Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / oist/optinist issues and pull requests

#552 - codespell: config, workflow + some typos fixed using codespell.

Pull Request - State: closed - Opened by yarikoptic over 1 year ago - 1 comment

#551 - add suite2p motion registration's result into NWB

Issue - State: open - Opened by ReiHashimoto over 1 year ago

#550 - required parameter with empty default value

Issue - State: open - Opened by ReiHashimoto over 1 year ago

#549 - APIドキュメントの整備

Issue - State: open - Opened by emuemuJP over 1 year ago

#548 - ボタンや文言の修正

Issue - State: closed - Opened by emuemuJP over 1 year ago - 1 comment

#547 - CaImAn Motion Correction Unsupported Arguments

Issue - State: open - Opened by DeanTM over 1 year ago - 1 comment
Labels: bug, frontend

#546 - GCaMap -> GCaMP

Issue - State: closed - Opened by DeanTM over 1 year ago - 1 comment

#545 - update react-flow-renderer to v10

Pull Request - State: closed - Opened by ReiHashimoto over 1 year ago

#543 - update python module versions

Pull Request - State: closed - Opened by ReiHashimoto over 1 year ago

#542 - update dependencies

Pull Request - State: closed - Opened by ReiHashimoto over 1 year ago

#541 - remove .env from repo

Pull Request - State: closed - Opened by ReiHashimoto over 1 year ago

#540 - サイズが大きいInputの際のOverflowError

Issue - State: closed - Opened by ReiHashimoto over 1 year ago - 3 comments
Labels: bug, backend

#539 - upgrade node 20

Pull Request - State: closed - Opened by sanglevinh over 1 year ago - 6 comments

#538 - Add workspace

Pull Request - State: closed - Opened by ReiHashimoto over 1 year ago

#537 - [No.22] パラメータの説明機能の実装

Issue - State: open - Opened by emuemuJP over 1 year ago - 3 comments
Labels: enhancement, backend, frontend

#536 - [No.42]NWBファイルに入力データを格納するオプションの実装

Issue - State: open - Opened by emuemuJP over 1 year ago
Labels: enhancement, backend, frontend

#535 - [No.15]ROIのマニュアルでの削除/追加機能の改善(ROI Edit モード機能の追加)

Issue - State: closed - Opened by emuemuJP over 1 year ago - 6 comments
Labels: enhancement, backend, frontend

#534 - [No.39]URLリンクからデータをアップロードする機能

Issue - State: closed - Opened by emuemuJP over 1 year ago - 1 comment
Labels: enhancement, backend, frontend

#533 - [No.8]マルチチャンネルで取得した画像データに対応

Issue - State: open - Opened by emuemuJP over 1 year ago
Labels: bug, backend

#532 - [No.40]Tiff ファイルアップロード時の形式チェックを実装

Issue - State: closed - Opened by emuemuJP over 1 year ago - 1 comment
Labels: enhancement, backend

#531 - ソフトウェアバージョンアップ対応（BackEnd）

Issue - State: closed - Opened by itutu-tienday over 1 year ago - 2 comments
Labels: enhancement

#530 - ソフトウェアバージョンアップ対応（FrontEnd）

Issue - State: closed - Opened by itutu-tienday over 1 year ago - 4 comments
Labels: enhancement, frontend

#529 - update directory structure

Pull Request - State: closed - Opened by ReiHashimoto over 1 year ago

#528 - BE: Sort input file by name (asc)

Pull Request - State: closed - Opened by quanpython over 1 year ago

#527 - Update unittest

Pull Request - State: closed - Opened by quanpython over 1 year ago - 5 comments

#526 - Fix issue 510

Pull Request - State: closed - Opened by sanglevinh over 1 year ago

#525 - Makefileメンテナンス

Issue - State: closed - Opened by itutu-tienday over 1 year ago
Labels: enhancement, backend

#524 - FrontEndビルドの性能改善

Issue - State: closed - Opened by itutu-tienday over 1 year ago - 5 comments
Labels: frontend

#523 - ソフトウェアバージョンアップ対応・対応ルール策定

Issue - State: closed - Opened by itutu-tienday over 1 year ago - 1 comment

#522 - 開発者・コントリビューター向けドキュメントメンテナンス

Issue - State: closed - Opened by itutu-tienday over 1 year ago - 1 comment
Labels: documentation

#521 - [No.11]Tutorial 動画の作成

Issue - State: closed - Opened by emuemuJP over 1 year ago - 1 comment
Labels: enhancement

#520 - [No.26]WORKFLOW のプルダウンメニューの順序の整理

Issue - State: closed - Opened by emuemuJP over 1 year ago - 2 comments
Labels: enhancement, backend, frontend

