Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / noaa-fims/fims issues and pull requests
#670 - Add fimsfit
Pull Request -
State: open - Opened by Bai-Li-NOAA about 22 hours ago
- 1 comment
#669 - feat(ParameterVector): Allows for time-varying parameters
Pull Request -
State: open - Opened by kellijohnson-NOAA 5 days ago
- 4 comments
#668 - Removes log_sigma_recruit from BH interface
Pull Request -
State: closed - Opened by kellijohnson-NOAA 14 days ago
- 2 comments
#667 - [Developer Issue]: No link to conventional commits in Reviewer checklist
Issue -
State: open - Opened by kellijohnson-NOAA 14 days ago
#666 - [feature:] do we need a get_parameter_names function?
Issue -
State: open - Opened by Andrea-Havron-NOAA about 1 month ago
Labels: kind: feature, status: triage_needed
#665 - 645 add variable map
Pull Request -
State: closed - Opened by Andrea-Havron-NOAA about 1 month ago
- 5 comments
#664 - [Developer Issue]: convert JSON output to R list following plan in design doc
Issue -
State: open - Opened by iantaylor-NOAA about 1 month ago
- 2 comments
Labels: status: triage_needed
#663 - Update DESCRIPTION to depend on R 4.1.0
Pull Request -
State: open - Opened by iantaylor-NOAA about 1 month ago
- 2 comments
#663 - Update DESCRIPTION to depend on R 4.1.0
Pull Request -
State: open - Opened by iantaylor-NOAA about 1 month ago
- 2 comments
#662 - [Developer Issue]: M2 Quality control task list
Issue -
State: open - Opened by kellijohnson-NOAA about 2 months ago
- 1 comment
Labels: kind: refactor, P3, theme: code cleanup
#661 - Style code and document
Pull Request -
State: closed - Opened by ChristineStawitz-NOAA 2 months ago
- 2 comments
#660 - [Developer Issue]: Use GHA to create a pull request to modify pull requests
Issue -
State: open - Opened by Bai-Li-NOAA 2 months ago
- 2 comments
Labels: status: triage_needed
#659 - [Developer Issue]: Add Doxygen formulas for functions in the population module
Issue -
State: open - Opened by Bai-Li-NOAA 2 months ago
Labels: status: triage_needed
#659 - [Developer Issue]: Add Doxygen formulas for functions in the population module
Issue -
State: open - Opened by Bai-Li-NOAA 2 months ago
Labels: status: triage_needed
#658 - doc: remove notes containing syntax errors
Pull Request -
State: closed - Opened by Bai-Li-NOAA 2 months ago
- 2 comments
#658 - doc: remove notes containing syntax errors
Pull Request -
State: closed - Opened by Bai-Li-NOAA 2 months ago
- 2 comments
#657 - refactor nll cleanup
Pull Request -
State: closed - Opened by Andrea-Havron-NOAA 2 months ago
- 1 comment
#657 - refactor nll cleanup
Pull Request -
State: closed - Opened by Andrea-Havron-NOAA 2 months ago
- 1 comment
#656 - [Developer Issue]: actions/checkout@v3 uses deprecated Node.js version
Issue -
State: open - Opened by kellijohnson-NOAA 2 months ago
Labels: attribute: good first issue, kind: refactor, P3, attribute: low hanging 🍎, theme: code cleanup
#655 - 644 refactor nll cleanup
Pull Request -
State: closed - Opened by Andrea-Havron-NOAA 2 months ago
- 1 comment
#654 - Fix proportion female
Pull Request -
State: closed - Opened by kellijohnson-NOAA 2 months ago
- 3 comments
#653 - [Bug:] Inconsistent inputs for evaluate() functions in the recruitment module
Issue -
State: open - Opened by Bai-Li-NOAA 2 months ago
- 1 comment
Labels: kind: bug, P3, theme: code cleanup
#652 - Add documentation to Rcpp interfaces
Pull Request -
State: closed - Opened by Bai-Li-NOAA 2 months ago
- 4 comments
#651 - test: modularize R tests with helper functions and fixtures
Pull Request -
State: closed - Opened by Bai-Li-NOAA 2 months ago
- 2 comments
#650 - [Developer Issue]: Relocate and document FIMS folder descriptions
Issue -
State: open - Opened by Bai-Li-NOAA 3 months ago
- 2 comments
Labels: status: triage_needed
#650 - [Developer Issue]: Relocate and document FIMS folder descriptions
Issue -
State: open - Opened by Bai-Li-NOAA 3 months ago
- 1 comment
