Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / open-AIMS/bayesnec issues and pull requests

#156 - Update ecx

Pull Request - State: open - Opened by beckyfisher 10 months ago

#155 - fix test setup to work with the latest brms

Pull Request - State: open - Opened by paul-buerkner 11 months ago

#154 - Plots not displaying in the pkgdown website

Issue - State: closed - Opened by padpadpadpad about 1 year ago - 1 comment

#153 - Precision

Pull Request - State: closed - Opened by beckyfisher over 1 year ago - 1 comment

#152 - Precision

Pull Request - State: closed - Opened by beckyfisher over 1 year ago

#151 - Beta binomial

Pull Request - State: closed - Opened by beckyfisher over 1 year ago

#150 - xform in autoplot does not behave as expected for binomial

Issue - State: closed - Opened by beckyfisher over 1 year ago
Labels: bug

#148 - Add more diagnostic methods and tests for bayesnecfit objects

Issue - State: open - Opened by beckyfisher over 1 year ago - 1 comment

#147 - All edits to nsec and minor correciton to vignettes

Pull Request - State: closed - Opened by beckyfisher over 1 year ago

#146 - Revert "Expand nsec"

Pull Request - State: closed - Opened by beckyfisher over 1 year ago

#145 - Expand nsec

Pull Request - State: closed - Opened by beckyfisher over 1 year ago

#144 - Remove endpoint

Pull Request - State: closed - Opened by beckyfisher over 1 year ago

#143 - ECx type abolsute does not behave as described in the help file

Issue - State: closed - Opened by beckyfisher over 1 year ago - 1 comment

#141 - Function get priors

Issue - State: open - Opened by beckyfisher over 1 year ago

#140 - add native beta_binomial family

Issue - State: closed - Opened by beckyfisher almost 2 years ago
Labels: enhancement

#139 - Add NEC models from drc

Issue - State: open - Opened by beckyfisher almost 2 years ago
Labels: enhancement

#138 - Dev

Pull Request - State: closed - Opened by beckyfisher almost 2 years ago

#137 - fix rhat generic-method conflict

Pull Request - State: closed - Opened by paul-buerkner almost 2 years ago - 1 comment

#136 - Support for `rate` aterm would be really useful for Poisson and Negbinom families

Issue - State: open - Opened by jsture almost 2 years ago - 1 comment

#135 - Check all functions work with cmdstanr backend

Issue - State: closed - Opened by beckyfisher almost 2 years ago - 1 comment

#134 - Dev

Pull Request - State: closed - Opened by beckyfisher about 2 years ago
Labels: bug

#133 - provide information on failed models

Issue - State: open - Opened by beckyfisher about 2 years ago
Labels: enhancement

#132 - Reorganise functions

Issue - State: closed - Opened by dbarneche about 2 years ago
Labels: documentation, enhancement

#131 - Add examples to all exported methods/generics

Issue - State: closed - Opened by dbarneche about 2 years ago
Labels: enhancement

#130 - Provide examples for `bnec_newdata`

Issue - State: closed - Opened by dbarneche about 2 years ago
Labels: documentation

#129 - Provide examples for `predict` and `posterior_*` methods

Issue - State: closed - Opened by dbarneche about 2 years ago
Labels: documentation

#128 - The need for `precision` as an attribute in `ecx`, `nsec`, etc outputs

Issue - State: closed - Opened by dbarneche about 2 years ago - 1 comment
Labels: question

#127 - Standardise output names among functions ecx, nec, nsec

Issue - State: closed - Opened by dbarneche about 2 years ago - 1 comment
Labels: enhancement

#126 - Implement new tests for predict et al. methods

Issue - State: closed - Opened by dbarneche about 2 years ago - 1 comment
Labels: enhancement

#125 - test-nsec.R unexpected original code

Issue - State: closed - Opened by dbarneche about 2 years ago - 1 comment
Labels: bug, question

#124 - Consider replacing `%>%` for new native `|>`

Issue - State: closed - Opened by dbarneche about 2 years ago
Labels: enhancement

#123 - Thorough check of functions dependencies

Issue - State: closed - Opened by dbarneche about 2 years ago - 1 comment
Labels: bug

#122 - Message when concantenating models of the same fit

Issue - State: closed - Opened by beckyfisher about 2 years ago - 2 comments
Labels: documentation

#121 - validate_priors code logic

Issue - State: closed - Opened by beckyfisher about 2 years ago - 1 comment
Labels: bug

#119 - `predict` method needs to be broken down into multiple functions

Issue - State: closed - Opened by dbarneche about 2 years ago
Labels: bug, documentation, enhancement

#118 - Should we allow merging of bnec-generated objects with different x/y transformations?

