Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / nlmixr2/nlmixr2est issues and pull requests
#447 - huxtable not working right with tidy()
Issue -
State: open - Opened by mattfidler about 1 month ago
- 1 comment
#446 - glance returning the full list of objective functions
Issue -
State: open - Opened by mattfidler about 1 month ago
#445 - Fix() in the ini block does not work if saem was used
Issue -
State: closed - Opened by ZhonghuiHuang about 2 months ago
- 8 comments
#444 - 442 test for uninformative etas
Pull Request -
State: closed - Opened by mattfidler about 2 months ago
#443 - Problematic license of dependency lbfgsb3c
Issue -
State: open - Opened by rikardn about 2 months ago
- 1 comment
#442 - Test for uninformative `eta`s
Issue -
State: closed - Opened by mattfidler 2 months ago
#441 - amt and evid need to be missing for evid imputation
Pull Request -
State: closed - Opened by mattfidler 2 months ago
#440 - Feature request: on integration error, try a different set of parameters
Issue -
State: closed - Opened by billdenney 3 months ago
- 2 comments
#439 - Literal fix
Pull Request -
State: closed - Opened by mattfidler 3 months ago
#438 - Warfarin rik
Pull Request -
State: closed - Opened by mattfidler 3 months ago
#437 - Add predict estimation method and test it is the same as predict()
Pull Request -
State: closed - Opened by mattfidler 3 months ago
#436 - `est = "posthoc"` provides the same values for PRED and IPRED
Issue -
State: closed - Opened by billdenney 3 months ago
- 4 comments
#435 - "posthoc" estimation method requires a "DV" column
Issue -
State: closed - Opened by billdenney 3 months ago
- 1 comment
#434 - "posthoc" estimation method does not verify that IDs are the same
Issue -
State: closed - Opened by billdenney 3 months ago
- 4 comments
#433 - `"predict"` estimation method does not work
Issue -
State: closed - Opened by billdenney 3 months ago
- 1 comment
#432 - Question/documentation request: What is the difference between some of the `foceiControl()` arguments?
Issue -
State: open - Opened by billdenney 3 months ago
- 1 comment
#430 - 427 single solver per pre loaded
Pull Request -
State: closed - Opened by mattfidler 3 months ago
#428 - Feature request: Calculate shrinkage even when the covariance step fails
Issue -
State: closed - Opened by billdenney 4 months ago
- 3 comments
#427 - PopED mtime solver
Issue -
State: closed - Opened by mattfidler 4 months ago
#426 - fix checkmate assertions
Pull Request -
State: closed - Opened by mattfidler 4 months ago
#425 - 423 assertion on env$cov failed must be of type matrix not character should gracefully degrade and produce a captured warning
Pull Request -
State: closed - Opened by mattfidler 4 months ago
#424 - `print=0` doesn't seem to work
Issue -
State: closed - Opened by mattfidler 4 months ago
- 1 comment
#423 - Assertion on 'env$cov' failed: Must be of type 'matrix', not 'character' should gracefully degrade (and produce a captured warning)
Issue -
State: closed - Opened by mattfidler 4 months ago
#422 - Test for compressed ui not really working
Issue -
State: open - Opened by mattfidler 4 months ago
#421 - Update CI
Pull Request -
State: closed - Opened by billdenney 4 months ago
- 1 comment
#419 - TAD calculation inconsistent
Issue -
State: open - Opened by mattfidler 5 months ago
- 2 comments
#418 - `saem` non-informative `ETAs`
Issue -
State: closed - Opened by mattfidler 5 months ago
- 9 comments
#417 - No lin b
Pull Request -
State: closed - Opened by mattfidler 5 months ago
#416 - 415 nlmixr2est focei needs to cache based on thetaomega order
Pull Request -
State: closed - Opened by mattfidler 6 months ago
#415 - `nlmixr2est` focei needs to cache based on theta/omega order.
Issue -
State: closed - Opened by mattfidler 6 months ago
- 1 comment
#414 - Add ability to convert rxode2 ui to log-likelihood per ID (useful for MCMC types approaches like SAMBA).
