Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / nostrumbiodiscovery/pele_platform issues and pull requests

#174 - PELE-505 Bugfixes in 1.6b7

Pull Request - State: closed - Opened by frumpowy over 3 years ago

#174 - PELE-505 Bugfixes in 1.6b7

Pull Request - State: closed - Opened by frumpowy over 3 years ago

#173 - Preventing PPP from running twice

Pull Request - State: closed - Opened by frumpowy over 3 years ago

#173 - Preventing PPP from running twice

Pull Request - State: closed - Opened by frumpowy over 3 years ago

#172 - PELE-500 Checker for PELE version and clean-up

Pull Request - State: closed - Opened by frumpowy over 3 years ago - 2 comments

#172 - PELE-500 Checker for PELE version and clean-up

Pull Request - State: closed - Opened by frumpowy over 3 years ago - 2 comments

#171 - PELE-451 Support for conformation perturbtation

Pull Request - State: closed - Opened by frumpowy over 3 years ago - 3 comments

#171 - PELE-451 Support for conformation perturbtation

Pull Request - State: closed - Opened by frumpowy over 3 years ago - 3 comments

#170 - PELEPlatform 1.6.0 beta 7

Pull Request - State: closed - Opened by martimunicoy over 3 years ago - 9 comments

#170 - PELEPlatform 1.6.0 beta 7

Pull Request - State: closed - Opened by martimunicoy over 3 years ago - 9 comments

#169 - Pele 497 - New flag for pele minimum steps

Pull Request - State: closed - Opened by rgago-bio over 3 years ago - 1 comment

#169 - Pele 497 - New flag for pele minimum steps

Pull Request - State: closed - Opened by rgago-bio over 3 years ago - 1 comment

#168 - Changed rotationScalingFactor in induced fit

Pull Request - State: closed - Opened by frumpowy over 3 years ago

#168 - Changed rotationScalingFactor in induced fit

Pull Request - State: closed - Opened by frumpowy over 3 years ago

#167 - Add support for ConformationPerturbation

Pull Request - State: closed - Opened by cescgina over 3 years ago - 1 comment

#167 - Add support for ConformationPerturbation

Pull Request - State: closed - Opened by cescgina over 3 years ago - 1 comment

#166 - Error claiming missing external template but actually missing OpenFF folder

Issue - State: closed - Opened by cescgina over 3 years ago - 1 comment

#165 - PELE-496 SatMut postprocessing bugfix when running equilibration

Pull Request - State: closed - Opened by frumpowy over 3 years ago

#165 - PELE-496 SatMut postprocessing bugfix when running equilibration

Pull Request - State: closed - Opened by frumpowy over 3 years ago

#164 - PELE-495 Bugfix: site_finder randomization and additional test

Pull Request - State: closed - Opened by frumpowy over 3 years ago

#164 - PELE-495 Bugfix: site_finder randomization and additional test

Pull Request - State: closed - Opened by frumpowy over 3 years ago

#163 - PELE-419 Covalent docking

Pull Request - State: closed - Opened by frumpowy over 3 years ago - 5 comments

#163 - PELE-419 Covalent docking

Pull Request - State: closed - Opened by frumpowy over 3 years ago - 5 comments

#162 - PELE-493 Analysis filtering

Pull Request - State: closed - Opened by frumpowy over 3 years ago

#162 - PELE-493 Analysis filtering

Pull Request - State: closed - Opened by frumpowy over 3 years ago

#161 - PELE-492

Pull Request - State: closed - Opened by frumpowy over 3 years ago

#160 - PELE-491

Pull Request - State: closed - Opened by frumpowy over 3 years ago - 1 comment

#160 - PELE-491

Pull Request - State: closed - Opened by frumpowy over 3 years ago - 1 comment

#159 - Fix check_residue_exists

Pull Request - State: closed - Opened by martimunicoy over 3 years ago

#159 - Fix check_residue_exists

Pull Request - State: closed - Opened by martimunicoy over 3 years ago

#158 - Release of 1.6.0b6

Pull Request - State: closed - Opened by martimunicoy over 3 years ago - 1 comment

#158 - Release of 1.6.0b6

Pull Request - State: closed - Opened by martimunicoy over 3 years ago - 1 comment

#157 - Pele 490 - New environment variables PELE_EXEC, PELE_DATA and PELE_DOCUMENTS

Pull Request - State: closed - Opened by rgago-bio over 3 years ago - 2 comments

#157 - Pele 490 - New environment variables PELE_EXEC, PELE_DATA and PELE_DOCUMENTS

Pull Request - State: closed - Opened by rgago-bio over 3 years ago - 2 comments

#156 - PELE-489 Minor fixes

Pull Request - State: closed - Opened by frumpowy over 3 years ago - 4 comments

#156 - PELE-489 Minor fixes

Pull Request - State: closed - Opened by frumpowy over 3 years ago - 4 comments

#155 - Fix singularity test (adapted to SRUN environment variable)

