nleguillarme/taxonerd issues and pull requests

#26 - issue with init.taxonerd

Issue - State: open - Opened by jaum20 5 months ago - 2 comments

#25 - 404 error when installing taxonerd 1.5.4 in R

Issue - State: closed - Opened by maxfarrell 8 months ago - 2 comments

#24 - Error with gbif_backbone: TypeError: unsupported operand type(s) for |: 'type' and '_GenericAlias'

Issue - State: closed - Opened by lubianat 10 months ago - 4 comments

#23 - Failure to run: TypeError: issubclass() arg 1 must be a class

Issue - State: closed - Opened by lubianat 10 months ago - 1 comment

#22 - ERROR: Failed building wheel for nmslib

Issue - State: closed - Opened by serendipity-zhang over 1 year ago - 3 comments

#21 - Fix cui_to_entity indexing bug

Pull Request - State: open - Opened by serenalotreck over 1 year ago

#20 - `EntityLinker` can't index concept ID's in database for `ncbi_taxonomy`, and default KBs don't generate candidates

Issue - State: closed - Opened by serenalotreck over 1 year ago - 1 comment

#19 - Speed expectation -- what is "fast"?

Issue - State: closed - Opened by serenalotreck over 1 year ago - 2 comments

#18 - Custom reference taxonomies

Issue - State: closed - Opened by alrichardbollans over 1 year ago - 3 comments

#17 - errors using gbif_backbone entity linker

Issue - State: closed - Opened by mpoelchau over 1 year ago - 1 comment
Labels: bug

#16 - Install fails on Mac

Issue - State: open - Opened by dokterbob over 1 year ago - 1 comment

#15 - Keep only Latin species names?

Issue - State: closed - Opened by philippbayer over 1 year ago - 4 comments

#14 - Installing taxonerd in fresh conda environment - "error: command '/usr/bin/gcc' failed with exit code 1"

Issue - State: closed - Opened by Jason-B-Jiang almost 2 years ago - 2 comments

#13 - v1.5.2 "Not found" when attempting install

Issue - State: closed - Opened by maxfarrell almost 2 years ago - 3 comments

#12 - Issue with "inhomogeneous shape" during Entity Linking in v1.5.0

Issue - State: closed - Opened by maxfarrell almost 2 years ago - 5 comments

#11 - Issue with hybrid species

Issue - State: closed - Opened by philippbayer about 2 years ago - 2 comments

#10 - Hi

Issue - State: closed - Opened by julianflowers over 2 years ago - 2 comments

#9 - issue with install.taxonerd()

Issue - State: closed - Opened by julianflowers over 2 years ago - 5 comments

#8 - Force Span extension overwriting

Issue - State: closed - Opened by nleguillarme almost 3 years ago
Labels: bug

#7 - Issue with tokens included in more than one span

Issue - State: closed - Opened by maxfarrell almost 3 years ago - 7 comments
Labels: bug

#6 - In addition to linking reference taxonomy, TaxoNERD can link more user-defined contents？

Issue - State: closed - Opened by Otoliths about 3 years ago - 4 comments

#5 - Error in py_call_impl(callable, dots$args, dots$keywords) ||| R/taxonerd

Issue - State: closed - Opened by Otoliths about 3 years ago - 2 comments

#4 - Reaching more people!

Issue - State: open - Opened by ppertuzduran over 3 years ago - 1 comment

#3 - Remove unlinked entities

Issue - State: closed - Opened by nleguillarme over 3 years ago
Labels: enhancement

#2 - During entity linking, process abbreviated names separately