openghg/openghg issues and pull requests

#789 - Profile meshbuilder with big mesh

Issue - State: closed - Opened by gareth-j over 1 year ago - 1 comment

#788 - Retrieving European Obspack data from ICOS CP - specifying files

Issue - State: closed - Opened by joe-pitt over 1 year ago - 1 comment
Labels: high-priority

#787 - Iss786 model scenario flux key

Pull Request - State: closed - Opened by brendan-m-murphy over 1 year ago - 2 comments

#786 - `ModelScenario.calc_modelled_obs` throws an error if 'source' or 'sources' isn't specified

Issue - State: closed - Opened by brendan-m-murphy over 1 year ago - 5 comments
Labels: bug, low-priority

#785 - `required_keys` and being more flexible

Issue - State: open - Opened by gareth-j over 1 year ago - 4 comments
Labels: question

#784 - Add processing of AGAGE NetCDF data and its export to dashboard

Pull Request - State: closed - Opened by gareth-j over 1 year ago - 4 comments
Labels: enhancement, storage-and-metadata, obs_dashboard

#783 - Fix the `openghg.standardise.standardise` docstring

Issue - State: open - Opened by gareth-j over 1 year ago - 1 comment
Labels: documentation, fine first issue

#782 - Ensure style guide documentation is complete

Issue - State: open - Opened by rt17603 over 1 year ago - 15 comments

#781 - Add standardisation script for processing of new AGAGE NetCDF format

Issue - State: closed - Opened by gareth-j over 1 year ago
Labels: enhancement, storage-and-metadata

#780 - Create date range class

Pull Request - State: closed - Opened by brendan-m-murphy over 1 year ago
Labels: enhancement

#779 - Iss728 update high time resolution to time resolved Phase 1

Pull Request - State: closed - Opened by SutarPrasad over 1 year ago - 2 comments

#778 - Have a look into sparse storage of the footprint data

Issue - State: open - Opened by gareth-j over 1 year ago - 3 comments
Labels: question, storage-and-metadata

#777 - Limit loading of large datasets

Issue - State: closed - Opened by gareth-j over 1 year ago - 1 comment

#776 - Added CHANGELOG.md to push paths-ignore

Pull Request - State: closed - Opened by brendan-m-murphy over 1 year ago

#775 - Update interface to `check_if_need_new_version`

Pull Request - State: closed - Opened by gareth-j over 1 year ago - 5 comments

#774 - Many versions of flux datasources created in ES_store

Issue - State: closed - Opened by brendan-m-murphy over 1 year ago - 6 comments
Labels: investigate

#773 - Change log fix-up

Pull Request - State: closed - Opened by brendan-m-murphy over 1 year ago

#772 - Enable multi-file export for dashboard

Pull Request - State: closed - Opened by gareth-j over 1 year ago - 2 comments
Labels: enhancement, obs_dashboard

#771 - Iss766, part 3: adding MetaStore class

Pull Request - State: closed - Opened by brendan-m-murphy over 1 year ago - 2 comments

#770 - Add `DeprecationWarning` to Cranfield and BTT processing functions

Issue - State: closed - Opened by gareth-j over 1 year ago
Labels: tidy

#769 - added environment-dev.yaml file

Pull Request - State: closed - Opened by SutarPrasad over 1 year ago - 2 comments
Labels: enhancement, help wanted

#768 - added black check in the CI before lint

Pull Request - State: closed - Opened by SutarPrasad over 1 year ago - 3 comments

#767 - Refactor via open metastore function

Pull Request - State: closed - Opened by brendan-m-murphy over 1 year ago - 10 comments

#766 - Split MetaStore class off of BaseStore

Issue - State: closed - Opened by brendan-m-murphy over 1 year ago
Labels: enhancement, tidy, refactor

#765 - Umbrella issue: short term solution for concurrency problem

Issue - State: closed - Opened by rt17603 over 1 year ago - 2 comments

#764 - When updating metastore, update temp version and then update metastore when finished

Issue - State: closed - Opened by rt17603 over 1 year ago - 7 comments
Labels: enhancement

#763 - Enable read-only opening of metastore

Pull Request - State: closed - Opened by gareth-j over 1 year ago - 1 comment
Labels: enhancement, storage-and-metadata

#762 - Stop writing out the metadata store on search

Issue - State: closed - Opened by gareth-j over 1 year ago
Labels: high-priority, storage-and-metadata

#761 - Remove the 2022 Code Retreat issue template

Pull Request - State: closed - Opened by gareth-j over 1 year ago

#760 - Updated standardise module, applied to tests

Pull Request - State: closed - Opened by brendan-m-murphy over 1 year ago - 5 comments

#759 - Splitted build and publish steps

Pull Request - State: closed - Opened by SutarPrasad over 1 year ago - 2 comments
Labels: enhancement, github_workflows

#758 - to_dashboard function updated to new format

Pull Request - State: open - Opened by SutarPrasad over 1 year ago - 2 comments
Labels: obs_dashboard

