nickreich/coarsedatatools issues and pull requests

#60 - Add pkgdown

Pull Request - State: closed - Opened by nickreich over 1 year ago

#59 - updating to v0.7, including changes from @Bisaloo

Pull Request - State: closed - Opened by nickreich over 1 year ago - 2 comments

#58 - Set up lintr continuous integration and fix lints

Pull Request - State: closed - Opened by Bisaloo over 1 year ago - 1 comment

#57 - implement WAIC and LOOIC metrics

Issue - State: open - Opened by nickreich almost 2 years ago

#56 - updating documentation just based on roxygen2 versioning.

Pull Request - State: closed - Opened by nickreich almost 3 years ago - 1 comment

#55 - moving vignette from Rnw to Rmd.

Pull Request - State: closed - Opened by nickreich almost 3 years ago - 1 comment

#54 - fix cran warnings

Issue - State: closed - Opened by nickreich almost 3 years ago - 1 comment

#53 - update CRAN version?

Issue - State: closed - Opened by nickreich over 3 years ago

#52 - Different model types and estimates of reporting rates

Issue - State: open - Opened by psyguy over 4 years ago

#51 - Update documents to pass CRAN check

Pull Request - State: closed - Opened by zkamvar over 5 years ago - 4 comments

#50 - merging with Hackout3 branch

Pull Request - State: closed - Opened by nickreich over 5 years ago

#49 - Request to pull the hackout 3 branch into master

Issue - State: closed - Opened by zkamvar over 5 years ago - 3 comments

#48 - Provide a `seed` argument for MCMCPack

Pull Request - State: closed - Opened by jstockwin over 7 years ago - 3 comments

#47 - Add off1W and off1L distributions

Pull Request - State: closed - Opened by robin-thompson over 7 years ago

#46 - Fix dependencies

Issue - State: closed - Opened by nickreich over 8 years ago - 1 comment

#45 - MCMC needs manual seed setting

Issue - State: closed - Opened by nickreich over 8 years ago - 2 comments

#44 - package throwing warning

Issue - State: closed - Opened by nickreich almost 9 years ago - 6 comments

#43 - replace package dependencies with namespace directives

Issue - State: closed - Opened by nickreich over 11 years ago - 5 comments

#42 - update erlang default prior documentation

Issue - State: closed - Opened by scottyaz over 11 years ago
Labels: version 0.6

#41 - improve default prior parameter settings

Issue - State: closed - Opened by scottyaz over 11 years ago
Labels: Enchancement

#41 - improve default prior parameter settings

Issue - State: closed - Opened by scottyaz over 11 years ago
Labels: Enchancement

#40 - Comprehensive test script needed for validating code changes

Issue - State: open - Opened by jlessler over 11 years ago
Labels: Enchancement

#39 - Error handling throughout code obfuscates true errors

Issue - State: open - Opened by jlessler over 11 years ago
Labels: Enchancement

#38 - add check for valid percentiles

Issue - State: closed - Opened by scottyaz over 11 years ago
Labels: version 0.6

#37 - add other data distributions to the generate.coarse.data() function

Issue - State: open - Opened by nickreich over 11 years ago
Labels: Enchancement

#36 - logLik returns -Inf for MCMC fit to the Erlang distribution

Issue - State: closed - Opened by jlessler over 11 years ago - 2 comments

#35 - ?plot(x) when x is cd.fit doesn't give man page

Issue - State: open - Opened by scottyaz over 11 years ago - 2 comments
Labels: Enchancement

#34 - dic.fit fails for Gamma when ptiles other than the default are specified

Issue - State: closed - Opened by jlessler over 11 years ago - 2 comments
Labels: version 0.6

#33 - Documentation for dic.fit claims Erlang

Issue - State: closed - Opened by jlessler over 11 years ago

#32 - logLik returns -Inf for MCMC fits other than log normal

Issue - State: closed - Opened by jlessler over 11 years ago - 2 comments
Labels: version 0.6

#31 - R CMD CHECK issues

Issue - State: closed - Opened by nickreich over 11 years ago
Labels: version 0.6