#519 - [No.27]分岐のあるパイプラインでの保存に対応

Issue - State: closed - Opened by emuemuJP over 1 year ago - 6 comments
Labels: enhancement, backend

#518 - [No.5]ROI抽出アルゴリズムCaImAnのCNMFE関数の実装

Issue - State: closed - Opened by emuemuJP over 1 year ago - 3 comments
Labels: enhancement, backend, frontend

#517 - [No.47]Plot での表示cellID を内部処理のcellIDと合わせる

Issue - State: closed - Opened by emuemuJP over 1 year ago - 3 comments
Labels: enhancement, backend, frontend

#516 - [No.10]プロット時の表示を変更

Issue - State: closed - Opened by emuemuJP over 1 year ago - 1 comment
Labels: enhancement, frontend

#515 - [No.46]フレームレートを指定して、内部処理に使えるようにする

Issue - State: closed - Opened by emuemuJP over 1 year ago - 6 comments
Labels: enhancement, backend, frontend

#514 - [No.41]分割tiff fileの並び順

Issue - State: closed - Opened by emuemuJP over 1 year ago - 9 comments
Labels: enhancement, backend, frontend

#513 - [No.8]Inscopixフォーマットのデータ入力に対応

Issue - State: closed - Opened by emuemuJP over 1 year ago - 3 comments
Labels: enhancement, backend, frontend

#512 - [No.16]granger doesn't work

Issue - State: closed - Opened by emuemuJP over 1 year ago - 1 comment
Labels: bug, backend

#511 - ワークフロー処理の中断APIの実装

Issue - State: closed - Opened by itutu-tienday over 1 year ago - 2 comments
Labels: enhancement

#510 - 特定のパラメータを変更するとエラーになる

Issue - State: closed - Opened by emuemuJP over 1 year ago - 2 comments
Labels: bug, backend, frontend

#509 - parameterが手入力値を受け入れない

Issue - State: closed - Opened by emuemuJP over 1 year ago - 1 comment
Labels: bug, frontend

#507 - ユニットテスト更新（BE）

Issue - State: closed - Opened by itutu-tienday over 1 year ago - 1 comment
Labels: enhancement, testing

#506 - [No.23]VisualizeでFluorescenceのtime(x軸)のrangeを固定

Issue - State: closed - Opened by ReiHashimoto over 1 year ago - 3 comments
Labels: enhancement, frontend

#505 - 関数parameterの説明を表示

Issue - State: open - Opened by ReiHashimoto over 1 year ago - 1 comment
Labels: enhancement, backend, frontend

#504 - pyproject.tomlおよびpre-commitの導入

Pull Request - State: closed - Opened by ReiHashimoto over 1 year ago - 6 comments

#503 - update version 0.4.0

Pull Request - State: closed - Opened by ReiHashimoto over 1 year ago

#502 - update version

Pull Request - State: closed - Opened by ReiHashimoto over 1 year ago

#501 - [#493] Edit roiによるNWBファイルの変更内容を明記

Pull Request - State: closed - Opened by ReiHashimoto over 1 year ago

#500 - revert update version

Pull Request - State: closed - Opened by ReiHashimoto over 1 year ago

#499 - update version

Pull Request - State: closed - Opened by ReiHashimoto over 1 year ago

#497 - Save whole nwb roi edit

Pull Request - State: closed - Opened by ReiHashimoto over 1 year ago

#496 - nwb, snakemake paramsがimportに含まれていない

Issue - State: open - Opened by ReiHashimoto over 1 year ago
Labels: bug, backend

#495 - snakemakeに関する情報の記録

Issue - State: open - Opened by ReiHashimoto almost 2 years ago
Labels: enhancement, backend

#494 - 最終実行セッションの復元

Pull Request - State: closed - Opened by ReiHashimoto almost 2 years ago - 6 comments

#493 - Edit roiによるNWBファイルの変更内容を明記

Issue - State: closed - Opened by emuemuJP almost 2 years ago

#492 - Record画面での処理エラーの詳細表示

Issue - State: closed - Opened by itutu-tienday almost 2 years ago - 2 comments
Labels: backend

#491 - [#490] Recordテーブル更新のトリガー調整

Pull Request - State: closed - Opened by ReiHashimoto almost 2 years ago - 1 comment

#490 - RUN_ALL終了後にNWBファイルのダウンロード可否状態が更新されない

Issue - State: closed - Opened by ReiHashimoto almost 2 years ago
Labels: bug, frontend

#489 - suite2P_roiにはエラー

Issue - State: open - Opened by milesOIST almost 2 years ago - 1 comment
Labels: enhancement

