Ecosyste.ms: Issues

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GitHub / nf-core/hgtseq issues and pull requests

#36 - Important! Template update for nf-core/tools v2.10

Pull Request - State: open - Opened by nf-core-bot 10 months ago

#35 - Important! Template update for nf-core/tools v2.9

Pull Request - State: closed - Opened by nf-core-bot about 1 year ago - 1 comment

#34 - Fixed as suggested in review

Pull Request - State: closed - Opened by carpanz about 1 year ago - 1 comment

#33 - Release 1.1.0

Pull Request - State: closed - Opened by carpanz about 1 year ago - 1 comment

#32 - Important! Template update for nf-core/tools v2.8

Pull Request - State: closed - Opened by nf-core-bot about 1 year ago - 1 comment

#31 - Modules update and bug fix

Pull Request - State: closed - Opened by carpanz over 1 year ago - 1 comment

#30 - Added local module to correct samtools view command

Pull Request - State: closed - Opened by carpanz over 1 year ago - 1 comment

#29 - Updating local module "ranalysis"

Issue - State: closed - Opened by carpanz over 1 year ago

#28 - Important! Template update for nf-core/tools v2.7.2

Pull Request - State: closed - Opened by nf-core-bot over 1 year ago - 1 comment

#27 - Important! Template update for nf-core/tools v2.7.1

Pull Request - State: closed - Opened by nf-core-bot over 1 year ago - 1 comment

#26 - Add skip_krona argument

Issue - State: closed - Opened by microbemarsh over 1 year ago
Labels: enhancement

#25 - Bumped new version on dev

Pull Request - State: closed - Opened by carpanz over 1 year ago - 1 comment

#24 - Added last two suggestions

Pull Request - State: closed - Opened by carpanz over 1 year ago - 1 comment

#23 - Last changes to release 1.0.0

Pull Request - State: closed - Opened by carpanz over 1 year ago - 1 comment

#22 - Last changes to release 1.0.0

Pull Request - State: closed - Opened by carpanz over 1 year ago - 1 comment

#21 - Forgot to fix metromap as suggested in release PR review

Pull Request - State: closed - Opened by carpanz over 1 year ago - 2 comments

#20 - added short guideline to genome parameter

Pull Request - State: closed - Opened by carpanz over 1 year ago - 1 comment

#19 - small changes in docs

Pull Request - State: closed - Opened by carpanz over 1 year ago - 1 comment

#18 - Documentation update as required in the release PR

Pull Request - State: closed - Opened by carpanz over 1 year ago - 1 comment

#17 - Removed "seqinfo(hg19sub)" in markdown report

Pull Request - State: closed - Opened by carpanz over 1 year ago - 1 comment

#16 - Release PR 1.0.0

Pull Request - State: closed - Opened by carpanz over 1 year ago - 9 comments

#15 - bumped version number

Pull Request - State: closed - Opened by carpanz over 1 year ago - 1 comment

#14 - Updated Documentation

Pull Request - State: closed - Opened by carpanz over 1 year ago - 1 comment

#13 - Small changes to Documention

Pull Request - State: closed - Opened by carpanz over 1 year ago - 1 comment

#12 - TaxonomyID required param & Bamtools/stats module

Pull Request - State: closed - Opened by carpanz over 1 year ago - 2 comments

#11 - Important! Template update for nf-core/tools v2.6

Pull Request - State: closed - Opened by nf-core-bot almost 2 years ago - 1 comment

#10 - fix sorted bam names

Pull Request - State: closed - Opened by lescai almost 2 years ago - 1 comment

#9 - samtools stats output only one bam file

Issue - State: closed - Opened by lescai almost 2 years ago - 1 comment
Labels: bug

#8 - Conditional genome indexing and non-human genomes

Pull Request - State: closed - Opened by lescai almost 2 years ago - 1 comment

#7 - Usage of CRAM, optimisation of BAM sort/indexing and run checks

Pull Request - State: closed - Opened by lescai almost 2 years ago - 1 comment

#6 - Important! Template update for nf-core/tools v2.5.1

Pull Request - State: closed - Opened by nf-core-bot almost 2 years ago - 1 comment

#5 - Important! Template update for nf-core/tools v2.5

Pull Request - State: closed - Opened by nf-core-bot almost 2 years ago - 1 comment

#4 - Implementing new local modules and subworkflows

Pull Request - State: closed - Opened by carpanz almost 2 years ago - 1 comment

#3 - Important! Template update for nf-core/tools v2.4

Pull Request - State: closed - Opened by nf-core-bot about 2 years ago - 2 comments

#2 - Modules installing to prepare workflow submission

Pull Request - State: closed - Opened by carpanz about 2 years ago - 2 comments

#1 - fix logo

Pull Request - State: closed - Opened by maxulysse about 2 years ago - 1 comment