Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / neuromodulation/py_neuromodulation issues and pull requests

#351 - py-neuro GUI development

Issue - State: open - Opened by timonmerk 17 days ago - 1 comment

#350 - Nm database

Pull Request - State: open - Opened by SamedVossberg 19 days ago

#349 - Remove features dictionary as input to calc_feature

Pull Request - State: closed - Opened by toni-neurosc 22 days ago - 2 comments

#348 - Re-structure project folder hierarchy

Issue - State: open - Opened by toni-neurosc 23 days ago - 1 comment

#347 - Replace assertions with errors

Issue - State: open - Opened by toni-neurosc 25 days ago - 1 comment

#346 - MNE connectivity 2x speed-up

Pull Request - State: closed - Opened by toni-neurosc 25 days ago - 2 comments

#345 - Database setup

Issue - State: open - Opened by timonmerk 26 days ago

#344 - Performance regression in MNE connectivity

Issue - State: closed - Opened by toni-neurosc 27 days ago - 1 comment

#343 - Fix docstrings

Pull Request - State: closed - Opened by timonmerk 27 days ago - 5 comments

#342 - Create a GUI mockup

Issue - State: open - Opened by toni-neurosc 28 days ago

#341 - Add compatibility with Numpy 1.26 and 2.0

Pull Request - State: closed - Opened by toni-neurosc 28 days ago

#340 - Optimize Hjorth and LineLength calculation

Pull Request - State: closed - Opened by toni-neurosc 28 days ago - 2 comments

#339 - MNEFilter with fftconvolve

Pull Request - State: closed - Opened by toni-neurosc 28 days ago - 1 comment

#338 - Create a global dataclass to hold set-up specific settings

Issue - State: open - Opened by toni-neurosc 28 days ago - 3 comments

#337 - Timing lsl

Pull Request - State: closed - Opened by SamedVossberg 28 days ago - 1 comment

#336 - Fix MNE connectivity feature calculation

Issue - State: closed - Opened by toni-neurosc about 1 month ago - 2 comments

#335 - Replace fooof with specparam

Issue - State: open - Opened by toni-neurosc about 1 month ago - 2 comments

#334 - Generate results directly from feature_dict instead of pd.Series

Pull Request - State: closed - Opened by toni-neurosc about 1 month ago - 2 comments

#333 - Fix timestamp for LSL and offline stream data

Issue - State: closed - Opened by timonmerk about 1 month ago - 1 comment

#332 - Allow users to add custom features to processing pipeline

Issue - State: closed - Opened by toni-neurosc about 1 month ago - 1 comment

#331 - Update and complete docstrings

Issue - State: open - Opened by toni-neurosc about 1 month ago - 2 comments

#330 - nm_train live training class

Pull Request - State: closed - Opened by SamedVossberg about 1 month ago - 2 comments

#329 - Pydantic validation settings

Pull Request - State: closed - Opened by timonmerk about 1 month ago - 14 comments

#328 - Move LSL lib files inside module directory, increase OS support, fix docs build

Pull Request - State: closed - Opened by toni-neurosc about 1 month ago - 3 comments

#327 - Failing documentation build on readthedocs

Issue - State: closed - Opened by timonmerk about 1 month ago - 1 comment

#326 - Refactor lsl stream

Pull Request - State: closed - Opened by SamedVossberg about 2 months ago - 11 comments

#325 - Minor changes on top of mne_lsl merge

Pull Request - State: closed - Opened by toni-neurosc 2 months ago - 2 comments

#324 - Refactor testing module

Issue - State: closed - Opened by timonmerk 2 months ago - 4 comments

#323 - Add mne lsl feature

Pull Request - State: closed - Opened by SamedVossberg 2 months ago

#320 - Test Polars compatibility and performance

Issue - State: open - Opened by toni-neurosc 2 months ago - 4 comments

#319 - Import all modules as lazily as possible

Pull Request - State: closed - Opened by toni-neurosc 2 months ago - 2 comments

#318 - Merge main into LSL branch

Pull Request - State: closed - Opened by toni-neurosc 3 months ago - 2 comments

#317 - Add NMPreprocessor protocol and Preprocessors class

Pull Request - State: closed - Opened by toni-neurosc 3 months ago - 1 comment

#315 - Create a Stream Metadata class

Issue - State: open - Opened by toni-neurosc 3 months ago - 2 comments

#314 - Settle for an acronym to use in the codebase (PN, NM, ...)

