Ecosyste.ms: Issues

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GitHub / nvictus/pybbi issues and pull requests

#54 - Bump pypa/gh-action-pypi-publish from 1.10.3 to 1.12.2

Pull Request - State: open - Opened by dependabot[bot] 19 days ago
Labels: dependencies

#53 - Bump pypa/gh-action-pypi-publish from 1.10.3 to 1.11.0

Pull Request - State: closed - Opened by dependabot[bot] 26 days ago - 1 comment
Labels: dependencies

#52 - Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.10.3

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#51 - Bump pypa/cibuildwheel from 2.20.0 to 2.21.3

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#50 - Bump pypa/cibuildwheel from 2.18.1 to 2.20.0

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#49 - Bump pypa/cibuildwheel from 2.18.1 to 2.19.2

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies

#48 - Bump pypa/cibuildwheel from 2.18.1 to 2.19.1

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 1 comment
Labels: dependencies

#47 - Bump actions/checkout from 3 to 4

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago
Labels: dependencies

#46 - Bump actions/download-artifact from 3 to 4

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 1 comment
Labels: dependencies

#45 - Bump pypa/cibuildwheel from 2.12.0 to 2.18.1

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago
Labels: dependencies

#44 - Bump pypa/cibuildwheel from 2.12.0 to 2.18.0

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago - 1 comment
Labels: dependencies

#43 - Bump actions/setup-python from 2 to 5

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies

#42 - Bump docker/setup-qemu-action from 1 to 3

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies

#41 - Bump actions/upload-artifact from 3 to 4

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago - 1 comment
Labels: dependencies

#40 - Bump pypa/gh-action-pypi-publish from 1.5.0 to 1.8.14

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies

#39 - Bump pypa/cibuildwheel from 2.12.0 to 2.17.0

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago - 1 comment
Labels: dependencies

#38 - Bump actions/upload-artifact from 3 to 4

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies

#37 - Bump docker/setup-qemu-action from 1 to 3

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies

#36 - Bump actions/download-artifact from 3 to 4

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies

#35 - Bump actions/setup-python from 2 to 5

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies

#34 - Bump actions/checkout from 3 to 4

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies

#33 - feat: Exact summary calculation and zoom table queries

Pull Request - State: closed - Opened by nvictus 10 months ago

#32 - Clarify stackup behavior in Readme

Pull Request - State: closed - Opened by nvictus about 1 year ago

#31 - pip install fails on Windows

Issue - State: closed - Opened by bskubi about 1 year ago - 1 comment

#28 - Clarify stackup docstring and swap ordereddict for dict

Pull Request - State: closed - Opened by nvictus over 1 year ago

#26 - Query regarding the behavior of bbi.fetch in situations where window_size < bin_size

Issue - State: closed - Opened by smitkadvani over 1 year ago - 1 comment
Labels: question

#25 - pybii+dataframes

Issue - State: closed - Opened by gfudenberg over 1 year ago - 3 comments
Labels: question

#24 - Re-incorporate ucsc lib into package build

Pull Request - State: closed - Opened by nvictus over 1 year ago

#23 - chromsizes as a regular dict?

Issue - State: closed - Opened by Phlya almost 2 years ago - 4 comments

#22 - bbi.stackup doesn't error with intervals of different lengths

Issue - State: closed - Opened by Snehal1894 about 2 years ago - 3 comments

#20 - Switch to cibuildwheel

Pull Request - State: closed - Opened by nvictus almost 3 years ago

#19 - Getting error "cannot find -lkent" when building docker image on macOS M1

Issue - State: closed - Opened by TkhiienLok almost 3 years ago - 4 comments

#18 - Use machine type for include path

Pull Request - State: closed - Opened by pkerpedjiev almost 3 years ago

#17 - Docker build on Apple M1 Pro fails

Issue - State: closed - Opened by pkerpedjiev almost 3 years ago - 5 comments

#16 - Update README.md

Pull Request - State: closed - Opened by pkerpedjiev over 3 years ago - 1 comment

#15 - BigBed scores: fetch vs fetch_intervals

Issue - State: closed - Opened by LeoWelter over 3 years ago - 1 comment
Labels: question

#14 - needLargeMem error when using fetch with bins

Issue - State: closed - Opened by maxwellsh about 4 years ago - 2 comments

#13 - Class-based implementation with autosql-to-pandas support

Pull Request - State: closed - Opened by nvictus over 4 years ago - 2 comments

#12 - bbi.fetch with summary="sum"

Pull Request - State: closed - Opened by keller-mark over 4 years ago - 1 comment

#11 - Close bbi file on python errors. Fixes #10.

Pull Request - State: closed - Opened by nvictus almost 5 years ago

#10 - Resource cleanup on errors

Issue - State: closed - Opened by nvictus almost 5 years ago

#9 - Build wheels using github action workflows

Pull Request - State: closed - Opened by nvictus almost 5 years ago

#8 - CI workflow to build wheels

Pull Request - State: closed - Opened by nvictus about 5 years ago

#7 - Add script to upgrade and patch vendorized UCSC source

Pull Request - State: closed - Opened by nvictus about 5 years ago

#6 - Not importing bbi

Issue - State: closed - Opened by gibcus over 5 years ago - 10 comments

#4 - Pass no-as-needed argument to linker

Issue - State: closed - Opened by nvictus about 6 years ago

#3 - Unable to import compress

Issue - State: closed - Opened by mildewey about 6 years ago - 12 comments

#2 - Errors installing on OS X

Issue - State: closed - Opened by pkerpedjiev over 7 years ago - 11 comments

#1 - segfault with fetch_intervals

Issue - State: closed - Opened by nvictus almost 8 years ago - 1 comment