Ecosyste.ms: Issues

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GitHub / nextflow-io/nf-validation issues and pull requests

#49 - "exists" should only check if a path exists if the value is provided

Issue - State: closed - Opened by mirpedrol over 1 year ago
Labels: bug

#48 - Unexpected error when a parameter isn't in the schema

Issue - State: closed - Opened by nvnieuwk over 1 year ago - 6 comments
Labels: bug

#48 - Unexpected error when a parameter isn't in the schema

Issue - State: closed - Opened by nvnieuwk over 1 year ago - 6 comments
Labels: bug

#47 - ImmutableMap clashes with the `-resume` flag

Issue - State: closed - Opened by nvnieuwk over 1 year ago - 2 comments
Labels: bug

#47 - ImmutableMap clashes with the `-resume` flag

Issue - State: closed - Opened by nvnieuwk over 1 year ago - 2 comments
Labels: bug

#46 - ImmutableMap becomes a LinkedHashMap after passing through a process

Issue - State: closed - Opened by nvnieuwk over 1 year ago - 2 comments

#46 - ImmutableMap becomes a LinkedHashMap after passing through a process

Issue - State: closed - Opened by nvnieuwk over 1 year ago - 2 comments

#45 - update all code to v0.2.1

Pull Request - State: closed - Opened by nvnieuwk over 1 year ago

#45 - update all code to v0.2.1

Pull Request - State: closed - Opened by nvnieuwk over 1 year ago

#44 - change priority to fix the immutable meta bug

Pull Request - State: closed - Opened by nvnieuwk over 1 year ago

#44 - change priority to fix the immutable meta bug

Pull Request - State: closed - Opened by nvnieuwk over 1 year ago

#43 - update version in manifest to 0.2.0

Pull Request - State: closed - Opened by nvnieuwk over 1 year ago

#41 - More work on the docs

Pull Request - State: closed - Opened by ewels over 1 year ago - 2 comments

#41 - More work on the docs

Pull Request - State: closed - Opened by ewels over 1 year ago - 2 comments

#40 - New entry exists

Pull Request - State: closed - Opened by mirpedrol over 1 year ago - 4 comments

#40 - New entry exists

Pull Request - State: closed - Opened by mirpedrol over 1 year ago - 4 comments

#39 - allow a custom errorMessage from the JSONSchema

Pull Request - State: closed - Opened by mirpedrol over 1 year ago - 3 comments

#39 - allow a custom errorMessage from the JSONSchema

Pull Request - State: closed - Opened by mirpedrol over 1 year ago - 3 comments

#38 - Add a new `exists` key

Issue - State: closed - Opened by nvnieuwk over 1 year ago

#38 - Add a new `exists` key

Issue - State: closed - Opened by nvnieuwk over 1 year ago

#37 - small changes to docs

Pull Request - State: closed - Opened by mirpedrol over 1 year ago

#37 - small changes to docs

Pull Request - State: closed - Opened by mirpedrol over 1 year ago

#36 - Small fixes to the docs

Pull Request - State: closed - Opened by nvnieuwk over 1 year ago - 3 comments

#36 - Small fixes to the docs

Pull Request - State: closed - Opened by nvnieuwk over 1 year ago - 3 comments

#35 - Docs rewrite

Pull Request - State: closed - Opened by ewels over 1 year ago - 2 comments

#35 - Docs rewrite

Pull Request - State: closed - Opened by ewels over 1 year ago - 2 comments

#33 - refactor schema_ignore_params to validationSchemaIgnoreParams

Pull Request - State: closed - Opened by mirpedrol over 1 year ago

#33 - refactor schema_ignore_params to validationSchemaIgnoreParams

Pull Request - State: closed - Opened by mirpedrol over 1 year ago

#32 - Immutable meta maps

Pull Request - State: closed - Opened by nvnieuwk over 1 year ago - 7 comments

#31 - initialise expected params

Pull Request - State: closed - Opened by mirpedrol over 1 year ago

#31 - initialise expected params

Pull Request - State: closed - Opened by mirpedrol over 1 year ago

#30 - add mkdocs pages

Pull Request - State: closed - Opened by mashehu over 1 year ago

#30 - add mkdocs pages

Pull Request - State: closed - Opened by mashehu over 1 year ago

#29 - Make the meta map immutable

Issue - State: closed - Opened by nvnieuwk over 1 year ago - 11 comments

#29 - Make the meta map immutable

Issue - State: closed - Opened by nvnieuwk over 1 year ago - 11 comments

#28 - Fixed the no meta bug

Pull Request - State: closed - Opened by nvnieuwk over 1 year ago

#28 - Fixed the no meta bug

Pull Request - State: closed - Opened by nvnieuwk over 1 year ago

#27 - Add more formats for file types

Pull Request - State: closed - Opened by nvnieuwk over 1 year ago

