opencb/bionetdb issues and pull requests

#22 - Added proper tests for the methods of Neo4JNetworkDBAdaptor class

Pull Request - State: closed - Opened by pfurio over 9 years ago

#21 - Tests for Neo4JNetworkAdapter

Issue - State: closed - Opened by pfurio over 9 years ago
Labels: enhancement

#20 - Implemented option to import expression data. This closes #9.

Pull Request - State: closed - Opened by pfurio over 9 years ago

#20 - Implemented option to import expression data. This closes #9.

Pull Request - State: closed - Opened by pfurio over 9 years ago

#19 - BioPaxParser: Evidence is not retrieved correctly

Issue - State: closed - Opened by dapregi over 9 years ago
Labels: bug, enhancement, feature

#19 - BioPaxParser: Evidence is not retrieved correctly

Issue - State: closed - Opened by dapregi over 9 years ago
Labels: bug, enhancement, feature

#18 - Parse data

Issue - State: closed - Opened by pfurio over 9 years ago
Labels: enhancement

#17 - PSI-MI TAB parser implementation

Issue - State: closed - Opened by dapregi over 9 years ago
Labels: feature

#17 - PSI-MI TAB parser implementation

Issue - State: closed - Opened by dapregi over 9 years ago
Labels: feature

#16 - Create class to store cellular location info

Issue - State: closed - Opened by dapregi over 9 years ago
Labels: enhancement, feature

#16 - Create class to store cellular location info

Issue - State: closed - Opened by dapregi over 9 years ago
Labels: enhancement, feature

#15 - Put altNames and altIds attributes into xref

Issue - State: closed - Opened by dapregi over 9 years ago
Labels: enhancement

#15 - Put altNames and altIds attributes into xref

Issue - State: closed - Opened by dapregi over 9 years ago
Labels: enhancement

#14 - Added code to ensure that the same node or interaction

Pull Request - State: closed - Opened by pfurio over 9 years ago

#14 - Added code to ensure that the same node or interaction

Pull Request - State: closed - Opened by pfurio over 9 years ago

#14 - Added code to ensure that the same node or interaction

Pull Request - State: closed - Opened by pfurio over 9 years ago

#13 - SbmlParser: creation of catalysis interaction

Issue - State: closed - Opened by dapregi over 9 years ago

#13 - SbmlParser: creation of catalysis interaction

Issue - State: closed - Opened by dapregi over 9 years ago

#13 - SbmlParser: creation of catalysis interaction

Issue - State: closed - Opened by dapregi over 9 years ago

#12 - SbmlParser: participant of interactions

Issue - State: closed - Opened by dapregi over 9 years ago
Labels: feature

#12 - SbmlParser: participant of interactions

Issue - State: closed - Opened by dapregi over 9 years ago
Labels: feature

#12 - SbmlParser: participant of interactions

Issue - State: closed - Opened by dapregi over 9 years ago
Labels: feature

#11 - SbmlParser Complexes info

Issue - State: closed - Opened by dapregi over 9 years ago
Labels: enhancement, feature

#11 - SbmlParser Complexes info

Issue - State: closed - Opened by dapregi over 9 years ago
Labels: enhancement, feature

#11 - SbmlParser Complexes info

Issue - State: closed - Opened by dapregi over 9 years ago
Labels: enhancement, feature

#10 - Add tests to check for idempotence behaviour when adding networks

Issue - State: closed - Opened by pfurio over 9 years ago - 1 comment

#10 - Add tests to check for idempotence behaviour when adding networks

Issue - State: closed - Opened by pfurio over 9 years ago - 1 comment

#9 - Add option to insert expression data

Issue - State: closed - Opened by pfurio over 9 years ago

#9 - Add option to insert expression data

Issue - State: closed - Opened by pfurio over 9 years ago

#8 - A test for SbmlParser is needed

Issue - State: closed - Opened by dapregi over 9 years ago
Labels: test

#8 - A test for SbmlParser is needed

Issue - State: closed - Opened by dapregi over 9 years ago
Labels: test

#7 - xref annotation file parser

Issue - State: closed - Opened by dapregi over 9 years ago
Labels: feature

#7 - xref annotation file parser

Issue - State: closed - Opened by dapregi over 9 years ago
Labels: feature

#6 - SbmlParser implementation

Issue - State: closed - Opened by dapregi over 9 years ago
Labels: feature

#6 - SbmlParser implementation

Issue - State: closed - Opened by dapregi over 9 years ago
Labels: feature

#6 - SbmlParser implementation

Issue - State: closed - Opened by dapregi over 9 years ago
Labels: feature

#5 - SBML parser needs .so C lib in the path

Issue - State: closed - Opened by imedina over 9 years ago
Labels: bug, feature

#5 - SBML parser needs .so C lib in the path

Issue - State: closed - Opened by imedina over 9 years ago
Labels: bug, feature

#4 - Insertion of nodes & interactions. Annotation of Xrefs. Some tests added.

Pull Request - State: closed - Opened by pfurio over 9 years ago

#4 - Insertion of nodes & interactions. Annotation of Xrefs. Some tests added.

Pull Request - State: closed - Opened by pfurio over 9 years ago

#3 - Able to add nodes to the database.

Pull Request - State: closed - Opened by pfurio over 9 years ago
Labels: feature

#3 - Able to add nodes to the database.

Pull Request - State: closed - Opened by pfurio over 9 years ago
Labels: feature

#2 - A test for BioPaxParser is needed

Issue - State: open - Opened by imedina over 9 years ago
Labels: test

#2 - A test for BioPaxParser is needed

Issue - State: open - Opened by imedina over 9 years ago
Labels: test

#1 - Gzipped files should be accepted

Issue - State: closed - Opened by imedina over 9 years ago
Labels: feature

#1 - Gzipped files should be accepted

Issue - State: closed - Opened by imedina over 9 years ago
Labels: feature

GitHub / opencb/bionetdb issues and pull requests