Ecosyste.ms: Issues

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GitHub / nf-core/demultiplex issues and pull requests

#49 - Important! Template update for nf-core/tools v2.5

Pull Request - State: closed - Opened by nf-core-bot over 2 years ago - 1 comment

#48 - Fix bclconvert module in MultiQC

Issue - State: closed - Opened by matthdsm over 2 years ago - 1 comment
Labels: bug

#47 - Add tests for different demultiplexers

Issue - State: closed - Opened by matthdsm over 2 years ago
Labels: enhancement, help wanted

#46 - Generate MD5 hashes of FastQ files

Issue - State: closed - Opened by berguner over 2 years ago - 4 comments
Labels: enhancement

#45 - medium overhaul

Pull Request - State: closed - Opened by matthdsm over 2 years ago - 4 comments

#44 - Add test for un-archived miseq run

Issue - State: open - Opened by Emiller88 over 2 years ago - 3 comments
Labels: enhancement

#43 - Check Samplesheet expects files to be remote

Issue - State: closed - Opened by Emiller88 over 2 years ago - 2 comments
Labels: bug

#42 - Merge `fc_meta` with `fq_meta` in `generate_fastq_meta` function

Issue - State: closed - Opened by matthdsm almost 3 years ago - 1 comment
Labels: enhancement

#41 - Important! Template update for nf-core/tools v2.4

Pull Request - State: closed - Opened by nf-core-bot almost 3 years ago

#40 - Handle different demultiplexers in the same workflow

Issue - State: open - Opened by Emiller88 almost 3 years ago - 3 comments
Labels: enhancement

#39 - Feature/fastqc

Pull Request - State: closed - Opened by matthdsm almost 3 years ago - 5 comments
Labels: Ready to review

#37 - Upstream BCLConvert changes to nf-core/modules

Issue - State: closed - Opened by Emiller88 almost 3 years ago - 3 comments

#36 - Add Kraken2

Issue - State: open - Opened by Emiller88 almost 3 years ago - 9 comments

#34 - Add fastqc

Issue - State: closed - Opened by Emiller88 almost 3 years ago

#33 - Add Bases2Fastq

Issue - State: closed - Opened by Emiller88 almost 3 years ago - 3 comments

#32 - Customize Multiqc

Issue - State: closed - Opened by Emiller88 almost 3 years ago - 3 comments

#16 - demultiplex: Convert parameter docs to json schema

Issue - State: closed - Opened by apeltzer almost 4 years ago - 1 comment

#15 - Migrate to Universc

Pull Request - State: closed - Opened by TomKellyGenetics almost 4 years ago - 2 comments

#14 - Add UniverSC to support other technologies

Issue - State: open - Opened by TomKellyGenetics about 4 years ago - 16 comments

#3 - Using iGenomes config for CellRanger

Issue - State: closed - Opened by csawye01 almost 5 years ago - 3 comments

#2 - Containerise licence software

Issue - State: closed - Opened by csawye01 almost 5 years ago - 1 comment