Issue - State: closed - Opened by dbarneche about 2 years ago
Labels: question

#117 - Standardise `xform` default values + checks across functions that have it

Issue - State: closed - Opened by dbarneche about 2 years ago - 1 comment
Labels: bug

#116 - get rid of `ifelse` statement related to `xform` in plot

Issue - State: closed - Opened by dbarneche about 2 years ago - 1 comment
Labels: bug

#115 - Is `force_x` truly needed in plot?

Issue - State: closed - Opened by dbarneche about 2 years ago
Labels: bug

#114 - investigate how to combine help files into one

Issue - State: closed - Opened by dbarneche about 2 years ago
Labels: documentation, enhancement

#113 - Argument xform in autoplot does not behave as expected

Issue - State: closed - Opened by beckyfisher about 2 years ago - 1 comment
Labels: bug

#112 - Add axis label to check_chains()

Issue - State: closed - Opened by beckyfisher over 2 years ago - 1 comment

#111 - Strip _Intercept frm summary output

Issue - State: closed - Opened by beckyfisher over 2 years ago

#110 - Proof read man pages.

Issue - State: closed - Opened by beckyfisher over 2 years ago

#109 - Provide additional error checking to exported functions

Issue - State: closed - Opened by beckyfisher over 2 years ago - 1 comment
Labels: enhancement

#108 - Add method to extract brms object

Issue - State: closed - Opened by beckyfisher over 2 years ago - 1 comment
Labels: enhancement

#107 - Add seed to all model calls in vignettes

Issue - State: closed - Opened by dbarneche over 2 years ago - 1 comment
Labels: documentation, enhancement

#106 - Summary returning wrong Data name

Issue - State: closed - Opened by dbarneche over 2 years ago
Labels: bug

#105 - c(mod, mod) returning error

Issue - State: closed - Opened by dbarneche over 2 years ago
Labels: bug, enhancement

#104 - add zero-inflated Poisson/negative binomial distributions

Issue - State: open - Opened by pkoaz over 2 years ago - 1 comment

#103 - Dev

Pull Request - State: closed - Opened by beckyfisher over 2 years ago

#102 - Issues with next version of ggplot2

Issue - State: closed - Opened by thomasp85 over 2 years ago - 3 comments

#101 - Explore priors

Pull Request - State: closed - Opened by beckyfisher over 2 years ago

#100 - Revert "Explore priors"

Pull Request - State: closed - Opened by beckyfisher over 2 years ago

#99 - Explore priors

Pull Request - State: closed - Opened by beckyfisher over 2 years ago - 1 comment

#98 - Dev

Pull Request - State: closed - Opened by dbarneche almost 3 years ago

#97 - Remove tests that fail in the new brms version

Pull Request - State: closed - Opened by paul-buerkner almost 3 years ago - 2 comments

#96 - Dev

Pull Request - State: closed - Opened by dbarneche almost 3 years ago

#95 - ecx_incline model set for drug discovery

Issue - State: closed - Opened by jsture almost 3 years ago

#94 - Added new model set 'hormesis'

Issue - State: closed - Opened by beckyfisher over 3 years ago - 1 comment

#93 - Auto-correct when check_data applies shifts from 0 and 1

Issue - State: open - Opened by beckyfisher over 3 years ago - 2 comments

#92 - Model set excluidng necsigm

Issue - State: closed - Opened by beckyfisher over 3 years ago

#91 - 2.0.2 fixes

Pull Request - State: closed - Opened by dbarneche over 3 years ago

#90 - CRAN test failures on Linux and Windows

Issue - State: closed - Opened by dbarneche over 3 years ago

#89 - Update check_data resp_check to use quantiles

Issue - State: closed - Opened by beckyfisher over 3 years ago - 2 comments
Labels: bug, enhancement

