Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / neuronsimulator/nrn issues and pull requests

#2980 - CMake: remove --depth for submodule --init as it's not supported

Pull Request - State: closed - Opened by pramodk 4 months ago - 11 comments

#2979 - ParallelContext: hoc_ac_ encodes global id of submitted process. (#2965)

Pull Request - State: closed - Opened by nrnhines 4 months ago - 2 comments

#2978 - ParallelContext: hoc_ac_ encodes global id of submitted process. (#2965)

Pull Request - State: closed - Opened by nrnhines 4 months ago - 1 comment

#2977 - Hines/8.2 fix bbs hocac

Pull Request - State: closed - Opened by nrnhines 4 months ago - 1 comment

#2976 - CONSTANT variables are not constant.

Issue - State: closed - Opened by 1uc 4 months ago - 3 comments

#2975 - fix matplotlib and plotly plotshape in Windows

Pull Request - State: closed - Opened by ceciliaromaro 4 months ago

#2974 - Move NMODL integration to top level CMake.

Pull Request - State: open - Opened by matz-e 4 months ago - 11 comments

#2973 - Wrong logical connection points for cell imported from neurolucida file

Issue - State: open - Opened by TorgeW 4 months ago - 6 comments
Labels: bug

#2972 - Always install external headers.

Pull Request - State: closed - Opened by matz-e 4 months ago - 4 comments

#2971 - Add documentation about using Intel Vtune with NEURON

Pull Request - State: closed - Opened by pramodk 4 months ago - 8 comments

#2970 - NEURON + NMODL build failure: can't find Eigen.

Issue - State: closed - Opened by 1uc 4 months ago - 1 comment
Labels: bug

#2969 - ModelDB CI broke.

Issue - State: closed - Opened by 1uc 4 months ago
Labels: bug, CI

#2968 - Factorize code of getting regex from hoc arguments

Pull Request - State: closed - Opened by alkino 4 months ago - 4 comments

#2967 - Improve comments near nrn_promote.

Pull Request - State: closed - Opened by 1uc 4 months ago - 6 comments

#2966 - Force inlining for sparse_thread solver routine to fix performance regression

Pull Request - State: closed - Opened by pramodk 4 months ago - 8 comments

#2965 - ParallelContext: hoc_ac_ encodes global id of submitted process.

Pull Request - State: closed - Opened by nrnhines 4 months ago - 4 comments

#2964 - Document `numpy<2` in install FAQ.

Pull Request - State: closed - Opened by 1uc 4 months ago - 7 comments

#2963 - Python3.12 compatible with release/8.2 windows installer

Pull Request - State: closed - Opened by nrnhines 4 months ago - 3 comments

#2962 - Fix bug with lfp reports in coreneuron direct mode

Pull Request - State: closed - Opened by jorblancoa 5 months ago - 6 comments

#2961 - Remove IPO for nanobind target

Pull Request - State: closed - Opened by pramodk 5 months ago - 4 comments

#2960 - Remove Perl dependency.

Pull Request - State: closed - Opened by matz-e 5 months ago - 8 comments

#2959 - Improved Py bindings w Nanobind: Section/Segment

Pull Request - State: closed - Opened by ferdonline 5 months ago - 33 comments

#2958 - Build failure for Neuron 9.0a

Issue - State: closed - Opened by cstricker 5 months ago - 8 comments
Labels: bug

#2957 - Bump numpy from 1.17.5 to 1.22.0 in /packaging/python

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 4 comments
Labels: dependencies

#2956 - beginning of nb

Pull Request - State: open - Opened by alkino 5 months ago - 4 comments

#2955 - Install ONE requirements file with all requirements.

Pull Request - State: closed - Opened by matz-e 5 months ago - 10 comments

#2954 - Improve Py Segments handling with nanobind

Pull Request - State: closed - Opened by ferdonline 5 months ago - 8 comments

#2953 - Remove NMODL include directory dependency.

Pull Request - State: closed - Opened by matz-e 5 months ago - 20 comments

#2952 - Clean up CMake after BlueBrain/nmodl#1305

Pull Request - State: closed - Opened by matz-e 5 months ago - 4 comments

#2951 - Hines/thread padding

Pull Request - State: open - Opened by nrnhines 5 months ago - 13 comments

#2950 - RxD calls to species.nodes is excessively slow

Issue - State: open - Opened by Hjorthmedh 5 months ago - 6 comments
Labels: bug, rxd

#2949 - undefined reference to ‘memcpy@GLIBC_2.1’ compiling error

Issue - State: open - Opened by nrnhines 5 months ago - 15 comments

#2948 - Improve header hygiene for `cabcode.h`.

