netneurolab/netneurotools issues and pull requests

#149 - [ENH] add sw_nest, sw_nest_perm_ols, and sw_spice functions

Pull Request - State: open - Opened by liuzhenqi77 22 days ago

#148 - netneurotools.modularity.get_modularity_z Throws an error.

Issue - State: open - Opened by dzodkin33 about 2 months ago

#147 - fetch_cammoun2012 cannot be used

Issue - State: closed - Opened by Bingjie-Xu 2 months ago

#146 - Various improvements again

Pull Request - State: closed - Opened by liuzhenqi77 3 months ago

#145 - [MNT] Test Github Actions trigger

Pull Request - State: closed - Opened by liuzhenqi77 3 months ago - 1 comment

#144 - [ENH] Various improvements

Pull Request - State: closed - Opened by liuzhenqi77 3 months ago

#143 - [ENH] update GitHub Actions workflows

Pull Request - State: closed - Opened by liuzhenqi77 3 months ago

#142 - [MNT] Update pyproject.toml

Pull Request - State: closed - Opened by liuzhenqi77 3 months ago

#141 - Change of the postion of folder resources

Issue - State: closed - Opened by zihuaihuai 3 months ago - 1 comment

#140 - Breaking changes: major reorganization of netneurotools

Pull Request - State: closed - Opened by liuzhenqi77 9 months ago - 2 comments

#139 - 🚨 Important Update: Breaking Changes to netneurotools 🚨

Issue - State: closed - Opened by liuzhenqi77 9 months ago - 1 comment

#138 - Some ideas for improving the library

Issue - State: open - Opened by kuffmode 11 months ago

#137 - cluster.find_consensus returns labels that do not exist in the input array

Issue - State: open - Opened by athantas95 11 months ago - 1 comment

#136 - [FIX] fixing the asymmetric case in search_information

Pull Request - State: closed - Opened by fmilisav 12 months ago

#135 - [ENH] added user-specified bin arguments for struct_consensus

Pull Request - State: closed - Opened by fmilisav 12 months ago

#134 - [ENH] Strength nulls

Pull Request - State: closed - Opened by fmilisav 12 months ago

#133 - [ENH] added parallelization to dominance analysis function

Pull Request - State: closed - Opened by eric2302 12 months ago - 2 comments
Labels: enhancement

#133 - [ENH] added parallelization to dominance analysis function

Pull Request - State: closed - Opened by eric2302 12 months ago - 2 comments
Labels: enhancement

#132 - Not compatible with `nilearn` version 0.10.1 onwards

Issue - State: closed - Opened by ghisvail about 1 year ago - 1 comment

#131 - Not compatible with Python 3.12

Issue - State: closed - Opened by ghisvail about 1 year ago - 5 comments

#130 - fix: resolve import error when importing _fetch_files from nilearn

Pull Request - State: closed - Opened by NicolasGensollen about 1 year ago - 4 comments

#129 - [MNT] Update readme

Pull Request - State: closed - Opened by liuzhenqi77 about 1 year ago

#128 - [MNT] Update package structure

Pull Request - State: closed - Opened by liuzhenqi77 about 1 year ago - 1 comment

#127 - [FIX] Fix deprecation

Pull Request - State: closed - Opened by liuzhenqi77 about 1 year ago - 2 comments

#126 - [ENH] New stats functions

Pull Request - State: closed - Opened by liuzhenqi77 over 1 year ago - 2 comments

#125 - Unknown vertices between fsaverage Cammoun regions

Issue - State: open - Opened by avaruuser over 1 year ago

#124 - Error with importing the plotting module

Issue - State: closed - Opened by athantas95 over 1 year ago - 1 comment

#123 - [ENH] Added some network metrics and overall maintenance

Pull Request - State: closed - Opened by liuzhenqi77 almost 2 years ago - 1 comment

#122 - Update aspect parameter in plot_point_brain

Issue - State: open - Opened by liuzhenqi77 about 2 years ago

#121 - [FIX] Fix function naming

Pull Request - State: closed - Opened by liuzhenqi77 over 2 years ago - 1 comment
Labels: hacktoberfest-accepted

#120 - [DOC] Update docs

Pull Request - State: closed - Opened by liuzhenqi77 over 2 years ago - 1 comment
Labels: hacktoberfest-accepted

#119 - [MNT] Update versioneer

Pull Request - State: closed - Opened by liuzhenqi77 over 2 years ago - 1 comment
Labels: hacktoberfest-accepted

#118 - [ENH] Added shortest path override

Pull Request - State: closed - Opened by liuzhenqi77 over 2 years ago - 1 comment
Labels: hacktoberfest-accepted

#117 - [ENH] Added navigation

Pull Request - State: closed - Opened by liuzhenqi77 over 2 years ago - 1 comment
Labels: hacktoberfest-accepted

#116 - [ENH] Added shortest path override

Pull Request - State: closed - Opened by liuzhenqi77 over 2 years ago

#115 - [ENH] Added network navigation

Pull Request - State: closed - Opened by liuzhenqi77 over 2 years ago
Labels: hacktoberfest-accepted

#114 - [DOC] Update docs

Pull Request - State: closed - Opened by liuzhenqi77 over 2 years ago
Labels: hacktoberfest-accepted