Issue - State: closed - Opened by toni-neurosc 3 months ago - 4 comments

#312 - Make test calls of preprocessors

Issue - State: closed - Opened by timonmerk 3 months ago

#311 - Improve Github actions testing workflow

Pull Request - State: closed - Opened by toni-neurosc 3 months ago - 2 comments

#310 - Use Rye to install dependencies during automated tests

Issue - State: closed - Opened by toni-neurosc 3 months ago - 1 comment

#309 - Change formatter from Black to Ruff

Issue - State: closed - Opened by toni-neurosc 3 months ago - 3 comments

#308 - Move tox.ini contents to pyproject.toml

Pull Request - State: closed - Opened by toni-neurosc 3 months ago - 2 comments

#307 - Turn Feature abstract class into a Protocol and lazy load feature modules

Pull Request - State: closed - Opened by toni-neurosc 3 months ago - 2 comments

#306 - Add logging class

Pull Request - State: closed - Opened by toni-neurosc 3 months ago - 3 comments

#305 - Fix type hints, clean imports, and other errors reported by static analysis

Pull Request - State: closed - Opened by toni-neurosc 3 months ago - 6 comments

#304 - Handle input in multiple data formats

Issue - State: closed - Opened by toni-neurosc 3 months ago - 2 comments

#303 - Fix type hints project-wide

Issue - State: closed - Opened by toni-neurosc 3 months ago - 3 comments

#302 - Create a "Settings" class to support Pydantic validation

Issue - State: closed - Opened by toni-neurosc 3 months ago - 1 comment

#301 - Fix handling of dataframe input, issue #300

Pull Request - State: closed - Opened by toni-neurosc 3 months ago - 1 comment

#300 - Add support for pandas DataFrames as input data

Issue - State: closed - Opened by SamedVossberg 3 months ago - 2 comments

#299 - Add R-Map computer without Lead-Mapper

Pull Request - State: closed - Opened by timonmerk 4 months ago

#298 - Logging

Pull Request - State: closed - Opened by timonmerk 4 months ago

#297 - Add Installation Instruction given rye

Issue - State: closed - Opened by timonmerk 5 months ago

#295 - Replace print statements with logging

Issue - State: closed - Opened by timonmerk 5 months ago

#294 - Add preprocessing filter

Pull Request - State: closed - Opened by timonmerk 5 months ago

#293 - Add option for bandpass/stop filter as preprocessing method

Issue - State: closed - Opened by timonmerk 5 months ago
Labels: enhancement

#292 - Add circadian or multidiem rythm features

Issue - State: closed - Opened by timonmerk 6 months ago - 1 comment
Labels: enhancement

#291 - Add percentile normalization

Issue - State: open - Opened by timonmerk 6 months ago - 1 comment
Labels: enhancement

#290 - Parallel processing pr

Pull Request - State: closed - Opened by timonmerk 6 months ago - 2 comments

#289 - Check for setting keys in the stream.settings which are not available

Issue - State: closed - Opened by timonmerk 6 months ago - 4 comments

#288 - Sharpwaves performance fixes

Pull Request - State: closed - Opened by toni-neurosc 6 months ago - 6 comments

#287 - Fix broken link

Pull Request - State: closed - Opened by toni-neurosc 6 months ago

#286 - Bursts feature performance improvement

Pull Request - State: closed - Opened by toni-neurosc 6 months ago - 1 comment

#285 - Avoid use of Numpy nan statistics if possible

Pull Request - State: closed - Opened by toni-neurosc 6 months ago - 2 comments

#284 - Fix add targets

Pull Request - State: closed - Opened by timonmerk 6 months ago

#283 - Bug when adding labels to features which unenven sampling rates

Issue - State: closed - Opened by timonmerk 6 months ago
Labels: bug

#282 - Add PyPARRM as option to remove stim artifact?