Pull Request - State: closed - Opened by mgeplf 5 months ago - 17 comments

#2946 - Fragments from 2dd4518 windows 11 fix for nrniv -python (#2255)

Pull Request - State: closed - Opened by nrnhines 5 months ago - 6 comments

#2945 - Remove warning for struct/class

Pull Request - State: closed - Opened by alkino 5 months ago - 4 comments

#2944 - Set MACOSX_DEPLOYMENT_TARGET in CI to avoid extra warnings

Pull Request - State: open - Opened by pramodk 5 months ago - 4 comments

#2943 - Reduce duplication for dparam.

Pull Request - State: closed - Opened by 1uc 5 months ago - 4 comments

#2942 - Fix const incorrectness.

Pull Request - State: closed - Opened by 1uc 5 months ago - 4 comments

#2941 - Replace `ISARRAY` with a function.

Pull Request - State: closed - Opened by 1uc 5 months ago - 4 comments

#2940 - Distinguish `OpaquePointer`s from `double*`.

Pull Request - State: closed - Opened by 1uc 5 months ago - 16 comments

#2939 - Sporadic Failure of RXD.

Issue - State: open - Opened by 1uc 5 months ago - 5 comments
Labels: bug, CI

#2938 - Use `Py_RETURN_NONE` macro when return `Py_None`

Pull Request - State: closed - Opened by mgeplf 5 months ago - 4 comments

#2937 - Header Hygiene

Pull Request - State: closed - Opened by mgeplf 5 months ago - 4 comments

#2936 - standardization of d_lambda

Pull Request - State: open - Opened by ramcdougal 5 months ago - 4 comments

#2935 - Documentation website is down

Issue - State: closed - Opened by kmilo9999 5 months ago - 3 comments
Labels: bug

#2934 - Cherry-picks for 8.2.6

Pull Request - State: closed - Opened by heerener 5 months ago - 13 comments

#2933 - DRY up NPySecObj_* accessors

Pull Request - State: closed - Opened by mgeplf 5 months ago - 6 comments

#2931 - Bump version

Pull Request - State: closed - Opened by JCGoran 5 months ago - 2 comments

#2930 - NEURON 8.2.6 patch release

Issue - State: closed - Opened by heerener 5 months ago - 8 comments
Labels: release

#2929 - Simplify `at_time`

Pull Request - State: closed - Opened by JCGoran 5 months ago - 4 comments

#2928 - Stop deploying doc on GH pages.

Pull Request - State: closed - Opened by alkino 5 months ago - 3 comments

#2927 - [WIP] Change MacOS deployment target

Pull Request - State: closed - Opened by JCGoran 5 months ago - 1 comment

#2926 - nrnexec return boolean instead of 0 / 1

Pull Request - State: closed - Opened by alkino 5 months ago - 10 comments

#2925 - Remove CNRN mechanism layout.

Pull Request - State: open - Opened by 1uc 5 months ago - 3 comments

#2924 - Remove CNRN mechanism layout.

Pull Request - State: closed - Opened by 1uc 5 months ago - 3 comments

#2923 - Convert C++ exception to Python exceptions.

Pull Request - State: closed - Opened by 1uc 5 months ago - 6 comments

#2922 - Consolidate NMODL docs and improve their discoverability

Pull Request - State: closed - Opened by kbvw 5 months ago - 15 comments

#2921 - DRY up `NPySecObj_*` accessors.

Issue - State: closed - Opened by 1uc 5 months ago - 1 comment

#2920 - Backport numpy pinning to 8.2

Pull Request - State: closed - Opened by JCGoran 5 months ago - 4 comments

#2919 - Pin numpy in `test_wheels.sh`

Pull Request - State: closed - Opened by JCGoran 5 months ago - 3 comments

#2918 - Put one declaration per line for _ba%d

Pull Request - State: closed - Opened by alkino 5 months ago - 3 comments

#2917 - VClamp and SEClamp documentation needs more info about parameters

Issue - State: open - Opened by ramcdougal 5 months ago
Labels: documentation

#2916 - Pin numpy max version to <2

Pull Request - State: closed - Opened by JCGoran 5 months ago - 8 comments

#2915 - Improve comments.

Pull Request - State: closed - Opened by 1uc 5 months ago - 4 comments

#2914 - Optimize code generated for `diam` and `area`.

