Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / njtierney/ttiq-simulation issues and pull requests

#52 - Ascertainment

Pull Request - State: open - Opened by dhduncan about 3 years ago - 5 comments

#51 - Master fix git fuckup

Pull Request - State: closed - Opened by goldingn over 3 years ago

#50 - Freya abm

Pull Request - State: closed - Opened by freyashearer over 3 years ago

#49 - Queue app params

Pull Request - State: open - Opened by loganbwu over 3 years ago

#47 - plugging the prioritisation outputs into the TP framework

Pull Request - State: closed - Opened by goldingn over 3 years ago

#46 - add illustrative ascertainment plot

Pull Request - State: closed - Opened by goldingn over 3 years ago

#45 - tidying up

Pull Request - State: closed - Opened by goldingn over 3 years ago

#44 - implement package based invalidation

Issue - State: open - Opened by njtierney over 3 years ago

#43 - Play with abm toy

Pull Request - State: closed - Opened by dhduncan over 3 years ago - 2 comments

#42 - tweaks for emergency plot-making

Pull Request - State: closed - Opened by goldingn over 3 years ago - 2 comments

#41 - babyM

Pull Request - State: closed - Opened by goldingn over 3 years ago

#40 - Data age based vaccine threshold

Pull Request - State: closed - Opened by njtierney over 3 years ago

#39 - A branch that needs to be eliminated

Issue - State: closed - Opened by dhduncan over 3 years ago - 3 comments

#38 - Sharing data fixes

Pull Request - State: closed - Opened by njtierney over 3 years ago

#37 - Some todos for sharing data

Issue - State: closed - Opened by njtierney over 3 years ago - 3 comments

#36 - Accounting for cases missed by active and passive detection

Issue - State: closed - Opened by njtierney over 3 years ago

#35 - Tracing queue plumb into tp

Pull Request - State: closed - Opened by njtierney over 3 years ago

#34 - Plumb queue into TP framework

Issue - State: closed - Opened by njtierney over 3 years ago - 1 comment

#33 - vary pr_vaccination_cases for different parameter levels

Issue - State: closed - Opened by njtierney over 3 years ago - 1 comment

#32 - Add tests

Pull Request - State: closed - Opened by njtierney over 3 years ago

#31 - Age weighted clinical fraction

Pull Request - State: closed - Opened by dhduncan over 3 years ago - 3 comments

#30 - implement {vdiffr} tests for regression testing plots

Issue - State: closed - Opened by njtierney over 3 years ago - 1 comment

#28 - Tracing queue

Pull Request - State: closed - Opened by cmbaker00 over 3 years ago - 2 comments

#27 - use dist_inflated rather than dist_mixture

Issue - State: open - Opened by njtierney over 3 years ago

#26 - progress on multiple parts of the vaccinated-specific TTIQ questions

Pull Request - State: closed - Opened by goldingn over 3 years ago

#25 - experiment: reduced isolation stringency for vaccinated cases, only for low-risk settings

Issue - State: closed - Opened by goldingn over 3 years ago
Labels: solved in branch

#25 - experiment: reduced isolation stringency for vaccinated cases, only for low-risk settings

Issue - State: closed - Opened by goldingn over 3 years ago
Labels: solved in branch

#24 - sensitivity test: reduced VE for onward transmission

Issue - State: closed - Opened by goldingn over 3 years ago - 1 comment
Labels: solved in branch

#23 - experiment: reduced isolation stringency for vaccinated

Issue - State: closed - Opened by goldingn over 3 years ago
Labels: solved in branch

#22 - experiment: no contact tracing from vaccinated

Issue - State: open - Opened by goldingn over 3 years ago

#21 - experiment: no passive detection for vaccinated

Issue - State: closed - Opened by goldingn over 3 years ago
Labels: solved in branch

#20 - Create empirical distributions to replace the poisson hurdle distributions

Pull Request - State: closed - Opened by dhduncan over 3 years ago - 4 comments

#19 - varying the proportion case zero parameters

Pull Request - State: closed - Opened by njtierney over 3 years ago

#18 - Add next generation matrices

Pull Request - State: closed - Opened by njtierney over 3 years ago

#17 - create new target for probability of passive detection

Issue - State: closed - Opened by dhduncan over 3 years ago

#16 - replace poisson hurdle model with empirical distribution

Issue - State: closed - Opened by dhduncan over 3 years ago - 5 comments

#15 - Vicdata

Pull Request - State: closed - Opened by loganbwu over 3 years ago - 3 comments

#14 - Tweak align style ttiq

Pull Request - State: closed - Opened by njtierney over 3 years ago

#13 - Histogram fraction not adding to 1

Issue - State: closed - Opened by loganbwu over 3 years ago - 1 comment

#12 - Refactor generalise data source

Pull Request - State: closed - Opened by njtierney over 3 years ago

#11 - fix dynamically labelling of the histograms

Issue - State: closed - Opened by njtierney over 3 years ago - 1 comment

#10 - generalisations to make to work with other data sources

Issue - State: closed - Opened by njtierney over 3 years ago

#9 - plot the current model definition

Issue - State: closed - Opened by goldingn over 3 years ago - 2 comments

#7 - include passive case detection delays

Pull Request - State: closed - Opened by goldingn over 3 years ago

#6 - switch to poisson hurdle model for delays

Pull Request - State: closed - Opened by goldingn over 3 years ago

#5 - update plot of delay data

Pull Request - State: closed - Opened by goldingn over 3 years ago

#4 - Uses 1) Optimal 2) current and 3) current + case initiated

Pull Request - State: closed - Opened by njtierney over 3 years ago

#2 - Efficiently re-run simulations

Issue - State: open - Opened by njtierney over 3 years ago

#1 - use `distributional` for sampling distributions

Issue - State: closed - Opened by njtierney over 3 years ago