nlmixr2/nlmixr2extra issues and pull requests

#72 - rm scm

Pull Request - State: closed - Opened by mattfidler 4 months ago

#71 - covarsearchauto not working with categorical variables

Issue - State: closed - Opened by danieleboaretti 4 months ago - 1 comment

#70 - Example code for using llp

Issue - State: open - Opened by lirui0321 5 months ago

#69 - 68 remove reference to rxode2parse and possible removed pkgs

Pull Request - State: closed - Opened by mattfidler 7 months ago

#68 - Remove reference to rxode2parse and possible removed pkgs

Issue - State: closed - Opened by mattfidler 7 months ago

#67 - Add se and sd with bug fix

Pull Request - State: closed - Opened by mattfidler 9 months ago

#66 - BootstrapFit 95CI calculation issue

Issue - State: closed - Opened by ZhonghuiHuang 10 months ago - 2 comments

#65 - linearization

Issue - State: open - Opened by mattfidler about 1 year ago

#64 - SCM filter result problem

Issue - State: open - Opened by junmoxiao66 about 1 year ago - 17 comments

#63 - Feature request: Allow `knit_print` for equations to have an argument of the maximum number of equations to include before a new `align*` block

Issue - State: open - Opened by billdenney about 1 year ago

#62 - SCM issue

Issue - State: open - Opened by mattfidler about 1 year ago - 1 comment

#61 - Add `$parFixed` update for boostrap

Issue - State: open - Opened by mattfidler over 1 year ago

#60 - na.rm more often to help avoid situations like #59

Pull Request - State: closed - Opened by mattfidler over 1 year ago

#59 - No bootstrap result due to matrix issues

Issue - State: closed - Opened by andreasmeid over 1 year ago - 6 comments

#58 - Add Bill Denney as an author

Pull Request - State: closed - Opened by billdenney over 1 year ago

#57 - add more braces

Pull Request - State: closed - Opened by billdenney over 1 year ago - 1 comment

#56 - switch extract_eq to knit_print

Pull Request - State: closed - Opened by billdenney almost 2 years ago

#55 - Equationmatic is off CRAN

Issue - State: closed - Opened by mattfidler almost 2 years ago

#54 - Drop `C++14`

Issue - State: closed - Opened by mattfidler almost 2 years ago

#52 - Discussion: Reconsider `extract_eq()` in favor of `knit_print(..., type = "equations")`?

Issue - State: closed - Opened by billdenney almost 2 years ago - 2 comments

#51 - Covariate search issue, it seems for backward search it has to look for "fit" object

Issue - State: open - Opened by snailittle almost 2 years ago - 2 comments

#50 - covariate search -- "object covInfo' not found error

Issue - State: open - Opened by snailittle almost 2 years ago - 1 comment

#49 - bootstrap error with gctorture/valgrind

Issue - State: closed - Opened by billdenney about 2 years ago - 2 comments

#48 - Switch all `\dontrun`s to `\donttest`s

Issue - State: open - Opened by billdenney about 2 years ago

#47 - SCM Example Fails in CI

Issue - State: open - Opened by billdenney about 2 years ago - 1 comment

#46 - `bootstrapFit()`, `lassoCoefficients()`, `adaptivelassoCoefficients()`, `regularmodel()`, and `adjustedlassoCoefficients()` Examples Cause CI to Fail

Issue - State: open - Opened by billdenney about 2 years ago - 4 comments

#45 - Make `bootstrapFit` quieter

Issue - State: open - Opened by billdenney about 2 years ago - 2 comments

#44 - Use `ui$varLhs` instead of pureMuRef when availalble.

Issue - State: open - Opened by mattfidler about 2 years ago

#43 - Remove pureMuRef

Issue - State: open - Opened by mattfidler about 2 years ago

#42 - qs:qserialize() zstd compression error

Issue - State: open - Opened by billdenney about 2 years ago

#41 - Remove duplicate code

Pull Request - State: closed - Opened by billdenney about 2 years ago - 1 comment

#40 - Feature Request: Extract the all bootstrap parameters

Issue - State: open - Opened by miriamkhayam about 2 years ago - 2 comments

#39 - Duplicated code

Issue - State: closed - Opened by billdenney about 2 years ago - 2 comments

#38 - Feature request: Enable distribution of estimation across a grid

Issue - State: open - Opened by billdenney about 2 years ago - 5 comments

#37 - Initial implementation of likelihood profiling

Pull Request - State: closed - Opened by billdenney about 2 years ago - 18 comments

