Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / nglviewer/ngl issues and pull requests

#957 - Fix PDBQT parser for wrong H elements interpolation

Pull Request - State: closed - Opened by papillot almost 2 years ago

#956 - How to convert the coordinates of 8 points of a cube into a BoxBuffer

Issue - State: closed - Opened by flybirdGit almost 2 years ago - 4 comments

#955 - V3000 support

Pull Request - State: closed - Opened by papillot almost 2 years ago - 1 comment

#954 - Get Object data of Selected Shape

Issue - State: closed - Opened by spadavec almost 2 years ago - 1 comment

#953 - Load PDB being hosted locally by Flask Server

Issue - State: closed - Opened by spadavec almost 2 years ago - 1 comment

#952 - Cylinder with top and bottom radius

Issue - State: closed - Opened by britesma almost 2 years ago - 1 comment

#951 - Sonarcloud

Pull Request - State: closed - Opened by sjackson-ccdc almost 2 years ago

#950 - NGL shows white color for this cif

Issue - State: closed - Opened by hainm almost 2 years ago - 3 comments
Labels: bug

#949 - Make atom names unique only within a model for SDF

Pull Request - State: closed - Opened by yitzchak almost 2 years ago - 8 comments

#948 - Add CodeQL workflow for GitHub code scanning

Pull Request - State: open - Opened by lgtm-com[bot] almost 2 years ago

#947 - can *.mrc files be rendered via nglviewer?

Issue - State: closed - Opened by hanliu0119 almost 2 years ago - 1 comment

#946 - Inquiry support drawing a path from one residue to another residue

Issue - State: open - Opened by juexinwang about 2 years ago - 1 comment

#945 - Subscription to render completion

Issue - State: closed - Opened by StLeonidas about 2 years ago - 2 comments

#944 - Support V3000 in sdf-parser.ts

Pull Request - State: closed - Opened by pablowatson about 2 years ago - 5 comments

#943 - Support for residue mapping from UniProt to PDB structure?

Issue - State: open - Opened by nabinchaulagain about 2 years ago - 1 comment
Labels: enhancement

#942 - Proposal - changing structure.refreshed signal and logic

Pull Request - State: closed - Opened by fredludlow about 2 years ago - 4 comments

#941 - fix: don't dispose structure

Pull Request - State: closed - Opened by sto3psl over 2 years ago - 3 comments

#940 - rainbow spectrum color legend

Issue - State: closed - Opened by paolobareng over 2 years ago - 1 comment

#939 - How to open URL by clicking residue?

Issue - State: closed - Opened by kistlerk over 2 years ago

#938 - Bfactor custom color in R shiny app

Issue - State: closed - Opened by paolobareng over 2 years ago - 2 comments

#937 - Is there a way for mol2 file to display aromatic rings?

Issue - State: closed - Opened by QDMarkMan over 2 years ago - 3 comments

#936 - Trouble coloring all atoms by residue

Issue - State: closed - Opened by kistlerk over 2 years ago - 1 comment

#935 - Current chrome has horked canvas? with ngl.

Issue - State: closed - Opened by phobrain over 2 years ago - 2 comments

#934 - dynamics? animation, simulation...

Issue - State: closed - Opened by paul-shannon over 2 years ago - 3 comments

#933 - cannot set label size ?

Issue - State: closed - Opened by seongsangcho-hits over 2 years ago - 1 comment

#932 - help with broken .cif file?

Issue - State: closed - Opened by colin-combe over 2 years ago - 1 comment

#931 - How to merge multiple pdbs?

Issue - State: closed - Opened by seongsangcho-hits over 2 years ago - 1 comment

#930 - Add tutorial to NGL

Issue - State: open - Opened by Brandontam29 over 2 years ago

#929 - Housekeeping

Pull Request - State: closed - Opened by fredludlow over 2 years ago - 2 comments

#928 - How to draw a line connecting two residues?

Issue - State: closed - Opened by samuelflores over 2 years ago - 6 comments

#927 - How to control in with defaultRepresentation ?

Issue - State: closed - Opened by neriaaa46 over 2 years ago - 2 comments

#926 - Enable three.js treeshaking with three-minifier-rollup

Pull Request - State: closed - Opened by milot-mirdita over 2 years ago - 5 comments

#922 - Use stable angle method (atan2) to avoid precision problems in dihedr…

Pull Request - State: closed - Opened by fredludlow over 2 years ago - 1 comment

#921 - Superpose different viewers

Issue - State: closed - Opened by gbayarri over 2 years ago - 2 comments

#919 - Loading of mmtf fails with sd.xCoordList is undefined

Issue - State: closed - Opened by fredricj over 2 years ago - 2 comments

#918 - How to use NGL in vue

Issue - State: closed - Opened by dahaigui over 2 years ago - 11 comments

#916 - Setup Github Actions

Pull Request - State: closed - Opened by fredludlow over 2 years ago - 2 comments

#915 - When will be the next stable release?

