Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / nipreps/nibabies issues and pull requests
#315 - Build(deps): Bump urllib3 from 2.0.3 to 2.0.6
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
- 2 comments
Labels: dependencies
#314 - DKR: Add bc for FreeSurfer recons
Pull Request -
State: closed - Opened by mgxd about 1 year ago
- 1 comment
#314 - DKR: Add bc for FreeSurfer recons
Pull Request -
State: closed - Opened by mgxd about 1 year ago
- 1 comment
#313 - ENH: Add MSMSulc
Pull Request -
State: open - Opened by mgxd about 1 year ago
- 1 comment
#313 - ENH: Add MSMSulc
Pull Request -
State: open - Opened by mgxd about 1 year ago
#312 - infantFS recon error due to "bc" not found
Issue -
State: closed - Opened by madisoth about 1 year ago
Labels: bug
#311 - Beef up documentation
Issue -
State: open - Opened by mgxd about 1 year ago
Labels: documentation, enhancement
#311 - Beef up documentation
Issue -
State: open - Opened by mgxd about 1 year ago
Labels: documentation, enhancement
#310 - CI: Fix output order
Pull Request -
State: closed - Opened by mgxd about 1 year ago
- 3 comments
#310 - CI: Fix output order
Pull Request -
State: closed - Opened by mgxd about 1 year ago
- 3 comments
#309 - ValueError: BinaryDilation requires a value for input 'in_file' (using MCRIBS recon w/ precomputed mask)
Issue -
State: closed - Opened by madisoth about 1 year ago
Labels: bug
#308 - Build(deps): Bump tornado from 6.3.2 to 6.3.3
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
- 1 comment
Labels: dependencies
#307 - Allow skullstripped inputs
Issue -
State: open - Opened by mgxd about 1 year ago
#305 - ENH+RF: Allow precomputed derivatives in T1w or T2w space
Pull Request -
State: closed - Opened by mgxd about 1 year ago
- 2 comments
#304 - Mismatch in image and mask size due to change in pixel dimensions during t1w_template_wf
Issue -
State: open - Opened by moser297 about 1 year ago
- 2 comments
Labels: bug
#304 - Mismatch in image and mask size due to change in pixel dimensions during t1w_template_wf
Issue -
State: closed - Opened by moser297 about 1 year ago
- 3 comments
Labels: bug
#303 - Build(deps): Bump certifi from 2023.5.7 to 2023.7.22
Pull Request -
State: open - Opened by dependabot[bot] about 1 year ago
Labels: dependencies
#303 - Build(deps): Bump certifi from 2023.5.7 to 2023.7.22
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies
#302 - RF: Update Docker build
Pull Request -
State: closed - Opened by mgxd over 1 year ago
- 1 comment
#302 - RF: Update Docker build
Pull Request -
State: closed - Opened by mgxd over 1 year ago
- 1 comment
#301 - FIX: Goodvoxel projection
Pull Request -
State: closed - Opened by mgxd over 1 year ago
#301 - FIX: Goodvoxel projection
Pull Request -
State: closed - Opened by mgxd over 1 year ago
#300 - FIX: "Goodvoxels" projection
Pull Request -
State: closed - Opened by mgxd over 1 year ago
- 1 comment
#300 - FIX: "Goodvoxels" projection
Pull Request -
State: closed - Opened by mgxd over 1 year ago
- 1 comment
#298 - FIX: restore cifti medial wall masking, subcortical volume LAS reorientation
Pull Request -
State: closed - Opened by madisoth over 1 year ago
- 1 comment
#298 - FIX: restore cifti medial wall masking, subcortical volume LAS reorientation
Pull Request -
State: closed - Opened by madisoth over 1 year ago
- 1 comment
#297 - mcribs surfaces misaligned to anat after fix_surfs node
Issue -
State: closed - Opened by madisoth over 1 year ago
- 1 comment
Labels: bug
#297 - mcribs surfaces misaligned to anat after fix_surfs node
Issue -
State: closed - Opened by madisoth over 1 year ago
- 1 comment
Labels: bug
#296 - ENH: Dilate BOLD mask by 2 voxels to prevent over-aggressive masking degrading T2* map estimation
Pull Request -
State: closed - Opened by effigies over 1 year ago
- 1 comment
#296 - ENH: Dilate BOLD mask by 2 voxels to prevent over-aggressive masking degrading T2* map estimation
Pull Request -
State: closed - Opened by effigies over 1 year ago
- 1 comment
#295 - Dilated the BOLD mask input to t2smap
Issue -
State: closed - Opened by madisoth over 1 year ago
Labels: enhancement
#294 - Add `auto` option to `--surface-recon-method`
Issue -
State: open - Opened by mgxd over 1 year ago
- 1 comment
Labels: enhancement
#294 - Add `auto` option to `--surface-recon-method`
