Ecosyste.ms: Issues

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GitHub / ohdsi/cohortdiagnostics issues and pull requests

#54 - Interpreting the incidence rate output

Issue - State: closed - Opened by Ak784 over 4 years ago - 8 comments

#54 - Interpreting the incidence rate output

Issue - State: closed - Opened by Ak784 over 4 years ago - 8 comments

#52 - Deduplicate cohorts in Shiny app

Issue - State: closed - Opened by schuemie over 4 years ago - 1 comment
Labels: bug

#52 - Deduplicate cohorts in Shiny app

Issue - State: closed - Opened by schuemie over 4 years ago - 1 comment
Labels: bug

#51 - Missing thousands-commas in cohort counts in Shiny app

Issue - State: closed - Opened by schuemie over 4 years ago
Labels: bug

#51 - Missing thousands-commas in cohort counts in Shiny app

Issue - State: closed - Opened by schuemie over 4 years ago
Labels: bug

#50 - Sort cohorts alphabetically by cohort name in Shiny app

Issue - State: closed - Opened by schuemie over 4 years ago
Labels: enhancement

#50 - Sort cohorts alphabetically by cohort name in Shiny app

Issue - State: closed - Opened by schuemie over 4 years ago
Labels: enhancement

#49 - Dropped ff in favor of Andromeda

Pull Request - State: closed - Opened by gowthamrao over 4 years ago

#49 - Dropped ff in favor of Andromeda

Pull Request - State: closed - Opened by gowthamrao over 4 years ago

#48 - Drop ff in favor of Andromeda

Issue - State: closed - Opened by schuemie over 4 years ago - 1 comment
Labels: enhancement

#48 - Drop ff in favor of Andromeda

Issue - State: closed - Opened by schuemie over 4 years ago - 1 comment
Labels: enhancement

#46 - Adds ability to pass covariateSettings object to modify default table 1 specs

Pull Request - State: closed - Opened by gowthamrao over 4 years ago
Labels: enhancement

#46 - Adds ability to pass covariateSettings object to modify default table 1 specs

Pull Request - State: closed - Opened by gowthamrao over 4 years ago
Labels: enhancement

#44 - Add field for cohort person count, record count and person time to characterization output

Issue - State: closed - Opened by gowthamrao almost 5 years ago - 1 comment
Labels: enhancement

#44 - Add field for cohort person count, record count and person time to characterization output

Issue - State: closed - Opened by gowthamrao almost 5 years ago - 1 comment
Labels: enhancement

#43 - Unable to deploy R-shiny app in develop branch (can in master)

Issue - State: closed - Opened by gowthamrao almost 5 years ago - 1 comment

#43 - Unable to deploy R-shiny app in develop branch (can in master)

Issue - State: closed - Opened by gowthamrao almost 5 years ago - 1 comment

#42 - characterization table - drugs truncate at the letter P

Issue - State: closed - Opened by jhardin29 almost 5 years ago - 3 comments

#42 - characterization table - drugs truncate at the letter P

Issue - State: closed - Opened by jhardin29 almost 5 years ago - 3 comments

#41 - Add a vignette documenting how to use CohortDiagnostics in a study package

Issue - State: closed - Opened by schuemie almost 5 years ago - 1 comment
Labels: Version 2.1.0

#41 - Add a vignette documenting how to use CohortDiagnostics in a study package

Issue - State: closed - Opened by schuemie almost 5 years ago - 1 comment
Labels: Version 2.1.0

#40 - change default behavior of readr::read_csv

Pull Request - State: closed - Opened by gowthamrao almost 5 years ago - 2 comments

#40 - change default behavior of readr::read_csv

Pull Request - State: closed - Opened by gowthamrao almost 5 years ago - 2 comments