Labels: status: triage_needed
#649 - [Developer Issue]: Investigate the requirements for FIMS reproducibility
Issue -
State: open - Opened by Bai-Li-NOAA 3 months ago
- 3 comments
Labels: status: triage_needed
#648 - [Developer Issue]: create a vignette to demonstrate how to run FIMS in parallel
Issue -
State: open - Opened by Bai-Li-NOAA 3 months ago
Labels: kind: documentation, P3, theme: R interface, theme: documentation
#647 - Style code and document
Pull Request -
State: closed - Opened by ChristineStawitz-NOAA 3 months ago
- 2 comments
#647 - Style code and document
Pull Request -
State: closed - Opened by ChristineStawitz-NOAA 3 months ago
- 2 comments
#646 - [Developer Issue]: Refactor distribution interface
Issue -
State: open - Opened by Andrea-Havron-NOAA 3 months ago
Labels: kind: refactor, theme: NLL refactor, sprint 2
#645 - [Developer Issue]: Add variable_map
Issue -
State: open - Opened by Andrea-Havron-NOAA 3 months ago
- 5 comments
Labels: kind: feature, theme: NLL refactor, sprint 2
#644 - [Developer Issue]: refactor nll cleanup
Issue -
State: open - Opened by Andrea-Havron-NOAA 3 months ago
- 2 comments
Labels: status: triage_needed, kind: refactor, theme: NLL refactor, sprint 2
#644 - [Developer Issue]: refactor nll cleanup
Issue -
State: open - Opened by Andrea-Havron-NOAA 3 months ago
- 5 comments
Labels: status: triage_needed, kind: refactor, theme: NLL refactor, sprint 2
#643 - Style code and document
Pull Request -
State: closed - Opened by ChristineStawitz-NOAA 3 months ago
- 2 comments
#642 - refactor: Deletes issue and PR templates
Pull Request -
State: closed - Opened by kellijohnson-NOAA 3 months ago
- 3 comments
Labels: kind: documentation, P3, theme: documentation
#641 - Fix FIMSFrame
Pull Request -
State: closed - Opened by kellijohnson-NOAA 3 months ago
- 3 comments
Labels: kind: bug, kind: refactor, theme: R interface
#640 - Add an R test to run FIMS in parallel using {snowfall}
Pull Request -
State: closed - Opened by Bai-Li-NOAA 3 months ago
- 2 comments
#639 - [Bug]: `type.convert()` is reformatting date to character without leading zeros in data_mile1
Issue -
State: closed - Opened by kellijohnson-NOAA 3 months ago
- 2 comments
Labels: kind: bug, status: needs discussion, P1, theme: R interface
#638 - [Bug]: proportion female at age
Issue -
State: open - Opened by KyleShertzer-NOAA 3 months ago
- 2 comments
Labels: kind: bug, kind: documentation, kind: refactor, P3, theme: R interface, theme: code cleanup
#636 - Edit readme
Pull Request -
State: closed - Opened by k-doering-NOAA 3 months ago
- 4 comments
#635 - [Developer Issue]: Documenting things using Rcpp or C++
Issue -
State: open - Opened by kellijohnson-NOAA 3 months ago
Labels: kind: documentation, kind: question, status: needs discussion, P2, theme: documentation
#634 - [Developer Issue]: FIMS needs an overview document
Issue -
State: open - Opened by Bai-Li-NOAA 3 months ago
Labels: kind: documentation, theme: documentation
#633 - fix: Use native pipe instead of %>%
Pull Request -
State: closed - Opened by kellijohnson-NOAA 4 months ago
- 2 comments
#632 - Style code and document
Pull Request -
State: open - Opened by ChristineStawitz-NOAA 4 months ago
- 2 comments
#632 - Style code and document
Pull Request -
State: closed - Opened by ChristineStawitz-NOAA 4 months ago
- 2 comments
#631 - Fixes label on bug issue template and adds reprex guidance
Pull Request -
State: closed - Opened by kellijohnson-NOAA 4 months ago
- 2 comments
Labels: kind: bug, kind: documentation
#630 - document densities from sprint 1 nll refactor
Pull Request -
State: open - Opened by Andrea-Havron-NOAA 4 months ago
- 1 comment
#630 - document densities from sprint 1 nll refactor
Pull Request -
State: closed - Opened by Andrea-Havron-NOAA 4 months ago
- 2 comments
#629 - [Feature]: Specify input sample size for weight-at-age data
Issue -
State: open - Opened by kellijohnson-NOAA 4 months ago
- 1 comment