Issue -
State: open - Opened by mattfidler 6 months ago
- 1 comment
#413 - 411 cran requests
Pull Request -
State: closed - Opened by mattfidler 7 months ago
#412 - Add update for `$parFixed`
Issue -
State: closed - Opened by mattfidler 7 months ago
#411 - CRAN
Issue -
State: closed - Opened by mattfidler 7 months ago
- 1 comment
#409 - Udf
Pull Request -
State: closed - Opened by mattfidler 8 months ago
#408 - Fix lbfgsb3c documentation
Pull Request -
State: closed - Opened by mattfidler 8 months ago
#407 - 406 optim
Pull Request -
State: closed - Opened by mattfidler 9 months ago
#406 - `optim`
Issue -
State: closed - Opened by mattfidler 9 months ago
#405 - 404 nls
Pull Request -
State: closed - Opened by mattfidler 9 months ago
#404 - `nls`
Issue -
State: closed - Opened by mattfidler 9 months ago
#403 - 402 nlm
Pull Request -
State: closed - Opened by mattfidler 9 months ago
#402 - `nlm`
Issue -
State: closed - Opened by mattfidler 9 months ago
#401 - V2.1.8
Pull Request -
State: closed - Opened by mattfidler 9 months ago
#400 - Update `$parFixed` and family based on different conditions
Issue -
State: open - Opened by mattfidler 9 months ago
#399 - Factor value that is part of `keep` is converted to numeric in the source data
Issue -
State: open - Opened by billdenney 10 months ago
- 1 comment
#398 - Fix for #397, needs test still
Pull Request -
State: closed - Opened by mattfidler 10 months ago
#397 - Custom backtransform doesn't apply correctly if there is no covariance step
Issue -
State: closed - Opened by mattfidler 10 months ago
#396 - V2.1.7
Pull Request -
State: closed - Opened by mattfidler 10 months ago
#395 - 394 error drugmetabolite modeing after zero oder absorption
Pull Request -
State: closed - Opened by mattfidler 10 months ago
- 1 comment
#394 - Error - Drug/metabolite modeing after zero oder absorption.
Issue -
State: closed - Opened by Lee21A 10 months ago
- 6 comments
#393 - Allow VPC with new data
Issue -
State: open - Opened by billdenney 10 months ago
#391 - Feature request: Warning for more $phiXXX and $etaXXX
Issue -
State: open - Opened by billdenney 10 months ago
- 1 comment
#390 - CRAN by 20 Sept 2023
Issue -
State: closed - Opened by mattfidler 11 months ago
#389 - Add `$fitMergeInner` family to output documentation.
Issue -
State: open - Opened by mattfidler 11 months ago
#388 - 387 sslag ettrans rxcontrol update
Pull Request -
State: closed - Opened by mattfidler 11 months ago
#387 - ssLag etTrans rxControl update
Issue -
State: closed - Opened by mattfidler 11 months ago
#386 - Remove unused code
Pull Request -
State: closed - Opened by billdenney 11 months ago
- 1 comment
#385 - `exists("missingTable", envir = env)` should always be `FALSE` at this location
Issue -
State: open - Opened by billdenney 11 months ago
- 1 comment
#384 - With a zero gradient always reset
Pull Request -
State: closed - Opened by mattfidler 12 months ago
- 1 comment
#383 - 376 make sure and test that fit$eta are non zero
Pull Request -
State: closed - Opened by mattfidler 12 months ago
#382 - Variable `hi` is unused
Issue -
State: open - Opened by billdenney 12 months ago
#381 - Quieter compile
Pull Request -
State: closed - Opened by billdenney 12 months ago
- 1 comment
#380 - Clarify keep argument to vpcSim()
Pull Request -
State: closed - Opened by billdenney 12 months ago
- 1 comment
#379 - Add Confidence intervals to ETAs
Issue -
State: open - Opened by mattfidler 12 months ago
#378 - add as.rxUi() method for fit objects
Pull Request -
State: closed - Opened by billdenney 12 months ago
#377 - Add `as.rxUi` method for model fits (nlmixr2FitCore objects)
Issue -
State: closed - Opened by billdenney 12 months ago
- 2 comments
#376 - Make sure and test that `fit$eta` are non-zero
Issue -
State: closed - Opened by mattfidler 12 months ago
- 1 comment
#375 - Debugging help: How can I trace an error that occurs before a model restart?