#39 - readr::read_csv by default trims white space

Issue - State: closed - Opened by gowthamrao almost 5 years ago - 6 comments

#39 - readr::read_csv by default trims white space

Issue - State: closed - Opened by gowthamrao almost 5 years ago - 6 comments

#38 - Remove code duplication in preparing data for Shiny app

Issue - State: closed - Opened by schuemie almost 5 years ago - 2 comments

#38 - Remove code duplication in preparing data for Shiny app

Issue - State: closed - Opened by schuemie almost 5 years ago - 2 comments

#37 - Shiny app - show cohort name and database name as title on shiny page

Issue - State: closed - Opened by gowthamrao almost 5 years ago - 1 comment

#36 - Differences in cohort.csv can create duplicate entries in shiny results viewer

Issue - State: closed - Opened by anthonysena almost 5 years ago - 2 comments
Labels: question

#36 - Differences in cohort.csv can create duplicate entries in shiny results viewer

Issue - State: closed - Opened by anthonysena almost 5 years ago - 2 comments
Labels: question

#35 - error when generateInclusionStats = FALSE but SQL has inclusionStats

Issue - State: closed - Opened by gowthamrao almost 5 years ago - 3 comments
Labels: bug

#35 - error when generateInclusionStats = FALSE but SQL has inclusionStats

Issue - State: closed - Opened by gowthamrao almost 5 years ago - 3 comments
Labels: bug

#34 - Typos

Issue - State: closed - Opened by ericaVoss almost 5 years ago - 1 comment

#34 - Typos

Issue - State: closed - Opened by ericaVoss almost 5 years ago - 1 comment

#32 - Ability to pass FeatureExtraction::createCovariateSettings to getCohortCharacteristics

Issue - State: closed - Opened by edward-burn almost 5 years ago - 4 comments
Labels: enhancement

#31 - Pass oracleTempSchema reference - fixes #30

Pull Request - State: closed - Opened by anthonysena almost 5 years ago - 1 comment

#31 - Pass oracleTempSchema reference - fixes #30

Pull Request - State: closed - Opened by anthonysena almost 5 years ago - 1 comment

#29 - Replaces left join with not in

Pull Request - State: closed - Opened by wivern almost 5 years ago - 1 comment

#29 - Replaces left join with not in

Pull Request - State: closed - Opened by wivern almost 5 years ago - 1 comment

#28 - Fixed issue with deprecated function tibble::as.tibble()

Pull Request - State: closed - Opened by gowthamrao almost 5 years ago - 1 comment

#28 - Fixed issue with deprecated function tibble::as.tibble()

Pull Request - State: closed - Opened by gowthamrao almost 5 years ago - 1 comment

#27 - Use of deprecated function

Issue - State: closed - Opened by gowthamrao almost 5 years ago - 1 comment
Labels: bug

#27 - Use of deprecated function

Issue - State: closed - Opened by gowthamrao almost 5 years ago - 1 comment
Labels: bug

#26 - add Concept ID column to raw view of cohort characterization tables

Issue - State: closed - Opened by jamieweaver almost 5 years ago
Labels: enhancement

#26 - add Concept ID column to raw view of cohort characterization tables

Issue - State: closed - Opened by jamieweaver almost 5 years ago
Labels: enhancement

#25 - Resuming between "getCohortCounts" and "runCohortCharacterization" gives an error

Issue - State: closed - Opened by hms1 almost 5 years ago - 1 comment

#25 - Resuming between "getCohortCounts" and "runCohortCharacterization" gives an error

Issue - State: closed - Opened by hms1 almost 5 years ago - 1 comment

#24 - Cohorts with 0 persons causes error in merge

Issue - State: closed - Opened by gowthamrao almost 5 years ago - 2 comments

#24 - Cohorts with 0 persons causes error in merge

Issue - State: closed - Opened by gowthamrao almost 5 years ago - 2 comments

#23 - Issue when cohorts use measurement (potential bug)

Issue - State: closed - Opened by azzashoaibi almost 5 years ago - 1 comment

#23 - Issue when cohorts use measurement (potential bug)