#113 - Allow return of labelids in find_parcel_centroids

Pull Request - State: open - Opened by pvandyken over 2 years ago

#112 - colormap: how to set it always centered on zero

Issue - State: closed - Opened by weimath over 2 years ago - 2 comments

#111 - [MNT] Import private namespaces if scipy > 1.8.0

Pull Request - State: closed - Opened by VinceBaz about 3 years ago

#110 - Gamma value for consensus partition

Issue - State: closed - Opened by balandongiv over 3 years ago - 4 comments

#109 - Question: functional consensus return value

Issue - State: closed - Opened by gkiar over 3 years ago - 4 comments

#108 - `fetch_civet` missing from pypi release

Issue - State: closed - Opened by ReinderVosDeWael over 3 years ago - 1 comment

#107 - [FIX] GH Actions

Pull Request - State: closed - Opened by liuzhenqi77 over 3 years ago - 4 comments

#106 - Networks

Pull Request - State: closed - Opened by justinehansen over 3 years ago - 3 comments
Labels: hacktoberfest-accepted

#105 - [ENH] Added distance-dependent cross validation

Pull Request - State: open - Opened by justinehansen over 3 years ago - 1 comment

#104 - Add custom_aspect parameter to plot_point_brain.

Pull Request - State: closed - Opened by VinceBaz over 3 years ago - 6 comments

#103 - Added plot_fslr() function and a yerkes19 fetcher

Pull Request - State: closed - Opened by VinceBaz over 3 years ago - 3 comments

#102 - [ENH] Added rich_feeder_peripheral function

Pull Request - State: closed - Opened by justinehansen almost 4 years ago - 2 comments

#101 - [FIX] Fix bug in dominance analysis function

Pull Request - State: closed - Opened by liuzhenqi77 almost 4 years ago - 4 comments

#100 - [ENH] Add fetcher for MMP atlas

Pull Request - State: closed - Opened by rmarkello almost 4 years ago

#99 - [ENH] Adds function to map CIVET to FreeSurfer

Pull Request - State: closed - Opened by rmarkello about 4 years ago - 1 comment

#98 - [DOC] Added example for plotting on fsaverage surface

Pull Request - State: closed - Opened by liuzhenqi77 about 4 years ago - 6 comments

#97 - [ENH] Added dominance stats function

Pull Request - State: closed - Opened by liuzhenqi77 about 4 years ago - 11 comments

#96 - Add dominance analysis function

Issue - State: closed - Opened by liuzhenqi77 about 4 years ago - 1 comment

#95 - [ENH] Creates plot_fsvertex() function

Pull Request - State: closed - Opened by rmarkello about 4 years ago - 4 comments

#94 - [REF] Allow integer inputs in `freesurfer.parcels_to_vertices()`

Pull Request - State: closed - Opened by rmarkello about 4 years ago - 1 comment

#93 - [ENH] Allows spins with only one hemisphere

Pull Request - State: closed - Opened by rmarkello about 4 years ago - 1 comment

#92 - [TEST] Fix GHA

Pull Request - State: closed - Opened by rmarkello about 4 years ago - 1 comment

#91 - [ENH] Updates stats.efficient_pearsonr to handle NaNs

Pull Request - State: closed - Opened by rmarkello about 4 years ago - 1 comment

#90 - [ENH] Added data_kws argument to plot_fsaverage

Pull Request - State: closed - Opened by VinceBaz over 4 years ago - 2 comments

#89 - Added weight option for struct consensus

Pull Request - State: closed - Opened by gkiar over 4 years ago - 2 comments

#88 - Add `fetch_brain_annotations()` function

Issue - State: closed - Opened by rmarkello over 4 years ago - 2 comments
Labels: enhancement

#87 - [ENH] Improves geodesic parcel centroids

Pull Request - State: closed - Opened by rmarkello over 4 years ago - 1 comment

#86 - Allow spins with only one hemisphere

Issue - State: closed - Opened by rmarkello over 4 years ago

#85 - [ENH] Adds lab-useful colormaps

Pull Request - State: closed - Opened by rmarkello over 4 years ago - 2 comments
Labels: hacktoberfest-accepted

#84 - Conversion to float in freesurfer.parcels_to_vertices

Issue - State: closed - Opened by VinceBaz over 4 years ago - 1 comment

#83 - [ENH] Adds info CSV file to von Economo fetcher

Pull Request - State: closed - Opened by rmarkello over 4 years ago - 1 comment

#82 - [REF] Modifies freesurfer spins

Pull Request - State: closed - Opened by rmarkello over 4 years ago - 1 comment

#81 - [ENH] Adds von Economo-Koskinas atlas fetcher

Pull Request - State: closed - Opened by rmarkello over 4 years ago - 1 comment

#80 - [ENH] add features to plot_mod_heatmap

Pull Request - State: closed - Opened by liuzhenqi77 almost 5 years ago - 2 comments

#79 - [FIX] np.nanmean in func consensus when no boot

Pull Request - State: closed - Opened by VinceBaz almost 5 years ago - 2 comments

#78 - [REF] Pass through kwargs to plot_fsaverage

Pull Request - State: closed - Opened by rmarkello almost 5 years ago - 1 comment

#77 - [FIX] Minor change to spin sample generation

Pull Request - State: closed - Opened by rmarkello almost 5 years ago - 1 comment