Labels: kind: feature, status: wishlist, status: needs discussion, P3, theme: NLL refactor
#629 - [Feature]: Specify input sample size for weight-at-age data
Issue -
State: open - Opened by kellijohnson-NOAA 4 months ago
Labels: kind: feature, status: wishlist, status: needs discussion, P3, theme: NLL refactor
#628 - fix(data_mile1): sd of log(x) instead of CV
Pull Request -
State: closed - Opened by kellijohnson-NOAA 4 months ago
- 3 comments
Labels: kind: bug, P3, theme: code cleanup
#628 - fix(data_mile1): sd of log(x) instead of CV
Pull Request -
State: closed - Opened by kellijohnson-NOAA 4 months ago
- 3 comments
Labels: kind: bug, P3, theme: code cleanup
#627 - [Feature]: Allow sdlog (or scalar multiplier) as estimable
Issue -
State: open - Opened by kellijohnson-NOAA 4 months ago
Labels: kind: feature, status: wishlist, P3, theme: NLL refactor
#627 - [Feature]: Allow sdlog (or scalar multiplier) as estimable
Issue -
State: open - Opened by kellijohnson-NOAA 4 months ago
Labels: kind: feature, status: wishlist, P3, theme: NLL refactor
#626 - GHA: add a workflow to build the pkgdown site on PR
Pull Request -
State: closed - Opened by Bai-Li-NOAA 4 months ago
- 3 comments
#626 - GHA: add a workflow to build the pkgdown site on PR
Pull Request -
State: open - Opened by Bai-Li-NOAA 4 months ago
- 2 comments
#625 - doc: add FIMS documentation vignette and organize vignettes
Pull Request -
State: open - Opened by Bai-Li-NOAA 4 months ago
- 2 comments
#625 - doc: add FIMS documentation vignette and organize vignettes
Pull Request -
State: closed - Opened by Bai-Li-NOAA 4 months ago
- 2 comments
#624 - Connect densities rebase of PR #619
Pull Request -
State: closed - Opened by Andrea-Havron-NOAA 4 months ago
- 1 comment
#624 - Connect densities rebase of PR #619
Pull Request -
State: closed - Opened by Andrea-Havron-NOAA 4 months ago
- 1 comment
#623 - 608 variable vector tests documentation
Pull Request -
State: closed - Opened by Andrea-Havron-NOAA 4 months ago
- 2 comments
#623 - 608 variable vector tests documentation
Pull Request -
State: closed - Opened by Andrea-Havron-NOAA 4 months ago
- 2 comments
#622 - [Bug]: FIMS runs regardless of the length of the `log_obs_error` and `log_Fmort` inputs
Issue -
State: open - Opened by Bai-Li-NOAA 4 months ago
- 1 comment
Labels: kind: bug, P1
#622 - [Bug]: FIMS runs regardless of the length of the `log_obs_error` and `log_Fmort` inputs
Issue -
State: open - Opened by Bai-Li-NOAA 4 months ago
Labels: kind: bug
#621 - [Developer Issue]: wrapper function to run a FIMS model
Issue -
State: open - Opened by kellijohnson-NOAA 4 months ago
Labels: kind: feature, P2, theme: r interface
#621 - [Developer Issue]: wrapper function to run a FIMS model
Issue -
State: open - Opened by kellijohnson-NOAA 4 months ago
- 2 comments
Labels: kind: feature, P2, theme: r interface
#620 - fix: use correct way of getting tmb output
Pull Request -
State: open - Opened by k-doering-NOAA 4 months ago
- 2 comments
Labels: kind: bug, vignette
#620 - fix: use correct way of getting tmb output
Pull Request -
State: open - Opened by k-doering-NOAA 4 months ago
- 2 comments
Labels: kind: bug, vignette
#619 - Connect densities
Pull Request -
State: closed - Opened by Andrea-Havron-NOAA 4 months ago
- 6 comments
#618 - Style code and document
Pull Request -
State: closed - Opened by ChristineStawitz-NOAA 4 months ago
- 2 comments
#618 - Style code and document
Pull Request -
State: closed - Opened by ChristineStawitz-NOAA 4 months ago
- 2 comments
#617 - [Feature]: calculate model start/end time, model call, and version of FIMS
Issue -
State: open - Opened by k-doering-NOAA 4 months ago
- 4 comments
Labels: kind: feature, status: triage_needed
#617 - [Feature]: calculate model start/end time, model call, and version of FIMS
Issue -
State: open - Opened by k-doering-NOAA 4 months ago
- 7 comments
Labels: kind: feature, theme: r interface
#616 - [Bug]: Difference in point estimates from tmb sdreport vs. tmb output object
