by zhang-ivy over 4 years ago
- 2 comments
#198 - [WIP] Improved method of selecting positions for added residues
Pull Request -
State: closed - Opened by peastman over 4 years ago
- 2 comments
#197 - Added option to save files in PDBx/mmCIF format
Pull Request -
State: closed - Opened by peastman over 4 years ago
#196 - Move to openmm org?
Issue -
State: closed - Opened by jchodera over 4 years ago
- 1 comment
#195 - output mmCIF doesn't distinguish ATOMs from HETATMs and _atom_site.label_asym_id is overwritten by _atom_site.auth_asym_id
Issue -
State: closed - Opened by MauriceKarrenbrock over 4 years ago
- 5 comments
#194 - Missing terminal oxygen after addMissingAtoms()
Issue -
State: closed - Opened by MauriceKarrenbrock over 4 years ago
- 17 comments
#193 - MMCIF _atom_site.pdbx_PDB_ins_code problem
Issue -
State: closed - Opened by MauriceKarrenbrock almost 5 years ago
- 3 comments
#192 - added Dockerfile; URL changed from `localhost` to `0.0.0.0`
Pull Request -
State: closed - Opened by ozzzzz almost 5 years ago
- 13 comments
#191 - maintain insertion codes
Pull Request -
State: closed - Opened by zhang-ivy almost 5 years ago
- 1 comment
#190 - Cannot find missing residues with "findMissingResidues"
Issue -
State: closed - Opened by luwei0917 almost 5 years ago
- 5 comments
#189 - Fixed exception loading PDBx/mmCIF files with missing blocks
Pull Request -
State: closed - Opened by peastman almost 5 years ago
#188 - PDBX/mmCIF reading error : asymIdCol = modData.getAttributeIndex('label_asym_id')
Issue -
State: closed - Opened by MauriceKarrenbrock almost 5 years ago
- 2 comments
#187 - Insertion codes not preserved in addMissingAtoms
Issue -
State: closed - Opened by zhang-ivy almost 5 years ago
- 3 comments
#186 - How to select a model?
Issue -
State: closed - Opened by Ruibin-Liu about 5 years ago
- 1 comment
#185 - Updated version number to 1.6
Pull Request -
State: closed - Opened by peastman about 5 years ago
#184 - Improved handling of insertion codes
Pull Request -
State: closed - Opened by peastman about 5 years ago
#183 - Fail to find missing residues on PDB retrieved from OPM database
Issue -
State: open - Opened by ajsilveira over 5 years ago
- 3 comments
#182 - Make the addition of SEQRES residues optional
Issue -
State: open - Opened by jiayeguo over 5 years ago
- 3 comments
#181 - wrong when install under CENTOS7
Issue -
State: open - Opened by guyujun almost 6 years ago
- 2 comments
#173 - best way to insert ACE/NME caps?
Issue -
State: open - Opened by nitroamos about 6 years ago
- 14 comments
#170 - More rigorous implementation of findMissingResidues needed (e.g., doesn't work for antibodies)
Issue -
State: open - Opened by nitroamos over 6 years ago
- 13 comments
#163 - Exception: Particle coordinate is nan in addMembrane
Issue -
State: open - Opened by nitroamos over 6 years ago
- 6 comments
#154 - Fail to find missing residues on PDB with insertion code
Issue -
State: closed - Opened by recamshak about 7 years ago
#153 - Issue with insertion codes
Issue -
State: closed - Opened by mikessh over 7 years ago
- 3 comments
#145 - N-terminal residue added with wrong chirality and/or a cis-peptide bond
Issue -
State: open - Opened by rafwiewiora over 7 years ago
- 29 comments
#27 - Test pdbfixer on entire PDB
Issue -
State: open - Opened by jchodera over 10 years ago
- 12 comments
#4 - Atom name dialects
Issue -
State: closed - Opened by rmcgibbo about 11 years ago
- 8 comments