Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / ome/omero-cli-zarr issues and pull requests
#163 - Issues with zarr python package >3
Issue -
State: open - Opened by JensWendt 4 days ago
#162 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: open - Opened by pre-commit-ci[bot] 2 months ago
#161 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] 6 months ago
#160 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] 7 months ago
#159 - scm version fix
Pull Request -
State: closed - Opened by will-moore 9 months ago
- 8 comments
#158 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] 9 months ago
#157 - Pixel type fix
Pull Request -
State: closed - Opened by will-moore 10 months ago
- 5 comments
#156 - Use versioneer for tagging (Fix #154)
Pull Request -
State: closed - Opened by joshmoore 10 months ago
- 14 comments
#155 - Flake8 fix, don't import input
Pull Request -
State: closed - Opened by will-moore 10 months ago
- 2 comments
#154 - ModuleNotFoundError: No module named 'omero_zarr._version'
Issue -
State: open - Opened by will-moore 10 months ago
- 10 comments
#153 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] 11 months ago
#152 - Remove `args` parameter from top-level functions
Issue -
State: open - Opened by will-moore about 1 year ago
#151 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] about 1 year ago
#150 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] about 1 year ago
#149 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] about 1 year ago
#148 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] about 1 year ago
#147 - Name option
Pull Request -
State: open - Opened by will-moore about 1 year ago
- 7 comments
#146 - Fix path/to/image when exporting Plate images
Pull Request -
State: closed - Opened by will-moore over 1 year ago
- 1 comment
#145 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] over 1 year ago
#144 - Use correct dimension_separator when downsampling
Pull Request -
State: closed - Opened by will-moore over 1 year ago
- 2 comments
#143 - Remove np.bool alias
Pull Request -
State: closed - Opened by will-moore over 1 year ago
- 9 comments
#142 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] over 1 year ago
#141 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] over 1 year ago
#140 - Add copyright headers to python files
Pull Request -
State: closed - Opened by will-moore over 1 year ago
- 4 comments
#139 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] over 1 year ago
#138 - Replace print statements with logging
Issue -
State: open - Opened by joshmoore over 1 year ago
#137 - Upgrade action
Pull Request -
State: closed - Opened by jburel over 1 year ago
#136 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] over 1 year ago
#135 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] over 1 year ago
#134 - Big images
Pull Request -
State: closed - Opened by will-moore over 1 year ago
- 13 comments
#133 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] over 1 year ago
#132 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] almost 2 years ago
#131 - Fix units -> unit
Pull Request -
State: closed - Opened by will-moore almost 2 years ago
- 3 comments
#130 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] almost 2 years ago
#129 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] about 2 years ago
#128 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] about 2 years ago
#127 - Installation instructions
Issue -
State: open - Opened by will-moore about 2 years ago
#126 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] about 2 years ago
#125 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] about 2 years ago
#124 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] about 2 years ago
#123 - Support export of Fileset:ID
Pull Request -
State: open - Opened by will-moore about 2 years ago
- 35 comments
#122 - export bioformats2raw.layout for Fileset or Images
Issue -
State: open - Opened by will-moore about 2 years ago
#121 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] about 2 years ago
#120 - add --allow_overlaps arg to cli
Pull Request -
State: closed - Opened by will-moore over 2 years ago
- 11 comments
#119 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] over 2 years ago
#118 - Allow to use bioformats2raw to export HCS data
Pull Request -
State: closed - Opened by sbesson over 2 years ago
#117 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] over 2 years ago
#116 - Choose smallest np.dtype that handles labels data
Pull Request -
State: closed - Opened by will-moore over 2 years ago
- 3 comments
#115 - labels exported as dtype i8
Issue -
State: closed - Opened by will-moore over 2 years ago
- 1 comment
#114 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] over 2 years ago
#113 - bioformats2raw 0.5.0 upgrade and specification compatibility
Issue -
State: open - Opened by sbesson over 2 years ago
- 1 comment
#112 - Add --bfpath option
Pull Request -
State: closed - Opened by joshmoore over 2 years ago
- 5 comments
#111 - `zarr export` doesn't support big images
Issue -
State: closed - Opened by joshmoore over 2 years ago
- 3 comments
#110 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] over 2 years ago
#109 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] over 2 years ago
#108 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] over 2 years ago
- 1 comment
#107 - Use of write_multiscale_labels for image
Pull Request -
State: closed - Opened by will-moore over 2 years ago
- 6 comments
#106 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] over 2 years ago
#105 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] over 2 years ago
#104 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] over 2 years ago
#103 - Scale dict
Pull Request -
State: closed - Opened by will-moore over 2 years ago
- 2 comments
#102 - Zarr export tests
Pull Request -
State: open - Opened by will-moore over 2 years ago
- 26 comments
#101 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] over 2 years ago
#100 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] almost 3 years ago
#99 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] almost 3 years ago
#98 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] almost 3 years ago
#97 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] almost 3 years ago
#96 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] almost 3 years ago
#95 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] almost 3 years ago
#94 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] almost 3 years ago
#93 - Axes v0.4
Pull Request -
State: closed - Opened by will-moore almost 3 years ago
- 14 comments
#92 - Also define --output option at the subcommand parser for usability
Pull Request -
State: closed - Opened by sbesson almost 3 years ago
- 3 comments
#91 - Masks with Z or T null should apply across all Z or T indices
Issue -
State: open - Opened by will-moore almost 3 years ago
- 1 comment
Labels: bug
#90 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] almost 3 years ago
#89 - Improve reporting the "export image" error
Issue -
State: open - Opened by khaledk2 almost 3 years ago
- 1 comment
Labels: enhancement
#88 - Export dataset
Pull Request -
State: closed - Opened by will-moore almost 3 years ago
- 3 comments
#87 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] almost 3 years ago
#86 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] about 3 years ago
#85 - Add support for HCS export with the `--bf` flag
Issue -
State: open - Opened by sbesson about 3 years ago
Labels: enhancement
#84 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] about 3 years ago
#83 - Support exporting dataset
Pull Request -
State: closed - Opened by dominikl about 3 years ago
- 16 comments
#82 - Use nested chunk store for labels
Pull Request -
State: closed - Opened by will-moore about 3 years ago
- 26 comments
#81 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] about 3 years ago
#80 - Remove opencv dependency
Pull Request -
State: closed - Opened by sbesson about 3 years ago
- 6 comments
#79 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] about 3 years ago
#78 - Review export command-line options
Issue -
State: open - Opened by sbesson about 3 years ago
#77 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] about 3 years ago
#76 - bioformats2raw export: unify Zarr layout and add OMERO metadata
Pull Request -
State: closed - Opened by sbesson about 3 years ago
- 6 comments
#75 - Fix --bf option for bioformats2raw 0.3.0
Pull Request -
State: closed - Opened by sbesson about 3 years ago
- 5 comments
#74 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] about 3 years ago
#73 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] about 3 years ago
#72 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] about 3 years ago
#71 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] about 3 years ago
#70 - export v0.3 ome ngff
Pull Request -
State: closed - Opened by will-moore about 3 years ago
- 5 comments
#69 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] about 3 years ago
#68 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] over 3 years ago
#67 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] over 3 years ago
#66 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] over 3 years ago
#65 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] over 3 years ago
#64 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] over 3 years ago