nf-core/metaboigniter issues and pull requests

#67 - Add warnings for incomplete identification parameters

Pull Request - State: closed - Opened by axelwalter over 1 year ago - 2 comments

#66 - Merging template updates2

Pull Request - State: closed - Opened by PayamEmami over 1 year ago - 1 comment

#65 - Important! Template update for nf-core/tools v2.10

Pull Request - State: closed - Opened by nf-core-bot over 1 year ago

#64 - Important! Template update for nf-core/tools v2.9

Pull Request - State: closed - Opened by nf-core-bot over 1 year ago - 1 comment

#63 - Important! Template update for nf-core/tools v2.8

Pull Request - State: closed - Opened by nf-core-bot almost 2 years ago - 1 comment

#62 - Important! Template update for nf-core/tools v2.7.2

Pull Request - State: closed - Opened by nf-core-bot about 2 years ago - 1 comment

#61 - Important! Template update for nf-core/tools v2.7.1

Pull Request - State: closed - Opened by nf-core-bot about 2 years ago - 1 comment

#60 - Important! Template update for nf-core/tools v2.6

Pull Request - State: closed - Opened by nf-core-bot over 2 years ago - 1 comment

#59 - Important! Template update for nf-core/tools v2.5.1

Pull Request - State: closed - Opened by nf-core-bot over 2 years ago - 1 comment

#58 - Important! Template update for nf-core/tools v2.5

Pull Request - State: closed - Opened by nf-core-bot over 2 years ago - 1 comment

#57 - Important! Template update for nf-core/tools v2.4

Pull Request - State: closed - Opened by nf-core-bot over 2 years ago - 1 comment

#56 - Bug fixes in library search

Pull Request - State: closed - Opened by PayamEmami almost 3 years ago - 1 comment

#55 - Important! Template update for nf-core/tools v2.3.2

Pull Request - State: closed - Opened by nf-core-bot almost 3 years ago - 1 comment

#54 - Important! Template update for nf-core/tools v2.3.1

Pull Request - State: closed - Opened by nf-core-bot almost 3 years ago - 1 comment

#53 - Important! Template update for nf-core/tools v2.3

Pull Request - State: closed - Opened by nf-core-bot almost 3 years ago - 1 comment

#52 - Library search retention time tolerance is missing

Issue - State: closed - Opened by PayamEmami about 3 years ago - 1 comment
Labels: bug

#51 - Important! Template update for nf-core/tools v2.2

Pull Request - State: closed - Opened by nf-core-bot about 3 years ago - 1 comment

#50 - Process to create library using MSnbase fails on a few files

Issue - State: closed - Opened by maxvincent24 about 3 years ago - 1 comment
Labels: bug

#49 - Fixed empty MS2 handling in createLibrary

Pull Request - State: closed - Opened by PayamEmami over 3 years ago - 1 comment

#48 - Process to create library using MSnbase fails

Issue - State: closed - Opened by maxvincent24 over 3 years ago - 1 comment
Labels: bug

#47 - Bug fixes and updates

Pull Request - State: closed - Opened by PayamEmami over 3 years ago - 1 comment

#46 - library creation fails due to missing parameter

Issue - State: closed - Opened by PayamEmami over 3 years ago - 1 comment

#45 - Important! Template update for nf-core/tools v2.1

Pull Request - State: closed - Opened by nf-core-bot over 3 years ago

#44 - Important! Template update for nf-core/tools v2.0.1

Pull Request - State: closed - Opened by nf-core-bot over 3 years ago - 1 comment

#43 - Important! Template update for nf-core/tools v2.0

Pull Request - State: closed - Opened by KevinMenden over 3 years ago - 1 comment

#42 - Fixed "NULL" string as a default value

Pull Request - State: closed - Opened by PayamEmami over 3 years ago - 1 comment

#41 - Remove default null parameters at schema

Pull Request - State: closed - Opened by jordeu over 3 years ago - 1 comment

#40 - Do not define "NULL" string as a default value at nextflow_schema.json

Issue - State: closed - Opened by jordeu over 3 years ago - 1 comment
Labels: enhancement

#39 - fixed version incompatibility OpenMS

Pull Request - State: closed - Opened by PayamEmami over 3 years ago - 1 comment

#38 - Identification speed improvement

Pull Request - State: closed - Opened by PayamEmami over 3 years ago - 1 comment

#37 - Merging template updates1.4

Pull Request - State: closed - Opened by PayamEmami over 3 years ago - 1 comment

#36 - This is for a minor release 1.0.1 fixing a bug in running on AWS

Pull Request - State: closed - Opened by PayamEmami over 3 years ago - 1 comment

#35 - Important! Template update for nf-core/tools v1.14

Pull Request - State: closed - Opened by nf-core-bot over 3 years ago

#34 - Fixed bugs in AWS execution

Pull Request - State: closed - Opened by PayamEmami almost 4 years ago - 2 comments