#36 - Feature request: SAMBA

Issue - State: open - Opened by mattfidler about 2 years ago

#35 - Remove extra files

Pull Request - State: closed - Opened by billdenney about 2 years ago

#34 - Update README.Rmd to be less verbose

Pull Request - State: closed - Opened by billdenney about 2 years ago

#33 - Feature request: `tweakInits()`

Issue - State: open - Opened by billdenney about 2 years ago - 9 comments

#32 - Fix cli 3.4 restriction on dots (and a lot of whitespace removals)

Pull Request - State: closed - Opened by billdenney about 2 years ago

#31 - Readme.rmd example code fails to knit

Issue - State: closed - Opened by billdenney about 2 years ago - 2 comments

#30 - Update continuous integration

Pull Request - State: closed - Opened by billdenney about 2 years ago - 8 comments

#29 - Feature request: equations generation

Issue - State: closed - Opened by billdenney about 2 years ago - 1 comment

#28 - Initial commit of extract_eq() to generate LaTeX equations from models

Pull Request - State: closed - Opened by billdenney about 2 years ago - 6 comments

#27 - `covarSearchAuto` doesn't work with the example

Issue - State: open - Opened by mattfidler over 2 years ago - 1 comment

#26 - Check covariate selection information is stored in the fit.

Issue - State: open - Opened by mattfidler over 2 years ago - 1 comment

#25 - Integrate all the covariate selection mehods into one function,

Issue - State: open - Opened by mattfidler over 2 years ago - 1 comment

#24 - Missing horseshoe prior selection methd

Issue - State: open - Opened by mattfidler over 2 years ago - 1 comment

#23 - 22 use rxode2random

Pull Request - State: closed - Opened by mattfidler over 2 years ago

#22 - Use `rxode2random`

Issue - State: closed - Opened by mattfidler over 2 years ago

#21 - Add nlmixr2parse

Pull Request - State: closed - Opened by mattfidler over 2 years ago

#20 - nlmixr2extra with rxode2parse

Issue - State: closed - Opened by mattfidler over 2 years ago

#19 - 18 add built in model for testing

Pull Request - State: closed - Opened by mattfidler over 2 years ago

#18 - Add built-in model for testing.

Issue - State: closed - Opened by mattfidler over 2 years ago - 5 comments

#17 - Dev2

Pull Request - State: closed - Opened by vsarsani over 2 years ago - 10 comments

#16 - Ensure that all documentation examples run

Pull Request - State: closed - Opened by billdenney over 2 years ago - 1 comment

#15 - adaptivelassoCoefficients example gives error

Issue - State: closed - Opened by billdenney over 2 years ago - 4 comments

#14 - Fix documentation issues (with the help of emacs' check-parens function)

Pull Request - State: closed - Opened by billdenney over 2 years ago - 1 comment

#13 - Remove compiled files

Pull Request - State: closed - Opened by billdenney over 2 years ago - 1 comment

#12 - Unnecessary file? nlmixr2extra.dll

Issue - State: closed - Opened by billdenney over 2 years ago - 1 comment

#11 - Vsarsani dev2

Pull Request - State: closed - Opened by mattfidler over 2 years ago - 4 comments

#10 - Dev2

Pull Request - State: closed - Opened by vsarsani over 2 years ago - 4 comments

#9 - Refactor: SCM using mu-referencing

Issue - State: closed - Opened by mattfidler over 2 years ago

#7 - first commit

Pull Request - State: closed - Opened by vsarsani over 2 years ago

#6 - Feature Request: `nlmixr2.formula()` function

Issue - State: open - Opened by billdenney over 2 years ago - 1 comment

#5 - Add nlmixr_formula() (testable work in progress)

Pull Request - State: open - Opened by billdenney over 2 years ago - 9 comments

#4 - Valgrind Issues

Issue - State: closed - Opened by billdenney almost 3 years ago - 5 comments

#3 - SCM not always selecting the correct model

Issue - State: closed - Opened by mattfidler about 3 years ago

#1 - Feature request: profile function for log-likelihood profiling

Issue - State: closed - Opened by billdenney about 3 years ago - 8 comments

GitHub / nlmixr2/nlmixr2extra issues and pull requests