#757 - Configuration file for the object store

Issue - State: open - Opened by gareth-j over 1 year ago - 3 comments
Labels: enhancement, storage-and-metadata

#756 - Move to MongoDB for the metadata store

Issue - State: open - Opened by gareth-j over 1 year ago
Labels: enhancement, high-priority, storage-and-metadata

#755 - Iss749 add compression

Pull Request - State: closed - Opened by brendan-m-murphy over 1 year ago - 3 comments

#754 - data_manager not selecting by store

Issue - State: closed - Opened by joe-pitt over 1 year ago - 2 comments
Labels: bug

#753 - Log object store operations to an object store local file

Issue - State: open - Opened by gareth-j over 1 year ago - 1 comment
Labels: question

#752 - Make metadata store source of truth for Datasource UUIDs

Pull Request - State: closed - Opened by gareth-j over 1 year ago - 17 comments
Labels: enhancement

#751 - Make the metadata store the single source of truth for Datasource UUIDs

Issue - State: closed - Opened by gareth-j over 1 year ago
Labels: enhancement

#750 - Iss451 flux for mod mf bc

Pull Request - State: open - Opened by aliceramsden over 1 year ago - 3 comments
Labels: high-priority, analysis

#749 - Add compression to footprints while waiting for zarr

Issue - State: closed - Opened by brendan-m-murphy over 1 year ago

#748 - Handling concurrent/parallel writes to object store.

Issue - State: open - Opened by brendan-m-murphy over 1 year ago - 3 comments

#747 - Check if data to be added is the same as already stored

Issue - State: open - Opened by gareth-j over 1 year ago - 1 comment
Labels: enhancement

#746 - 0.6.2 release

Pull Request - State: closed - Opened by gareth-j over 1 year ago - 1 comment
Labels: release

#745 - Split out package build and upload steps

Issue - State: closed - Opened by gareth-j over 1 year ago

#744 - Add openghg conda channel

Pull Request - State: closed - Opened by gareth-j over 1 year ago
Labels: bugfix

#743 - Add OpenGHG channel, see if it runs correctly

Pull Request - State: closed - Opened by gareth-j over 1 year ago - 2 comments

#742 - Add check for different buckets having the same path in config

Issue - State: closed - Opened by gareth-j over 1 year ago
Labels: enhancement

#741 - Fix for bucket being saved to JSON

Pull Request - State: closed - Opened by gareth-j over 1 year ago - 2 comments
Labels: bugfix

#740 - Issue due to bucket being saved to object JSON

Issue - State: closed - Opened by gareth-j over 1 year ago
Labels: bug, high-priority

#739 - Pass `openghg` channel to the build process

Issue - State: closed - Opened by gareth-j over 1 year ago
Labels: bug

#738 - 0.6.1 release

Pull Request - State: closed - Opened by gareth-j over 1 year ago - 1 comment

#737 - Remove or tidy the `notebooks` folder

Issue - State: closed - Opened by gareth-j over 1 year ago
Labels: documentation, question

#736 - `Datasource` logger object store output

Issue - State: open - Opened by gareth-j over 1 year ago - 1 comment
Labels: question

#735 - Remove visualise_store

Pull Request - State: closed - Opened by SutarPrasad over 1 year ago - 2 comments

#734 - Update README link to point to repo

Pull Request - State: closed - Opened by gareth-j over 1 year ago - 1 comment

#733 - Remove link to `hugs-cloud.com`

Issue - State: closed - Opened by gareth-j over 1 year ago
Labels: bug, documentation

#732 - Iss727 refactor basestore children

Pull Request - State: closed - Opened by brendan-m-murphy over 1 year ago

#731 - Conda/Mamba for CI build

Pull Request - State: closed - Opened by SutarPrasad over 1 year ago - 4 comments
Labels: github_workflows

#730 - added python 3.11

Pull Request - State: closed - Opened by SutarPrasad over 1 year ago

#729 - get_readable_buckets now checks for tutorial store

Pull Request - State: closed - Opened by brendan-m-murphy over 1 year ago - 1 comment

#728 - Update "high_time_resolution" naming to be "time_resolved"

Issue - State: closed - Opened by rt17603 over 1 year ago
Labels: low-priority, tidy

#727 - Reduce repeated code for child classes of BaseStore

Issue - State: open - Opened by brendan-m-murphy over 1 year ago - 14 comments
Labels: tidy, refactor

#726 - Check lifetime and whether this is short when adding footprint for a given species

Issue - State: open - Opened by brendan-m-murphy over 1 year ago - 1 comment
Labels: enhancement, fine first issue

#725 - Fix for object_store not being present in Datasource metadata

Pull Request - State: closed - Opened by gareth-j over 1 year ago - 2 comments
Labels: bugfix

#724 - `Datasource.save()` updates the data version each time it's called

Issue - State: closed - Opened by gareth-j over 1 year ago - 3 comments
Labels: bug