#30 - add loglik to output of cd.fit.mcmc

Issue - State: closed - Opened by scottyaz over 11 years ago - 1 comment
Labels: Enchancement

#29 - add bounds of parameters to doc files for dic.fit.mcmc and dic.fit

Issue - State: open - Opened by nickreich over 11 years ago - 1 comment
Labels: Enchancement

#28 - document S4 objects cd.fit and cd.fit.mcmc

Issue - State: closed - Opened by nickreich over 11 years ago
Labels: version 0.6

#27 - mcmc.fit documentation makes no sense for prior distributions

Issue - State: closed - Opened by jlessler over 11 years ago - 4 comments
Labels: version 0.6

#26 - Default priors lead to necessary failure for log-normal distribution in dic.fit.mcmc

Issue - State: closed - Opened by jlessler over 11 years ago

#25 - no option for adding plots to an existing graph

Issue - State: closed - Opened by jlessler over 11 years ago
Labels: Enchancement

#24 - logLik returns numeric(0) for mcmc fits

Issue - State: closed - Opened by jlessler over 11 years ago
Labels: version 0.6

#23 - boostrap code could be sped up with matrices

Issue - State: open - Opened by jlessler over 11 years ago
Labels: Enchancement, speed improvement

#22 - Inaccurate comment in dic.fit

Issue - State: closed - Opened by jlessler over 11 years ago
Labels: version 0.6

#21 - dic.fit.mcmc and get.obs.types not available.

Issue - State: closed - Opened by scottyaz over 11 years ago

#20 - check weibull asymptotic calculations

Issue - State: closed - Opened by nickreich over 11 years ago
Labels: version 0.6

#19 - Make a vignette for incubation period analyses

Issue - State: open - Opened by nickreich over 11 years ago
Labels: Enchancement

#18 - document non DIC functions.

Issue - State: closed - Opened by nickreich over 11 years ago
Labels: version 0.6

#17 - reformat ests matrix

Issue - State: closed - Opened by nickreich over 11 years ago - 2 comments
Labels: Enchancement

#16 - documentation for plot method

Issue - State: closed - Opened by nickreich over 11 years ago - 4 comments
Labels: version 0.6

#15 - Rd files for datasets

Issue - State: closed - Opened by nickreich over 11 years ago
Labels: version 0.6

#14 - clarify parameters

Issue - State: closed - Opened by nickreich over 11 years ago - 9 comments

#13 - documentation of bootstrapping in dic.fit()

Issue - State: closed - Opened by nickreich over 11 years ago - 4 comments
Labels: version 0.6

#12 - units issue

Issue - State: closed - Opened by nickreich over 11 years ago

#11 - documentation of dic.fit()

Issue - State: closed - Opened by nickreich over 11 years ago

#10 - add ability to run multiple chains with dic.fit.mcmc()

Issue - State: open - Opened by scottyaz over 11 years ago
Labels: Enchancement

#9 - another pull request

Pull Request - State: closed - Opened by scottyaz over 11 years ago

#8 - dic.getSE() does not get SEs for bootstrap

Issue - State: closed - Opened by nickreich over 11 years ago
Labels: Enchancement, version 0.6

#7 - add user specified priors to dic.fit.mcmc

Issue - State: open - Opened by nickreich over 11 years ago
Labels: Enchancement

#6 - asymptotic results for quantiles of Gamma

Issue - State: open - Opened by scottyaz over 11 years ago
Labels: Enchancement

#5 - erlang distribution

Issue - State: closed - Opened by nickreich over 11 years ago - 1 comment
Labels: Enchancement, version 0.6

#4 - change dist labels

Issue - State: closed - Opened by nickreich over 11 years ago - 2 comments
Labels: Enchancement

#3 - optim options

Issue - State: closed - Opened by nickreich over 11 years ago - 5 comments
Labels: version 0.6

#2 - optimize if statements

Issue - State: open - Opened by nickreich over 11 years ago - 1 comment
Labels: Enchancement, speed improvement

#1 - updates for next version (mcmc, bootstrap, multiple distributions)

Pull Request - State: closed - Opened by scottyaz over 11 years ago

GitHub / nickreich/coarsedatatools issues and pull requests