Ecosyste.ms: Issues

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GitHub / nextstrain/sacra issues and pull requests

#24 - Rename `master` to `main`

Issue - State: open - Opened by genehack 8 months ago - 1 comment
Labels: enhancement

#23 - Bump actions/checkout from 3 to 4

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago - 1 comment
Labels: dependencies

#22 - Migrate CI to GitHub Actions

Pull Request - State: closed - Opened by victorlin almost 3 years ago - 1 comment

#21 - Sacra runs scale very badly on sequence count.

Issue - State: open - Opened by barneypotter24 over 6 years ago

#20 - Misc tweaks

Pull Request - State: closed - Opened by tsibley over 6 years ago - 8 comments

#19 - use travis CI

Issue - State: closed - Opened by jameshadfield over 6 years ago - 1 comment

#18 - Attribution URL and sequence URL not parsed correctly

Issue - State: open - Opened by trvrb almost 7 years ago

#17 - Attributions not being parsed for FASTA input

Issue - State: open - Opened by trvrb almost 7 years ago

#16 - Mumps accession parsing throwing an error

Issue - State: open - Opened by trvrb almost 7 years ago - 1 comment

#15 - Lassa accession list parsing not working

Issue - State: open - Opened by trvrb almost 7 years ago

#14 - Strains and samples are duplicated when they shouldn't be

Issue - State: open - Opened by trvrb almost 7 years ago - 1 comment

#13 - Null attributes not parsed correctly

Issue - State: open - Opened by trvrb almost 7 years ago - 1 comment

#12 - Document builds

Issue - State: open - Opened by trvrb almost 7 years ago - 6 comments

#11 - Quickly add metadata via command line arguments

Issue - State: closed - Opened by trvrb almost 7 years ago - 2 comments

#10 - Class based

Pull Request - State: closed - Opened by barneypotter24 about 7 years ago

#9 - Dynamic

Pull Request - State: closed - Opened by jameshadfield about 7 years ago - 2 comments

#8 - Cleaning functions

Pull Request - State: closed - Opened by barneypotter24 about 7 years ago - 2 comments

#7 - Genbank API for reference lookup

Pull Request - State: closed - Opened by jameshadfield over 7 years ago

#6 - Schema

Pull Request - State: closed - Opened by trvrb over 7 years ago - 9 comments

#5 - Pick a JSON spec for Sacra output/flora

Pull Request - State: closed - Opened by barneypotter24 over 7 years ago - 1 comment

#4 - Sacra builds should point to current commit.

Issue - State: open - Opened by barneypotter24 over 7 years ago

#3 - Dataset merges are being duplicated.

Issue - State: closed - Opened by barneypotter24 over 7 years ago

#1 - Dataset.dataset should be a dict, not a list of dicts.

Issue - State: closed - Opened by barneypotter24 over 7 years ago - 1 comment