Pull Request - State: closed - Opened by rgago-bio over 3 years ago

#155 - Fix singularity test (adapted to SRUN environment variable)

Pull Request - State: closed - Opened by rgago-bio over 3 years ago

#154 - Release of 1.6.0b5

Pull Request - State: closed - Opened by martimunicoy over 3 years ago - 10 comments

#154 - Release of 1.6.0b5

Pull Request - State: closed - Opened by martimunicoy over 3 years ago - 10 comments

#153 - Aqua pele

Pull Request - State: closed - Opened by hemahecodes over 3 years ago - 6 comments

#153 - Aqua pele

Pull Request - State: closed - Opened by hemahecodes over 3 years ago - 6 comments

#152 - PELE-484 Reimplemented restart flag

Pull Request - State: closed - Opened by frumpowy over 3 years ago - 1 comment

#152 - PELE-484 Reimplemented restart flag

Pull Request - State: closed - Opened by frumpowy over 3 years ago - 1 comment

#150 - Add equilibration_mode parameter for Adaptive

Pull Request - State: closed - Opened by cescgina over 3 years ago

#150 - Add equilibration_mode parameter for Adaptive

Pull Request - State: closed - Opened by cescgina over 3 years ago

#149 - PELE-483 OutIn package clean-up and extra box test

Pull Request - State: closed - Opened by frumpowy over 3 years ago

#149 - PELE-483 OutIn package clean-up and extra box test

Pull Request - State: closed - Opened by frumpowy over 3 years ago

#148 - PELE-482 Raise error when multiple simulation types in YAML

Pull Request - State: closed - Opened by frumpowy over 3 years ago

#148 - PELE-482 Raise error when multiple simulation types in YAML

Pull Request - State: closed - Opened by frumpowy over 3 years ago

#147 - Release of 1.6.0b4

Pull Request - State: closed - Opened by martimunicoy over 3 years ago

#147 - Release of 1.6.0b4

Pull Request - State: closed - Opened by martimunicoy over 3 years ago

#146 - PELE-481 SatMut output file sorting bugfix

Pull Request - State: closed - Opened by frumpowy over 3 years ago

#146 - PELE-481 SatMut output file sorting bugfix

Pull Request - State: closed - Opened by frumpowy over 3 years ago

#145 - PELE-471 Add enviroment variables for singularity

Pull Request - State: closed - Opened by rgago-bio over 3 years ago

#145 - PELE-471 Add enviroment variables for singularity

Pull Request - State: closed - Opened by rgago-bio over 3 years ago

#144 - PELE-480 Prevent overwriting *.conf when running only_analysis

Pull Request - State: closed - Opened by frumpowy over 3 years ago

#144 - PELE-480 Prevent overwriting *.conf when running only_analysis

Pull Request - State: closed - Opened by frumpowy over 3 years ago

#143 - PELE-404 Switch from PlopRotTemp to peleffy

Pull Request - State: closed - Opened by frumpowy over 3 years ago - 12 comments

#143 - PELE-404 Switch from PlopRotTemp to peleffy

Pull Request - State: closed - Opened by frumpowy over 3 years ago - 12 comments

#142 - Pele 471 - Flag singularity_exec added

Pull Request - State: closed - Opened by rgago-bio over 3 years ago

#142 - Pele 471 - Flag singularity_exec added

Pull Request - State: closed - Opened by rgago-bio over 3 years ago

#141 - PELE-477 Updates to site_finder clustering, pele.conf and adaptive.conf

Pull Request - State: closed - Opened by frumpowy over 3 years ago - 3 comments

#141 - PELE-477 Updates to site_finder clustering, pele.conf and adaptive.conf

Pull Request - State: closed - Opened by frumpowy over 3 years ago - 3 comments

#140 - PELE-470

Pull Request - State: closed - Opened by frumpowy over 3 years ago - 1 comment

#139 - Hot fixes prior beta 3 release

Pull Request - State: closed - Opened by martimunicoy over 3 years ago

#139 - Hot fixes prior beta 3 release

Pull Request - State: closed - Opened by martimunicoy over 3 years ago

#133 - PELE-472 Interaction restriction updates

Pull Request - State: closed - Opened by frumpowy over 3 years ago

#133 - PELE-472 Interaction restriction updates

Pull Request - State: closed - Opened by frumpowy over 3 years ago

#131 - PELE-466; Frag Refactoring

Pull Request - State: closed - Opened by hemahecodes over 3 years ago - 34 comments

#131 - PELE-466; Frag Refactoring

Pull Request - State: closed - Opened by hemahecodes over 3 years ago - 34 comments

#111 - Check pdb preprocessing with residues identified as HETATM

Issue - State: closed - Opened by rgago-bio over 3 years ago
Labels: bug

#111 - Check pdb preprocessing with residues identified as HETATM

Issue - State: closed - Opened by rgago-bio over 3 years ago
Labels: bug