#27 - Add more formats for file types

Pull Request - State: closed - Opened by nvnieuwk over 1 year ago

#26 - Example config and/or make sure all plugin params are treated as expected

Issue - State: closed - Opened by tfenne over 1 year ago - 2 comments

#26 - Example config and/or make sure all plugin params are treated as expected

Issue - State: closed - Opened by tfenne over 1 year ago - 2 comments

#25 - Validate a samplesheet automatically from a schema file

Pull Request - State: closed - Opened by mirpedrol over 1 year ago - 16 comments

#25 - Validate a samplesheet automatically from a schema file

Pull Request - State: closed - Opened by mirpedrol over 1 year ago - 16 comments

#24 - fix include in README

Pull Request - State: closed - Opened by nvnieuwk over 1 year ago

#24 - fix include in README

Pull Request - State: closed - Opened by nvnieuwk over 1 year ago

#23 - Example in the QuickStart section has a syntax error

Issue - State: closed - Opened by tfenne over 1 year ago - 2 comments

#23 - Example in the QuickStart section has a syntax error

Issue - State: closed - Opened by tfenne over 1 year ago - 2 comments

#22 - Meta issue

Issue - State: closed - Opened by nvnieuwk over 1 year ago

#22 - Meta issue

Issue - State: closed - Opened by nvnieuwk over 1 year ago

#21 - Add missing closing quotes

Pull Request - State: closed - Opened by ewels over 1 year ago

#21 - Add missing closing quotes

Pull Request - State: closed - Opened by ewels over 1 year ago

#19 - Validate a file included in the params JSON Schema

Issue - State: closed - Opened by mirpedrol over 1 year ago

#19 - Validate a file included in the params JSON Schema

Issue - State: closed - Opened by mirpedrol over 1 year ago

#18 - Add more file options as formats

Issue - State: closed - Opened by nvnieuwk over 1 year ago

#18 - Add more file options as formats

Issue - State: closed - Opened by nvnieuwk over 1 year ago

#17 - update README

Pull Request - State: closed - Opened by mirpedrol over 1 year ago

#17 - update README

Pull Request - State: closed - Opened by mirpedrol over 1 year ago

#16 - Add some samplesheet postprocess examples

Pull Request - State: closed - Opened by nvnieuwk over 1 year ago - 2 comments

#16 - Add some samplesheet postprocess examples

Pull Request - State: closed - Opened by nvnieuwk over 1 year ago - 2 comments

#15 - Add validation with nested schemas

Pull Request - State: closed - Opened by mirpedrol over 1 year ago - 2 comments

#15 - Add validation with nested schemas

Pull Request - State: closed - Opened by mirpedrol over 1 year ago - 2 comments

#14 - Confused

Issue - State: closed - Opened by fabianegli over 1 year ago

#14 - Confused

Issue - State: closed - Opened by fabianegli over 1 year ago

#13 - don't check for version param

Pull Request - State: closed - Opened by mirpedrol over 1 year ago - 2 comments

#12 - Validate any parameter file with an associated schema

Pull Request - State: closed - Opened by mirpedrol almost 2 years ago - 2 comments

#11 - modify validation parameters to camelCase

Pull Request - State: closed - Opened by mirpedrol almost 2 years ago

#10 - Add samplesheet validation and conversion

Pull Request - State: closed - Opened by nvnieuwk almost 2 years ago - 18 comments

#9 - Use camelCase for validation parameters

Issue - State: closed - Opened by pditommaso almost 2 years ago - 2 comments

#8 - add documentation

Pull Request - State: closed - Opened by mirpedrol almost 2 years ago

#7 - Pass a parameter name to --help to print the complete information

Pull Request - State: closed - Opened by mirpedrol almost 2 years ago - 5 comments

#6 - print argument enums in help message

Pull Request - State: closed - Opened by mirpedrol almost 2 years ago - 1 comment

#5 - add nf-core NfcoreSchema.groovy updates to SchemaValidator.groovy

Pull Request - State: closed - Opened by mirpedrol over 2 years ago - 28 comments

#4 - Is this an official plugin, yet?

Issue - State: closed - Opened by mmatthews06 almost 3 years ago - 2 comments

#3 - Add failing test

Pull Request - State: closed - Opened by pditommaso over 3 years ago - 4 comments

#2 - Added more tests

Pull Request - State: closed - Opened by KevinMenden over 3 years ago - 2 comments

#1 - Parameter validation interface

Issue - State: closed - Opened by pditommaso over 3 years ago - 16 comments