#723 - Remove `object_store` from Datasource metadata

Issue - State: closed - Opened by gareth-j over 1 year ago - 2 comments
Labels: question

#722 - Storage suggestions

Pull Request - State: closed - Opened by gareth-j over 1 year ago - 1 comment

#721 - Dashboard export functions

Issue - State: open - Opened by gareth-j over 1 year ago
Labels: enhancement, dashboard

#720 - Iss683 hi t res retrieval

Pull Request - State: closed - Opened by brendan-m-murphy over 1 year ago - 5 comments

#719 - Add `black` check to the CI

Issue - State: closed - Opened by gareth-j over 1 year ago
Labels: fine first issue

#718 - Iss 686 replaced tqdm to rich package progress bar

Pull Request - State: closed - Opened by SutarPrasad over 1 year ago - 3 comments

#717 - Footprints - metadata ideas

Pull Request - State: closed - Opened by gareth-j over 1 year ago - 1 comment

#716 - Sort imports using `isort` and format codebase using `black`

Pull Request - State: closed - Opened by gareth-j over 1 year ago - 1 comment

#715 - Import and formatting issues

Issue - State: closed - Opened by gareth-j over 1 year ago - 1 comment
Labels: tidy

#714 - Import and formatting issues

Issue - State: closed - Opened by gareth-j over 1 year ago - 1 comment

#713 - Fix for string being interpreted as list on key delete in DataManager

Pull Request - State: closed - Opened by gareth-j over 1 year ago - 3 comments
Labels: bugfix

#712 - `DataManager` doesn't handle deletion of metadata keys properly when given a string

Issue - State: closed - Opened by gareth-j over 1 year ago
Labels: bug

#711 - Update search to add in object store data for backwards compatibility

Pull Request - State: closed - Opened by gareth-j over 1 year ago - 2 comments
Labels: bugfix

#710 - First pass at metadata migration tool

Pull Request - State: closed - Opened by gareth-j over 1 year ago - 1 comment

#709 - `object_store` key not present in metadata of older object stores

Issue - State: closed - Opened by gareth-j over 1 year ago
Labels: bug

#708 - Ensure usage of metadata when storing data is consistent

Issue - State: open - Opened by rt17603 over 1 year ago - 6 comments
Labels: tidy, umbrella

#707 - OpenGHG 0.6.0 Release

Pull Request - State: closed - Opened by gareth-j over 1 year ago - 3 comments

#706 - Need to determine how best to interact with openghg_defs (previously supplementary_info)

Issue - State: open - Opened by rt17603 over 1 year ago
Labels: question, openghg_defs

#705 - Move to mamba for conda package building

Issue - State: closed - Opened by gareth-j over 1 year ago
Labels: enhancement

#704 - Update `ModelScenario` to pull from different object stores

Issue - State: open - Opened by gareth-j over 1 year ago - 1 comment
Labels: bug, analysis

#703 - Move to mamba build

Pull Request - State: closed - Opened by gareth-j over 1 year ago - 2 comments

#702 - Iss701 - Fix lowercasing of metadata causing object store lookup issues

Pull Request - State: closed - Opened by gareth-j over 1 year ago - 4 comments
Labels: bugfix

#701 - upper case letters can't be used in paths to object stores

Issue - State: closed - Opened by aliceramsden over 1 year ago
Labels: bug

#700 - Add Python 3.11 to our CI pipeline

Issue - State: closed - Opened by gareth-j over 1 year ago
Labels: enhancement, fine first issue

#699 - Create an `environment-dev.yaml` file

Issue - State: closed - Opened by gareth-j over 1 year ago
Labels: fine first issue

#698 - Iss686 logger update

Pull Request - State: closed - Opened by rt17603 over 1 year ago - 1 comment

#697 - Iss693 tutorial typos

Pull Request - State: closed - Opened by brendan-m-murphy over 1 year ago - 2 comments

#696 - 432 update searchresults for pretty console output

Pull Request - State: closed - Opened by SutarPrasad over 1 year ago - 1 comment
Labels: enhancement

#695 - Object store lockfile

Issue - State: closed - Opened by gareth-j over 1 year ago - 6 comments
Labels: enhancement, storage-and-metadata

#694 - How do we want `get_bucket` to behave?

Issue - State: open - Opened by gareth-j over 1 year ago - 1 comment
Labels: question

#693 - Tutorial typos and formatting fixes

Issue - State: closed - Opened by brendan-m-murphy over 1 year ago - 5 comments
Labels: documentation

#692 - updated indentation as per its mention in the issue.

Pull Request - State: closed - Opened by SutarPrasad over 1 year ago
Labels: bugfix

#691 - Unpinned pandas

Pull Request - State: closed - Opened by brendan-m-murphy over 1 year ago

#690 - Iss679 config path

Pull Request - State: closed - Opened by brendan-m-murphy over 1 year ago - 3 comments

GitHub / openghg/openghg issues and pull requests