Issue - State: closed - Opened by timonmerk 6 months ago - 1 comment

#281 - Add parallel batch processing

Pull Request - State: closed - Opened by toni-neurosc 6 months ago - 4 comments

#280 - Save CSVs with PyArrow

Pull Request - State: closed - Opened by toni-neurosc 6 months ago - 3 comments

#279 - Write "offline" artifact annotation

Issue - State: closed - Opened by timonmerk 6 months ago

#278 - Replace Datastream with mnelsl Datastream

Issue - State: closed - Opened by timonmerk 6 months ago - 1 comment

#277 - Add option to save bispectra in feature output data frame

Issue - State: closed - Opened by timonmerk 6 months ago - 1 comment

#276 - add option to store psd for fft, stft and welch method

Pull Request - State: closed - Opened by timonmerk 7 months ago

#275 - rename py_neuromodulation consistent to nm

Pull Request - State: closed - Opened by timonmerk 7 months ago - 1 comment

#274 - fix ch_used data selection

Pull Request - State: closed - Opened by timonmerk 7 months ago

#273 - Standardize use of nm or pn in import statements

Issue - State: closed - Opened by timonmerk 7 months ago
Labels: documentation

#272 - Bug with nm_channels "used" keyword

Issue - State: closed - Opened by timonmerk 7 months ago - 1 comment
Labels: bug

#271 - Add artifact rejection module without normalization

Issue - State: open - Opened by timonmerk 7 months ago - 2 comments
Labels: enhancement

#270 - Add plotter raw

Pull Request - State: closed - Opened by timonmerk 7 months ago

#269 - add Welch method

Pull Request - State: closed - Opened by timonmerk 7 months ago

#268 - Changing the settings.json

Issue - State: closed - Opened by timonmerk 8 months ago

#267 - Bispectra

Pull Request - State: closed - Opened by timonmerk 10 months ago

#266 - Fix timing

Pull Request - State: closed - Opened by timonmerk 10 months ago

#265 - Normalizations starting with first sample create huge outlier

Issue - State: closed - Opened by timonmerk 10 months ago - 1 comment
Labels: bug

#264 - Adding timepoints instead of fixed sampling frequency as input

Issue - State: closed - Opened by timonmerk 10 months ago
Labels: enhancement

#263 - Potential new feautres

Issue - State: closed - Opened by timonmerk 10 months ago - 1 comment
Labels: enhancement

#262 - NaN values currently don't result in NaN features

Issue - State: closed - Opened by timonmerk 10 months ago
Labels: bug

#261 - Enable changes in settings and nm_channels after initialization

Issue - State: closed - Opened by timonmerk 10 months ago
Labels: enhancement

#260 - Experimental

Pull Request - State: closed - Opened by timonmerk 11 months ago

#259 - Default re-referencing will fail if there is a single channel only

Issue - State: closed - Opened by timonmerk 11 months ago
Labels: bug

#258 - How to setup the path for the examples?

Issue - State: closed - Opened by timonmerk 11 months ago - 1 comment

#257 - rewrite documentation for readthedocs

Pull Request - State: closed - Opened by timonmerk 11 months ago

#256 - Updated docs & Added multi-channel mode

Pull Request - State: closed - Opened by GBouwman 11 months ago

#255 - Add jupyter notebook as dependency to environment.yml

Issue - State: closed - Opened by timonmerk 11 months ago - 1 comment

#254 - Rewrite documentation with readthedocs

Issue - State: closed - Opened by timonmerk 11 months ago

#252 - DOC: Add example to add individual feature class

Issue - State: closed - Opened by timonmerk 11 months ago
Labels: documentation

#251 - Make test for versioning

Issue - State: closed - Opened by timonmerk 11 months ago - 1 comment

#250 - Fix Realtime Setup

Issue - State: closed - Opened by timonmerk over 1 year ago