Issue -
State: open - Opened by billdenney about 1 year ago
- 11 comments
#374 - OFV Increase following what appears to be an integration error
Issue -
State: closed - Opened by billdenney about 1 year ago
- 2 comments
#373 - Add completion of `$phiC`
Issue -
State: closed - Opened by mattfidler about 1 year ago
#372 - SAEM fit has very large parameter jump at first parameter to a "wrong" value and I don't understand why.
Issue -
State: open - Opened by iamstein about 1 year ago
- 7 comments
#370 - Only keep $parHistData and calc $parHist and $parHistStacked
Pull Request -
State: closed - Opened by mattfidler about 1 year ago
#369 - nlmixr2::nlmixr2 for SAEM - implement live traceplot (as done for Monolix)
Issue -
State: open - Opened by iamstein about 1 year ago
- 2 comments
#368 - Bring back `$parHistData`
Issue -
State: closed - Opened by mattfidler about 1 year ago
#367 - Fix 366
Pull Request -
State: closed - Opened by billdenney about 1 year ago
- 1 comment
#366 - `$parFixed` shows incorrect BSV
Issue -
State: closed - Opened by billdenney about 1 year ago
- 6 comments
#365 - Zero gradient reset issue
Issue -
State: open - Opened by mattfidler about 1 year ago
#364 - Return fit without table if table step fails
Pull Request -
State: closed - Opened by mattfidler about 1 year ago
#363 - return fit without table when table step fails
Issue -
State: closed - Opened by mattfidler about 1 year ago
#362 - Sticky theta reset
Issue -
State: open - Opened by mattfidler about 1 year ago
#361 - R crash with saem estimation and window size change
Issue -
State: closed - Opened by billdenney about 1 year ago
- 2 comments
#360 - Fix #359
Pull Request -
State: closed - Opened by billdenney about 1 year ago
#359 - eta ~ 0 with correlated etas gives missing value error during printing
Issue -
State: closed - Opened by billdenney about 1 year ago
- 2 comments
#358 - However, as you pointed out, the bio-availability to the central compartment in `focei`'s linear compartment seems to not be working at all:
Issue -
State: open - Opened by mattfidler about 1 year ago
#357 - Add different method of fixing parameters in saem
Pull Request -
State: closed - Opened by mattfidler about 1 year ago
#356 - Provide different fixing mechanism for `saem`
Issue -
State: closed - Opened by mattfidler about 1 year ago
- 1 comment
#355 - Remove `BSV(SD)` and `Shrink(SD)%` columns from `$parFixed` data.frame for models without etas
Issue -
State: open - Opened by billdenney about 1 year ago
#354 - Add mu2 processing
Pull Request -
State: closed - Opened by mattfidler about 1 year ago
#353 - Add scaling for `saem`
Issue -
State: open - Opened by mattfidler about 1 year ago
#352 - Aug pred fix
Pull Request -
State: closed - Opened by mattfidler about 1 year ago
#351 - Adds documentation for the nlmixr2 object
Pull Request -
State: closed - Opened by john-harrold about 1 year ago
#350 - The warning now is shown below
Issue -
State: closed - Opened by mattfidler about 1 year ago
- 1 comment
#349 - Warn on time-varying covariate changes
Pull Request -
State: closed - Opened by mattfidler about 1 year ago
#348 - Problem with SAEM covariate modeling
Issue -
State: closed - Opened by roninsightrx about 1 year ago
- 24 comments
#347 - Add Regression optimization for time-varying covariates instead of simply mcmc?
Issue -
State: open - Opened by mattfidler about 1 year ago
#346 - Simplify numbers in `$parFixed`
Issue -
State: open - Opened by billdenney about 1 year ago
- 2 comments
#345 - Update documentation to link parts together (and some minor code formatting changes)
Pull Request -
State: closed - Opened by billdenney about 1 year ago
#344 - Suggestion: Deprecate `nlmixr2NlmeControl()`
Issue -
State: closed - Opened by billdenney about 1 year ago
- 2 comments
#343 - saem estimation not occurring in parallel
Issue -
State: closed - Opened by billdenney about 1 year ago
- 9 comments
#342 - vpcSim works with etas set to 0
Pull Request -
State: closed - Opened by billdenney about 1 year ago
- 6 comments