#87 - Dev

Pull Request - State: closed - Opened by dbarneche over 3 years ago

#86 - Dev 2.0

Pull Request - State: closed - Opened by dbarneche over 3 years ago

#85 - Poisson model produces error

Issue - State: closed - Opened by beckyfisher over 3 years ago
Labels: bug

#84 - Consider adding an argument to fix parameter values in models

Issue - State: open - Opened by darrenkoppel over 3 years ago - 4 comments

#83 - amend should be extended to bayesnecfit class

Issue - State: open - Opened by dbarneche over 3 years ago

#82 - c method for bayesnec and bayesmanec

Issue - State: closed - Opened by beckyfisher over 3 years ago
Labels: enhancement

#81 - summary method edits

Issue - State: closed - Opened by beckyfisher over 3 years ago

#80 - Par issue woth base plot method

Issue - State: closed - Opened by beckyfisher over 3 years ago - 1 comment
Labels: bug

#79 - Struggling to generate initial values when probabilities are low

Issue - State: open - Opened by dbarneche over 3 years ago
Labels: enhancement

#78 - Update to formula syntax all vignettes

Issue - State: closed - Opened by beckyfisher over 3 years ago - 1 comment

#77 - Allow transformations in formula syntax

Issue - State: closed - Opened by beckyfisher over 3 years ago - 1 comment

#76 - Update news

Issue - State: closed - Opened by beckyfisher over 3 years ago - 1 comment

#75 - Make identity link default behaviour + warning when link functions are used

Issue - State: closed - Opened by dbarneche over 3 years ago - 1 comment

#74 - examples in compare_endpoints are taking > 5s elapsed time

Issue - State: closed - Opened by dbarneche over 3 years ago - 1 comment

#73 - Add dryrun to fit_bayesnec

Issue - State: closed - Opened by dbarneche over 3 years ago - 1 comment

#72 - Add na.action to bnec

Issue - State: closed - Opened by beckyfisher over 3 years ago - 2 comments

#71 - Consider adding weights to bnec

Issue - State: closed - Opened by beckyfisher over 3 years ago - 1 comment

#70 - Remove use of class(x)!="list"

Issue - State: closed - Opened by beckyfisher over 3 years ago
Labels: enhancement

#69 - Default args to amend

Issue - State: closed - Opened by beckyfisher over 3 years ago - 1 comment
Labels: bug

#68 - Updates to documentation for validate_priors

Issue - State: closed - Opened by beckyfisher over 3 years ago
Labels: bug

#67 - autoplot()

Issue - State: closed - Opened by beckyfisher over 3 years ago
Labels: enhancement

#66 - Checks to bnec input arguments

Issue - State: closed - Opened by beckyfisher over 3 years ago - 1 comment
Labels: enhancement

#65 - Add additional interfaces

Issue - State: closed - Opened by beckyfisher over 3 years ago - 1 comment
Labels: enhancement

#64 - Add a formula method for bnec

Issue - State: closed - Opened by beckyfisher over 3 years ago - 1 comment
Labels: enhancement

#63 - Allow dispersion estimates across all families

Issue - State: closed - Opened by beckyfisher over 3 years ago
Labels: enhancement

#62 - Include bayesian R in summary out

Issue - State: closed - Opened by beckyfisher over 3 years ago
Labels: enhancement

#61 - Host example fits for function examples and tests online

Issue - State: closed - Opened by dbarneche over 3 years ago - 1 comment
Labels: enhancement

#59 - Add custom family ordered beta to accomodate bounded data

Issue - State: closed - Opened by beckyfisher over 3 years ago - 1 comment
Labels: enhancement

#58 - Update step function with inverse logit trick

Issue - State: closed - Opened by beckyfisher over 3 years ago - 1 comment
Labels: enhancement

#57 - Random effects

Pull Request - State: closed - Opened by beckyfisher over 3 years ago

#56 - Add model validation plotting methods

Issue - State: open - Opened by beckyfisher over 3 years ago
Labels: enhancement