Pull Request - State: closed - Opened by 1uc 5 months ago - 18 comments

#2913 - Performance issue for `diam`.

Issue - State: closed - Opened by 1uc 5 months ago

#2912 - Are top-LOCALs that are PARAMETERs valid?

Issue - State: closed - Opened by 1uc 5 months ago - 4 comments

#2911 - Document `f/b_flux`

Issue - State: closed - Opened by JCGoran 5 months ago - 1 comment
Labels: enhancement

#2910 - [WIP] Make RX3D installable via CMake

Pull Request - State: open - Opened by JCGoran 5 months ago - 2 comments

#2909 - Use a shortcut for globals to reduce time

Pull Request - State: closed - Opened by alkino 5 months ago - 15 comments

#2908 - Thread-safe GLOBALs in NET_RECEIVE.

Issue - State: open - Opened by 1uc 5 months ago

#2907 - Build dependency on `src/nrnoc/init.cpp`.

Issue - State: open - Opened by 1uc 5 months ago
Labels: bug

#2906 - Remove `vectorize`.

Pull Request - State: open - Opened by 1uc 5 months ago - 8 comments

#2905 - NEURON MPI is not enabled in Github Linux runner

Issue - State: open - Opened by kmilo9999 5 months ago - 3 comments
Labels: bug, CI

#2904 - more senselab removal and fixes

Pull Request - State: closed - Opened by ramcdougal 5 months ago - 4 comments
Labels: documentation

#2903 - Add fmt library

Pull Request - State: closed - Opened by alkino 5 months ago - 15 comments

#2902 - replace senselab and modeldb.yale links with new site

Pull Request - State: closed - Opened by ramcdougal 5 months ago - 3 comments

#2901 - Helvetica no more mandatory.

Pull Request - State: open - Opened by alkino 5 months ago - 3 comments

#2900 - Update `nmodl` submodule.

Pull Request - State: closed - Opened by 1uc 6 months ago - 10 comments

#2898 - Run CI.

Pull Request - State: closed - Opened by 1uc 6 months ago - 6 comments

#2895 - Remove CNRN mechanism layout.

Pull Request - State: closed - Opened by 1uc 6 months ago - 15 comments

#2893 - Add RxDExceptions to invalid arguments in _ensure_arithmeticed

Pull Request - State: open - Opened by rgourdine 6 months ago - 19 comments

#2891 - Accept same argument for nrnivmod-core and nrnivmodl

Pull Request - State: open - Opened by alkino 6 months ago - 3 comments

#2889 - WIP: Flense AoS layout from coreneuron

Pull Request - State: closed - Opened by mgeplf 6 months ago - 9 comments

#2886 - Performance regression with master / 9.0 when GLOBAL variables are used a MOD file

Issue - State: closed - Opened by pramodk 6 months ago - 1 comment
Labels: bug

#2885 - Update docs for TABLE statement

Pull Request - State: closed - Opened by JCGoran 6 months ago - 9 comments

#2883 - Remove `hoc2dec.sh`.

Pull Request - State: closed - Opened by 1uc 6 months ago - 8 comments

#2879 - Run CI.

Pull Request - State: closed - Opened by 1uc 6 months ago - 4 comments

#2877 - Remove NEOSIM related code

Pull Request - State: closed - Opened by mgeplf 6 months ago - 5 comments

#2871 - Enable spike replays using external files for coreneuron in memory mode

Pull Request - State: closed - Opened by WeinaJi 7 months ago - 9 comments

#2862 - Fix h.Vector[0] : TypeError: type 'hoc.Vector' is not subscriptable

Pull Request - State: closed - Opened by nrnhines 7 months ago - 22 comments

#2860 - NEURON v9 python syntax does not allow use of template instance name

Issue - State: closed - Opened by nrnhines 7 months ago - 14 comments

#2858 - Optional first arg for Vector.record can be an ARTIFICIAL_CELL

Pull Request - State: open - Opened by nrnhines 7 months ago - 7 comments

#2842 - Multiprocessing behavior differs across Ubuntu/MacOS

Issue - State: open - Opened by anilbey 7 months ago - 10 comments
Labels: bug, documentation

#2838 - Try `nmodl ^[email protected]`.

Pull Request - State: closed - Opened by 1uc 7 months ago - 3 comments

#2835 - Replace `realpath` in CI scripts

Pull Request - State: open - Opened by JCGoran 7 months ago - 6 comments