Issue -
State: closed - Opened by k-doering-NOAA 4 months ago
- 26 comments
Labels: kind: bug, kind: vignette, theme: r interface
#615 - fix rec_nll evaluate bug
Pull Request -
State: closed - Opened by Andrea-Havron-NOAA 4 months ago
- 3 comments
Labels: kind: bug
#615 - fix rec_nll evaluate bug
Pull Request -
State: closed - Opened by Andrea-Havron-NOAA 4 months ago
- 3 comments
Labels: kind: bug
#614 - [Bug]: recruitment nll
Issue -
State: open - Opened by Andrea-Havron-NOAA 4 months ago
- 9 comments
Labels: kind: bug
#614 - [Bug]: recruitment nll
Issue -
State: closed - Opened by Andrea-Havron-NOAA 4 months ago
- 9 comments
Labels: kind: bug
#613 - [Developer Issue]: Add enum for nll_type
Issue -
State: open - Opened by Andrea-Havron-NOAA 4 months ago
Labels: kind: feature, theme: NLL refactor, sprint 2
#612 - [Developer Issue]: Add documentation to new files from refactor-distributions
Issue -
State: closed - Opened by Andrea-Havron-NOAA 4 months ago
- 1 comment
Labels: kind: documentation, theme: NLL refactor, sprint 1
#611 - Fix codecov (addresses #605)
Pull Request -
State: closed - Opened by k-doering-NOAA 4 months ago
- 6 comments
#610 - Refactor distributions
Pull Request -
State: closed - Opened by Andrea-Havron-NOAA 4 months ago
- 2 comments
#609 - [Developer Issue]: complete tests in test-unit-rcpp-interface-base-variable-vector
Issue -
State: closed - Opened by Andrea-Havron-NOAA 4 months ago
- 1 comment
Labels: kind: test case, theme: NLL refactor, sprint 1
#608 - [Developer Issue]: Add documentation to rcpp_interface_base on dev branch
Issue -
State: closed - Opened by Andrea-Havron-NOAA 4 months ago
- 1 comment
Labels: kind: documentation, theme: NLL refactor, sprint 1
#608 - [Developer Issue]: Add documentation to rcpp_interface_base on dev branch
Issue -
State: closed - Opened by Andrea-Havron-NOAA 4 months ago
- 1 comment
Labels: kind: documentation, theme: NLL refactor, sprint 1
#607 - Style code and document
Pull Request -
State: closed - Opened by ChristineStawitz-NOAA 4 months ago
- 1 comment
#606 - Make the R tests more modular
Issue -
State: open - Opened by Bai-Li-NOAA 4 months ago
- 4 comments
Labels: kind: test case, P3
#606 - Make the R tests more modular
Issue -
State: closed - Opened by Bai-Li-NOAA 4 months ago
- 4 comments
Labels: kind: test case, P3, theme: code cleanup
#605 - [Developer Issue]: code coverage not getting calculated for pull requests
Issue -
State: closed - Opened by iantaylor-NOAA 4 months ago
- 2 comments
Labels: kind: bug
#604 - Add vector variable to FIMS
Pull Request -
State: open - Opened by Andrea-Havron-NOAA 4 months ago
- 1 comment
#604 - Add vector variable to FIMS
Pull Request -
State: closed - Opened by Andrea-Havron-NOAA 4 months ago
- 1 comment
#603 - Add vector variable to FIMS
Pull Request -
State: closed - Opened by ChristineStawitz-NOAA 4 months ago
- 2 comments
#602 - fims::Vector operators and implicit scalar conversion
Pull Request -
State: open - Opened by msupernaw 4 months ago
- 6 comments
#601 - catch dev branch up with main
Pull Request -
State: closed - Opened by Andrea-Havron-NOAA 4 months ago
- 2 comments
#600 - [Feature]: estimate initial depletion
Issue -
State: open - Opened by ChristineStawitz-NOAA 4 months ago
Labels: case study features
#599 - Style code and document
Pull Request -
State: closed - Opened by ChristineStawitz-NOAA 5 months ago
- 2 comments
#599 - Style code and document
Pull Request -
State: closed - Opened by ChristineStawitz-NOAA 5 months ago
- 2 comments
#598 - [Developer Issue]: GHA: call-doc-and-style-r workflow failed to run due to SAML single sign-on
Issue -
State: closed - Opened by Bai-Li-NOAA 5 months ago
- 2 comments
Labels: status: triage_needed
#598 - [Developer Issue]: GHA: call-doc-and-style-r workflow failed to run due to SAML single sign-on
Issue -
State: closed - Opened by Bai-Li-NOAA 5 months ago
- 2 comments
Labels: status: triage_needed