Issue -
State: open - Opened by mgxd over 1 year ago
- 1 comment
Labels: enhancement
#293 - Allow ingress of segmentations in different spaces through --derivatives flag
Issue -
State: closed - Opened by hough129 over 1 year ago
Labels: enhancement
#293 - Allow ingress of segmentations in different spaces through --derivatives flag
Issue -
State: open - Opened by hough129 over 1 year ago
Labels: enhancement
#292 - FIX: Remove duplicated connections
Pull Request -
State: closed - Opened by mgxd over 1 year ago
- 1 comment
#291 - FIX: Ensure age from sessions file is not overriden
Pull Request -
State: closed - Opened by mgxd over 1 year ago
- 1 comment
#291 - FIX: Ensure age from sessions file is not overriden
Pull Request -
State: closed - Opened by mgxd over 1 year ago
- 1 comment
#290 - MNT: Drop templateflow patches after smriprep changes
Pull Request -
State: closed - Opened by mgxd over 1 year ago
#289 - CI: Fix dev image name
Pull Request -
State: closed - Opened by mgxd over 1 year ago
#288 - Alter FreeSurfer subjects to include session labels
Issue -
State: closed - Opened by mgxd over 1 year ago
- 1 comment
Labels: enhancement
#287 - ENH: Extract participant ages from BIDS sources
Pull Request -
State: closed - Opened by mgxd over 1 year ago
- 1 comment
#286 - RF: Anatomical processing
Pull Request -
State: closed - Opened by mgxd over 1 year ago
- 1 comment
#285 - DEP: Test with latest preps
Pull Request -
State: closed - Opened by mgxd over 1 year ago
#284 - FIX: Estimate free memory with available, not free
Pull Request -
State: closed - Opened by mgxd over 1 year ago
#283 - ENH: Add M-CRIB-S surface processing
Pull Request -
State: closed - Opened by mgxd over 1 year ago
- 1 comment
#282 - MAINT: Purge removed codecov python package
Pull Request -
State: closed - Opened by mgxd over 1 year ago
#281 - FIX: Create FreeSurfer directories
Pull Request -
State: closed - Opened by mgxd over 1 year ago
#280 - ENH: Testing MCRIBS integration
Pull Request -
State: closed - Opened by mgxd over 1 year ago
- 1 comment
#280 - ENH: Testing MCRIBS integration
Pull Request -
State: closed - Opened by mgxd over 1 year ago
- 1 comment
#279 - ENH: Resample morphometrics to fsLR dscalar CIFTI-2 files if ``--cifti-output`` is used
Pull Request -
State: closed - Opened by effigies over 1 year ago
#279 - ENH: Resample morphometrics to fsLR dscalar CIFTI-2 files if ``--cifti-output`` is used
Pull Request -
State: closed - Opened by effigies over 1 year ago
#278 - ENH: Add option to exclude projecting high variance voxels to surface
Pull Request -
State: closed - Opened by madisoth over 1 year ago
- 1 comment
#277 - ENH: Add method to generate config file
Pull Request -
State: closed - Opened by mgxd over 1 year ago
#276 - ENH: Add MIRTK to docker container
Pull Request -
State: closed - Opened by mgxd over 1 year ago
- 1 comment
#276 - ENH: Add MIRTK to docker container
Pull Request -
State: closed - Opened by mgxd over 1 year ago
- 1 comment
#275 - MNT: Upgrade Docker base, c3d
Pull Request -
State: closed - Opened by mgxd over 1 year ago
#275 - MNT: Upgrade Docker base, c3d
Pull Request -
State: closed - Opened by mgxd over 1 year ago
#274 - Surface Morphometrics in fsLR 32k space
Issue -
State: closed - Opened by hough129 over 1 year ago
- 1 comment
Labels: enhancement
#273 - REL: 23.0.0
Pull Request -
State: closed - Opened by mgxd over 1 year ago
#273 - REL: 23.0.0
Pull Request -
State: closed - Opened by mgxd over 1 year ago
#272 - FIX: Remove unused ANTs parameter that was removed in 2.4.1
Pull Request -
State: closed - Opened by effigies over 1 year ago
#272 - FIX: Remove unused ANTs parameter that was removed in 2.4.1
Pull Request -
State: open - Opened by effigies over 1 year ago
#271 - ENH: Add preprocessed T2w volume to outputs
Pull Request -
State: closed - Opened by madisoth over 1 year ago
#271 - ENH: Add preprocessed T2w volume to outputs
Pull Request -
State: closed - Opened by madisoth over 1 year ago
#270 - Remap labels from FreeSurfer aseg to MCRIB
Pull Request -
State: closed - Opened by madisoth over 1 year ago
#270 - Remap labels from FreeSurfer aseg to MCRIB
Pull Request -
State: closed - Opened by madisoth over 1 year ago
#269 - MIRTK integration
Pull Request -
State: closed - Opened by effigies over 1 year ago