#33 - Zenodo on dev too

Pull Request - State: closed - Opened by ewels almost 4 years ago - 1 comment

#32 - Bumped the version to dev

Pull Request - State: closed - Opened by PayamEmami almost 4 years ago - 1 comment

#31 - Added Zenodo DOI

Pull Request - State: closed - Opened by PayamEmami almost 4 years ago - 2 comments

#30 - Fixed output docs

Pull Request - State: closed - Opened by PayamEmami almost 4 years ago - 1 comment

#29 - Review cleanup

Pull Request - State: closed - Opened by ewels almost 4 years ago - 3 comments

#28 - added copyright info to main

Pull Request - State: closed - Opened by PayamEmami almost 4 years ago - 1 comment

#27 - Moved scripts to bin

Pull Request - State: closed - Opened by PayamEmami almost 4 years ago - 3 comments

#26 - Changes in the Dockerfile and clean up

Pull Request - State: closed - Opened by PayamEmami almost 4 years ago - 3 comments

#25 - Pipeline has no release but no UNDER CONSTRUCTION warning

Issue - State: closed - Opened by maxulysse almost 4 years ago
Labels: bug

#24 - Start cleaning up usage.md

Pull Request - State: closed - Opened by ewels almost 4 years ago - 4 comments

#23 - Manually sanitise whitespace

Pull Request - State: closed - Opened by ewels almost 4 years ago - 1 comment

#22 - Add ThermoRawFileParser

Issue - State: closed - Opened by PayamEmami almost 4 years ago - 1 comment
Labels: enhancement

#21 - Removing hashtags

Pull Request - State: closed - Opened by PayamEmami almost 4 years ago - 5 comments

#20 - hide parameters

Pull Request - State: closed - Opened by PayamEmami almost 4 years ago - 2 comments

#19 - Clean up and change docker container

Pull Request - State: closed - Opened by PayamEmami almost 4 years ago - 2 comments

#18 - First release 1.0.0

Pull Request - State: closed - Opened by PayamEmami almost 4 years ago - 4 comments

#17 - fix in the manifest description and the template

Pull Request - State: closed - Opened by PayamEmami almost 4 years ago - 1 comment

#16 - Remove docker build and push

Pull Request - State: closed - Opened by PayamEmami almost 4 years ago - 1 comment

#15 - Merge temp 2

Pull Request - State: closed - Opened by PayamEmami almost 4 years ago - 4 comments

#14 - Fixed linting

Pull Request - State: closed - Opened by PayamEmami almost 4 years ago - 1 comment

#13 - Important! Template update for nf-core/tools v1.13.2

Pull Request - State: closed - Opened by nf-core-bot almost 4 years ago

#12 - Important! Template update for nf-core/tools v1.13.1

Pull Request - State: closed - Opened by nf-core-bot almost 4 years ago - 1 comment

#11 - Important! Template update for nf-core/tools v1.13

Pull Request - State: closed - Opened by nf-core-bot almost 4 years ago - 1 comment

#10 - changes in the documentation and schema

Pull Request - State: closed - Opened by PayamEmami almost 4 years ago - 1 comment
Labels: WIP

#9 - METABOIGNITER: Migrate all docs to JSON parameter schema

Issue - State: closed - Opened by apeltzer almost 4 years ago - 2 comments
Labels: enhancement

#8 - Main cleanup

Pull Request - State: closed - Opened by ewels almost 4 years ago - 2 comments
Labels: WIP

#7 - Add schema parameter validation

Pull Request - State: closed - Opened by ewels almost 4 years ago - 1 comment

#6 - Software in bioconda

Issue - State: closed - Opened by ewels almost 4 years ago - 3 comments
Labels: enhancement

#5 - Config cleanup

Pull Request - State: closed - Opened by ewels almost 4 years ago - 1 comment

#4 - Merging template updates

Pull Request - State: closed - Opened by PayamEmami about 4 years ago - 3 comments

#3 - Pull request for release

Pull Request - State: closed - Opened by PayamEmami about 4 years ago

#2 - Important! Template update for nf-core/tools v1.12.1

Pull Request - State: closed - Opened by nf-core-bot over 4 years ago

#1 - fixed credits

Pull Request - State: closed - Opened by PayamEmami almost 5 years ago

GitHub / nf-core/metaboigniter issues and pull requests