#488 - カラーブロック 提案

Issue - State: open - Opened by milesOIST almost 2 years ago
Labels: enhancement

#487 - add readthedoc config

Pull Request - State: closed - Opened by ReiHashimoto almost 2 years ago

#486 - Fix bugs after pypi test

Pull Request - State: closed - Opened by ReiHashimoto almost 2 years ago

#485 - Fix test error

Pull Request - State: closed - Opened by ReiHashimoto almost 2 years ago

#484 - Resolve conflicts main

Pull Request - State: closed - Opened by ReiHashimoto almost 2 years ago

#483 - Update version

Pull Request - State: closed - Opened by ReiHashimoto almost 2 years ago

#482 - import develop-main

Pull Request - State: closed - Opened by ReiHashimoto almost 2 years ago

#481 - Run pytest in develop environment

Pull Request - State: closed - Opened by quanpython almost 2 years ago - 2 comments

#480 - Revert "Add linter and formater"

Pull Request - State: closed - Opened by emuemuJP almost 2 years ago

#479 - loggingのファイル操作で、例外操作を改善

Pull Request - State: closed - Opened by itutu-tienday almost 2 years ago - 1 comment

#478 - 最終実行ワークフローの保持

Pull Request - State: closed - Opened by ReiHashimoto almost 2 years ago - 5 comments

#477 - Add linter and formater

Pull Request - State: closed - Opened by ReiHashimoto almost 2 years ago - 2 comments

#476 - [#460] 相対パスの修正

Pull Request - State: closed - Opened by ReiHashimoto almost 2 years ago - 1 comment

#475 - Update optinist install documents.

Pull Request - State: closed - Opened by itutu-tienday almost 2 years ago

#474 - [#429] outputディレクトリのユニーク化

Pull Request - State: closed - Opened by ReiHashimoto almost 2 years ago

#473 - Remove config TwoPhotonSeries name. Save edit roi status in nwb file.

Pull Request - State: closed - Opened by emuemuJP almost 2 years ago

#472 - Workflow実行中にVisualize, Reproduceを無効にする

Issue - State: open - Opened by ReiHashimoto almost 2 years ago - 1 comment
Labels: enhancement, frontend

#471 - [#434] 実行中のWORKFLOWID表示

Pull Request - State: closed - Opened by ReiHashimoto almost 2 years ago - 5 comments

#470 - Fixed Mouse over

Pull Request - State: closed - Opened by sanglevinh almost 2 years ago - 3 comments

#469 - Fix type any, Fix file path DialogContext

Pull Request - State: closed - Opened by sanglevinh almost 2 years ago

#466 - nwbに保存されるoptinistモジュールのバージョン

Issue - State: open - Opened by emuemuJP almost 2 years ago
Labels: bug, backend

#465 - Update be modules version

Pull Request - State: closed - Opened by itutu-tienday almost 2 years ago

#464 - Move block while display

Pull Request - State: closed - Opened by itutu-tienday almost 2 years ago - 1 comment

#463 - snakemakeでのcreate conda envの進捗ログの確認方法調査

Issue - State: closed - Opened by itutu-tienday almost 2 years ago - 2 comments
Labels: question

#462 - Update caiman_env.yaml to install without conda-forge

Pull Request - State: closed - Opened by quanpython almost 2 years ago - 3 comments

#461 - Improve be run proc

Pull Request - State: closed - Opened by itutu-tienday almost 2 years ago - 3 comments

#460 - 相対パスの修正

Issue - State: closed - Opened by emuemuJP almost 2 years ago - 4 comments
Labels: bug, backend

#459 - BackEndのホットリロード設定の改善

Issue - State: closed - Opened by itutu-tienday almost 2 years ago - 2 comments
Labels: bug, backend

#458 - #457 improved be log format

Pull Request - State: closed - Opened by itutu-tienday almost 2 years ago

#457 - [BackEnd]ログ出力フォーマット改善

Issue - State: closed - Opened by itutu-tienday almost 2 years ago - 1 comment
Labels: enhancement, backend

#456 - ROI editの機能追加後、マウスのオーバーレイをした際にROI IDが表示されない

Issue - State: closed - Opened by emuemuJP almost 2 years ago - 2 comments
Labels: bug, frontend

#455 - Update optinist_env.yaml

Pull Request - State: closed - Opened by emuemuJP almost 2 years ago

#454 - Optinist_env.yamlの環境構築時にエラー

Issue - State: closed - Opened by emuemuJP almost 2 years ago - 1 comment

#453 - Edit ROI with Caiman and LCCD

Pull Request - State: closed - Opened by quanpython almost 2 years ago - 6 comments

#452 - LCCD Edit ROI

Pull Request - State: closed - Opened by quanpython almost 2 years ago

#451 - Update installation docs

Pull Request - State: closed - Opened by itutu-tienday almost 2 years ago