ome/pydoop-features issues and pull requests

#58 - Require OMERO 5.3 for compatibility with IDR

Pull Request - State: closed - Opened by manics almost 7 years ago - 1 comment

#57 - Build docker in travis

Issue - State: open - Opened by joshmoore about 7 years ago

#56 - Negative offsets

Pull Request - State: closed - Opened by manics about 7 years ago - 10 comments

#55 - Add pretty-printed json as a dump format

Pull Request - State: closed - Opened by manics about 7 years ago - 3 comments

#54 - Fix ansible role dependency versions

Pull Request - State: closed - Opened by manics about 7 years ago - 3 comments

#53 - Delete old docker setup

Pull Request - State: closed - Opened by simleo over 7 years ago - 3 comments

#52 - pyfeatures calc: allow to filter by ZCT coords

Pull Request - State: closed - Opened by simleo over 7 years ago - 3 comments

#51 - Update docker/standalone

Pull Request - State: closed - Opened by simleo over 7 years ago - 4 comments

#50 - Add summarize app

Pull Request - State: closed - Opened by simleo over 7 years ago - 1 comment

#49 - Add create_h5_index.py from idr-metadata

Pull Request - State: closed - Opened by manics over 7 years ago - 5 comments

#48 - Add args for manipulating avro name matches against omero

Pull Request - State: closed - Opened by manics over 7 years ago - 5 comments

#47 - Add arguments to specify initial tile offset

Pull Request - State: closed - Opened by manics over 7 years ago - 3 comments

#46 - Cleanup docker image

Pull Request - State: closed - Opened by joshmoore over 7 years ago - 8 comments

#45 - Cleanup docker image

Pull Request - State: closed - Opened by joshmoore over 7 years ago

#44 - Update copyright

Pull Request - State: closed - Opened by simleo over 7 years ago - 3 comments

#43 - BioImgFactory: filter indices in writeSeries

Issue - State: open - Opened by simleo about 8 years ago
Labels: enhancement

#42 - Allow to set Java logging level from the CLI

Issue - State: open - Opened by simleo about 8 years ago - 2 comments
Labels: enhancement

#41 - Fix logging

Pull Request - State: closed - Opened by simleo about 8 years ago - 2 comments

#40 - Expand ImageToAvroTest

Issue - State: open - Opened by simleo about 8 years ago
Labels: enhancement

#39 - Add test for ImageToAvro

Pull Request - State: closed - Opened by simleo about 8 years ago

#38 - Fix serialize default case

Pull Request - State: closed - Opened by simleo about 8 years ago

#37 - Run checkstyle on unit tests

Pull Request - State: closed - Opened by simleo about 8 years ago

#36 - Test serialization of plane subsets

Pull Request - State: closed - Opened by simleo about 8 years ago

#35 - Add options to serialize a subset of planes

Pull Request - State: closed - Opened by manics about 8 years ago - 9 comments

#34 - Cleanup test/integration

Pull Request - State: closed - Opened by simleo about 8 years ago

#33 - Add support for pyavroc I/O to omerofeatures

Pull Request - State: closed - Opened by simleo about 8 years ago - 1 comment

#32 - Conversion script for avro to OMERO.features

Pull Request - State: closed - Opened by manics over 8 years ago - 3 comments

#31 - Add script for mapping Bio-Formats series to OMERO ids

Pull Request - State: closed - Opened by simleo over 8 years ago

#30 - Add Ubuntu-based Docker image

Issue - State: open - Opened by simleo over 8 years ago
Labels: enhancement

#29 - Run tests with pyavroc as the Avro implementation

Pull Request - State: closed - Opened by simleo over 8 years ago

#28 - Add Pandas DataFrame as a conversion format

Issue - State: open - Opened by simleo over 8 years ago
Labels: enhancement

#27 - Add options to set the x and y distances between tiles

Pull Request - State: closed - Opened by simleo over 8 years ago

#26 - Fix plot bugs

Pull Request - State: closed - Opened by simleo over 8 years ago

#25 - Proper logging

Pull Request - State: closed - Opened by simleo over 8 years ago

#24 - bugs in plot.py

Issue - State: closed - Opened by simleo over 8 years ago
Labels: bug

#23 - Travis build

Pull Request - State: closed - Opened by simleo over 8 years ago

#22 - setup.py: misleading message when mvn is not available

Issue - State: open - Opened by simleo over 8 years ago
Labels: bug

#21 - Plot features

Pull Request - State: closed - Opened by simleo over 8 years ago

#20 - Add grid engine scripts

Pull Request - State: closed - Opened by simleo over 8 years ago

#19 - Docker update

Pull Request - State: closed - Opened by simleo over 8 years ago

#18 - Single entry point

Pull Request - State: closed - Opened by simleo over 8 years ago

#17 - Revert "Single entry point"

Pull Request - State: closed - Opened by simleo over 8 years ago

#16 - Single entry point

Pull Request - State: closed - Opened by simleo over 8 years ago - 1 comment

#15 - Docker updates

Pull Request - State: closed - Opened by simleo over 8 years ago - 1 comment

#14 - ImageToAvro: wrap reader with Memoizer

Issue - State: closed - Opened by simleo over 8 years ago - 1 comment
Labels: enhancement

#13 - Docker: non-privileged user

Issue - State: closed - Opened by simleo over 8 years ago - 1 comment
Labels: enhancement

#12 - Plot tiling stats

Pull Request - State: closed - Opened by simleo over 8 years ago - 1 comment

#11 - Add script to compare different tile sizes

Pull Request - State: closed - Opened by simleo over 8 years ago

#10 - Docker: create shallow clones when installing dependencies

Issue - State: closed - Opened by simleo over 8 years ago - 1 comment
Labels: enhancement

#9 - Add SZCT indices to output record

Pull Request - State: closed - Opened by simleo over 8 years ago

#8 - Allow overlapping tiles

Issue - State: closed - Opened by simleo over 8 years ago - 2 comments
Labels: enhancement

#7 - Add a tiling option to calc_features

Pull Request - State: closed - Opened by simleo over 8 years ago

#6 - Add Z projection

Issue - State: open - Opened by simleo over 8 years ago - 1 comment
Labels: enhancement

#5 - Store each feature sub-vector in a separate field

Pull Request - State: closed - Opened by simleo over 8 years ago

#4 - Calc features on non-overlapping 200x200 tiles

Pull Request - State: closed - Opened by colettace over 8 years ago - 6 comments

#3 - Add RGB support

Pull Request - State: closed - Opened by simleo over 8 years ago

#2 - Docker image for standalone mode

Pull Request - State: closed - Opened by simleo over 8 years ago

#1 - Changed features.py to use latest wnd-charm 0.9.10 API

Pull Request - State: closed - Opened by colettace over 8 years ago - 2 comments

GitHub / ome/pydoop-features issues and pull requests