- 3 comments
#268 - ENH: Runwise bold reference generation
Pull Request -
State: closed - Opened by mgxd over 1 year ago
#268 - ENH: Runwise bold reference generation
Pull Request -
State: closed - Opened by mgxd over 1 year ago
#267 - CI: Bump convenience images, limit datalad
Pull Request -
State: closed - Opened by mgxd almost 2 years ago
#267 - CI: Bump convenience images, limit datalad
Pull Request -
State: closed - Opened by mgxd almost 2 years ago
#266 - MAINT: Rotate CircleCI secrets and setup up org-level context
Pull Request -
State: closed - Opened by oesteban almost 2 years ago
#265 - MAINT: Drop versioneer for hatch backend, fully embrace pyproject.toml
Pull Request -
State: closed - Opened by mgxd almost 2 years ago
- 2 comments
#265 - MAINT: Drop versioneer for hatch backend, fully embrace pyproject.toml
Pull Request -
State: closed - Opened by mgxd almost 2 years ago
- 2 comments
#264 - FIX: Remove legacy CIFTI variant support
Pull Request -
State: closed - Opened by mgxd almost 2 years ago
#264 - FIX: Remove legacy CIFTI variant support
Pull Request -
State: closed - Opened by mgxd almost 2 years ago
#263 - BIDSConflictingValuesError for entity "space" in CIFTI func derivatives
Issue -
State: closed - Opened by madisoth almost 2 years ago
Labels: bug
#262 - ENH: Remap segmentation volume labels from aseg to MCRIBS-compatible format
Pull Request -
State: closed - Opened by madisoth almost 2 years ago
- 2 comments
#262 - ENH: Remap segmentation volume labels from aseg to MCRIBS-compatible format
Pull Request -
State: closed - Opened by madisoth almost 2 years ago
- 2 comments
#260 - DEP: Pin sdcflows to minor series
Pull Request -
State: closed - Opened by mgxd almost 2 years ago
#260 - DEP: Pin sdcflows to minor series
Pull Request -
State: closed - Opened by mgxd almost 2 years ago
#259 - ENH: Anat wf saves T2 volume in T1 space as derivative output file
Pull Request -
State: closed - Opened by GregConan almost 2 years ago
- 1 comment
#258 - FIX: Remove cortex masking during vol2surf sampling
Pull Request -
State: closed - Opened by mgxd almost 2 years ago
#258 - FIX: Remove cortex masking during vol2surf sampling
Pull Request -
State: closed - Opened by mgxd almost 2 years ago
#257 - ENH: Improve migas telemetry
Pull Request -
State: closed - Opened by mgxd almost 2 years ago
#257 - ENH: Improve migas telemetry
Pull Request -
State: closed - Opened by mgxd almost 2 years ago
#256 - CI: GitHub actions update
Pull Request -
State: closed - Opened by mgxd almost 2 years ago
#255 - ENH: Add morphometric outputs
Pull Request -
State: closed - Opened by mgxd almost 2 years ago
#255 - ENH: Add morphometric outputs
Pull Request -
State: closed - Opened by mgxd almost 2 years ago
#254 - Distortion corrected images look distorted in the opposite direction (AP for PA acquisition)
Issue -
State: open - Opened by moser297 almost 2 years ago
Labels: bug, in-progress
#254 - Distortion corrected images look distorted in the opposite direction (AP for PA acquisition)
Issue -
State: closed - Opened by moser297 almost 2 years ago
- 2 comments
Labels: bug
#253 - Change in reference frame for motion correction in single echo and multi echo data
Issue -
State: closed - Opened by moser297 almost 2 years ago
Labels: enhancement
#253 - Change in reference frame for motion correction in single echo and multi echo data
Issue -
State: closed - Opened by moser297 almost 2 years ago
Labels: enhancement
#252 - ENH: Output T2star maps for multiecho data
Pull Request -
State: closed - Opened by mgxd almost 2 years ago
#252 - ENH: Output T2star maps for multiecho data
Pull Request -
State: closed - Opened by mgxd almost 2 years ago
#251 - Output a label volume of the resampled-to-atlas subcortical ROIs
Issue -
State: open - Opened by madisoth almost 2 years ago
Labels: enhancement
#251 - Output a label volume of the resampled-to-atlas subcortical ROIs
Issue -
State: open - Opened by madisoth almost 2 years ago
Labels: enhancement
#250 - ENH: Add ReconNeonatalCortex interface
Pull Request -
State: closed - Opened by effigies almost 2 years ago
- 3 comments
Labels: enhancement
#250 - ENH: Add ReconNeonatalCortex interface
Pull Request -
State: closed - Opened by effigies almost 2 years ago
- 3 comments
Labels: enhancement