Issue - State: closed - Opened by azzashoaibi almost 5 years ago - 1 comment

#22 - Make sure empty cohorts are handled correctly

Issue - State: closed - Opened by schuemie almost 5 years ago - 2 comments

#22 - Make sure empty cohorts are handled correctly

Issue - State: closed - Opened by schuemie almost 5 years ago - 2 comments

#21 - ERROR: relation "cdm_ibm_ccae_v1103.concept_relationship"

Issue - State: closed - Opened by edward-burn almost 5 years ago - 2 comments

#21 - ERROR: relation "cdm_ibm_ccae_v1103.concept_relationship"

Issue - State: closed - Opened by edward-burn almost 5 years ago - 2 comments

#20 - Add concept_id column to orphan and included concepts tables

Issue - State: closed - Opened by schuemie almost 5 years ago - 1 comment
Labels: enhancement

#20 - Add concept_id column to orphan and included concepts tables

Issue - State: closed - Opened by schuemie almost 5 years ago - 1 comment
Labels: enhancement

#19 - invalid 'nchars' argument error

Issue - State: closed - Opened by edward-burn almost 5 years ago - 3 comments

#19 - invalid 'nchars' argument error

Issue - State: closed - Opened by edward-burn almost 5 years ago - 3 comments

#18 - Use COUNT_BIG for concept counts

Pull Request - State: closed - Opened by anthonysena almost 5 years ago

#18 - Use COUNT_BIG for concept counts

Pull Request - State: closed - Opened by anthonysena almost 5 years ago

#17 - Make sure source concept sets are handled properly

Issue - State: closed - Opened by schuemie almost 5 years ago - 2 comments

#16 - Allow for concept_count to be input parameter, rather than calculated off database

Issue - State: closed - Opened by pbr6cornell almost 5 years ago - 1 comment
Labels: enhancement

#15 - Invalid object name 'scratch.dbo.concept_counts'.

Issue - State: closed - Opened by ericaVoss almost 5 years ago - 4 comments

#14 - formal construct for set of cohorts (study.json) object

Issue - State: closed - Opened by vojtechhuser almost 5 years ago - 2 comments

#13 - formalize extraction of concept sets from JSON into a separate package

Issue - State: closed - Opened by vojtechhuser almost 5 years ago - 1 comment

#12 - fixing a less than in a left join

Pull Request - State: closed - Opened by jdposada almost 5 years ago - 2 comments

#11 - Less than operator in LEFT JOIN

Issue - State: closed - Opened by jdposada almost 5 years ago - 7 comments

#10 - databaseId is not a parameter in function, not in input data

Issue - State: closed - Opened by gowthamrao almost 5 years ago - 4 comments

#9 - Add ability to save plots and figures

Issue - State: closed - Opened by schuemie almost 5 years ago - 2 comments
Labels: enhancement

#8 - Add vignette explaining how to create a package with cohort diagnostics

Issue - State: closed - Opened by schuemie almost 5 years ago - 3 comments
Labels: Version 2.1.0

#7 - Add cohort characteristics comparison plot

Issue - State: closed - Opened by schuemie almost 5 years ago
Labels: enhancement

#6 - Index event breakdown: add ability to show multiple DBs

Issue - State: closed - Opened by schuemie almost 5 years ago
Labels: enhancement

#5 - Add plot showing relative cohort counts across databases

Issue - State: closed - Opened by schuemie almost 5 years ago
Labels: enhancement

#4 - Fixes table drop - thanks @hms1

Pull Request - State: closed - Opened by anthonysena about 5 years ago

#3 - removed inaccurate comment

Pull Request - State: closed - Opened by jamieweaver about 5 years ago

#2 - fixed typo

Pull Request - State: closed - Opened by jamieweaver about 5 years ago

#1 - adding phenotype stability functions

Pull Request - State: closed - Opened by jamieweaver about 5 years ago