Issue - State: closed - Opened by panda-byte over 2 years ago - 14 comments

#909 - Feature/rotate selection and pivot

Pull Request - State: open - Opened by garyo almost 3 years ago - 4 comments

#906 - Improve typing of "impostorable" buffers

Pull Request - State: closed - Opened by luxaritas almost 3 years ago - 4 comments

#904 - Don't mutate colorDomain in place when colorReverse is true

Pull Request - State: closed - Opened by fredludlow almost 3 years ago

#899 - Is there a way to generate specified data(string or file) from pdb file

Issue - State: closed - Opened by seongsangcho-hits almost 3 years ago - 1 comment

#897 - Colordata

Pull Request - State: closed - Opened by fredludlow almost 3 years ago - 2 comments

#895 - Mousewheel Zoom Out focus issue

Issue - State: closed - Opened by sumodhnair19 almost 3 years ago - 5 comments

#893 - Packing using NGL

Issue - State: closed - Opened by awiddess-ccdc almost 3 years ago - 10 comments

#891 - Changing the default tooltip?

Issue - State: closed - Opened by worldresize about 3 years ago - 3 comments

#884 - Transparent background with Chrome 94

Issue - State: closed - Opened by wangenau about 3 years ago - 11 comments

#880 - Add formal charge parsing and writing for PDB files.

Pull Request - State: closed - Opened by fredludlow about 3 years ago - 1 comment

#879 - Load PDB directly from AlphaFold Protein Structure Database

Issue - State: closed - Opened by nvelden about 3 years ago - 1 comment

#878 - how to disable the browser scroll bar when using mouse wheel in ngl viewport

Issue - State: closed - Opened by worldresize about 3 years ago - 3 comments

#872 - Using ngl.js with three.js?

Issue - State: closed - Opened by m-bob over 3 years ago - 16 comments

#865 - Deprecated `update` package

Issue - State: open - Opened by omaraltayyan over 3 years ago - 7 comments
Labels: dependencies

#857 - select chain with blank or undefined chain identifier?

Issue - State: closed - Opened by colin-combe over 3 years ago - 7 comments

#849 - Catch errors in sprintf

Pull Request - State: closed - Opened by fredludlow over 3 years ago

#847 - Include Typescript declarations in published npm package

Pull Request - State: closed - Opened by sto3psl over 3 years ago - 3 comments

#841 - Is there a way to show axes labels?

Issue - State: open - Opened by ixdi almost 4 years ago
Labels: enhancement

#840 - Enables writing partial structures (for PDB format) as requested in #838

Pull Request - State: closed - Opened by fredludlow almost 4 years ago - 1 comment

#833 - Correctly parse atomname of form '0C21', fixes #797

Pull Request - State: closed - Opened by fredludlow almost 4 years ago

#832 - Explicitly check for EXT_frag_depth rather than assuming it's present…

Pull Request - State: closed - Opened by fredludlow almost 4 years ago

#830 - Ensure CSV parameters are not dropped when creating the CsvParser

Pull Request - State: closed - Opened by fredludlow almost 4 years ago

#803 - Fix 802

Pull Request - State: closed - Opened by fredludlow about 4 years ago - 5 comments

#801 - How to load a component and a trajectory

Issue - State: open - Opened by ixdi about 4 years ago - 7 comments

#792 - 693 negative iso transparency

Pull Request - State: closed - Opened by fredludlow about 4 years ago

#781 - Restore test suite

Pull Request - State: closed - Opened by fredludlow over 4 years ago

#775 - Color management in NGL

Issue - State: open - Opened by garyo over 4 years ago - 6 comments

#771 - Update package-lock.json

Pull Request - State: closed - Opened by fredludlow over 4 years ago

#764 - Update three.js to r118

Pull Request - State: closed - Opened by fredludlow over 4 years ago - 13 comments

#755 - Make three.js explicit dependency and don't bundle.

Pull Request - State: closed - Opened by fredludlow over 4 years ago

#752 - Adding OT1 and OT2 to the list of valid backbone Oxygen identifiers.

Pull Request - State: closed - Opened by fredludlow over 4 years ago

#694 - Is it possible to set the stage background color transparent?

Issue - State: closed - Opened by lidaof about 5 years ago - 6 comments

#690 - Web Component Wrapper?

Issue - State: open - Opened by markfortner about 5 years ago - 1 comment

#680 - removeTrajectory showing console.error message

Issue - State: open - Opened by aurel-l over 5 years ago - 6 comments
Labels: bug, question

#678 - Functional TypeScript definitions

Issue - State: closed - Opened by ktamiola over 5 years ago - 1 comment
Labels: question

#674 - Consistent focusScroll behaviour between relative/absolute clipping

Pull Request - State: closed - Opened by fredludlow over 5 years ago - 2 comments

#668 - How to copy a stage?

Issue - State: closed - Opened by hainm over 5 years ago - 6 comments

#665 - Be able to select atoms and move them around

Pull Request - State: open - Opened by lilyminium over 5 years ago - 3 comments

#556 - Dynamically change color of the hovered residue

Issue - State: closed - Opened by xrobin over 6 years ago - 6 comments
Labels: question

#493 - TypeScript Definition File

Issue - State: open - Opened by drew-diamantoukos over 6 years ago - 17 comments
Labels: suggestion

#272 - Distorted cartoon/backbone trace

Issue - State: open - Opened by arose over 7 years ago - 1 comment
Labels: bug, enhancement

#245 - Add defined shapes like an arrow.

Issue - State: closed - Opened by kain88-de almost 8 years ago - 4 comments
Labels: question