Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / ndcn/infer-subc issues and pull requests

#85 - Dev v1

Pull Request - State: closed - Opened by shanrhoads 10 days ago

#84 - Ncontacts

Pull Request - State: closed - Opened by zcoman 4 months ago

#83 - Revert "N-Contacts User Friendly Version"

Pull Request - State: closed - Opened by shanrhoads 4 months ago

#82 - N-Contacts User Friendly Version

Pull Request - State: closed - Opened by zcoman 4 months ago

#81 - nth Order Contacts, Redundancy Checks, and Contacts Notebook

Pull Request - State: closed - Opened by zcoman 5 months ago

#79 - Multiway contacts V1 batch process

Pull Request - State: closed - Opened by zcoman 6 months ago - 1 comment

#78 - Plasma Membrane Addition & Minor Adjustments to Cellmask D

Pull Request - State: closed - Opened by zcoman 6 months ago

#77 - Updating ranges and ease of batch processing

Pull Request - State: closed - Opened by zcoman 7 months ago

#76 - Fixed constants being present in membrane.py

Pull Request - State: closed - Opened by zcoman 8 months ago

#75 - Cellmasks for Sherry and Maria Clara

Pull Request - State: closed - Opened by zcoman 8 months ago

#74 - Masks C & D

Pull Request - State: closed - Opened by zscoman 8 months ago

#72 - Sr fixes2

Pull Request - State: closed - Opened by shanrhoads 8 months ago

#71 - created new workflow for astrocyte mask seg

Pull Request - State: closed - Opened by shanrhoads about 1 year ago

#70 - Pypifix

Pull Request - State: closed - Opened by ergonyc about 1 year ago

#69 - reformat notesbook and workflows, part 4

Pull Request - State: closed - Opened by shanrhoads over 1 year ago

#68 - SR updates

Pull Request - State: closed - Opened by shanrhoads over 1 year ago

#67 - Documentation Cleanup

Issue - State: open - Opened by ergonyc over 1 year ago - 1 comment

#66 - Pypy

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#65 - Pypy

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#64 - reset version

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#63 - test pending publisher8 post tags

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#62 - test pending publisher7

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#61 - test pending publisher6

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#60 - test pending publisher5

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#59 - test pending publisher4

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#58 - test pending publisher3

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#57 - Pypy

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#56 - more actions testing

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#55 - test publish2

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#54 - pypy deploy 2

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#53 - pypi actions tst 0

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#52 - Importcleanup

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#51 - fixe stats bug for shannon

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#50 - convert setup to toml and cfg

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#49 - Docfix 2

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#48 - final bug fix. documentation to do

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#47 - Docclean

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#46 - prep for final v1.0

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#45 - add minimal metadata to tiff via tifffile

Issue - State: open - Opened by ergonyc over 1 year ago

#44 - cleanup / rebase

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#43 - Docclean

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#42 - renamed module to infer_subc

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#41 - finalize stats final_io notebook

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#40 - Wfcleanup 2

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#39 - Wfcleanup

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#38 - Wfcleanup

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#37 - created alt nucleus, cytoplasm, and cell mask

Pull Request - State: closed - Opened by shanrhoads over 1 year ago - 4 comments

#36 - Main dev

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#35 - Main dev

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#34 - Main dev

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#33 - Main dev

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#32 - Sr 2 dto3 d

Pull Request - State: closed - Opened by shanrhoads over 1 year ago - 2 comments

#31 - improve notebook dev with nbdime and/or nbdev

Issue - State: open - Opened by ergonyc over 1 year ago

#30 - simplify requirements.txt

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#29 - Main dev

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#28 - [CJS] Small cosmetic changes to README.md

Pull Request - State: closed - Opened by cjsifuen over 1 year ago

#27 - [CJS] Closes #24 , #23

Pull Request - State: closed - Opened by cjsifuen over 1 year ago

#26 - sync main-dev

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#25 - Sr 2 dto3 d

Pull Request - State: closed - Opened by ergonyc over 1 year ago

#24 - Order of steps for the workflow

Issue - State: closed - Opened by cjsifuen over 1 year ago - 3 comments
Labels: documentation, question

#23 - Add/update links to notebooks in README.md

Issue - State: closed - Opened by cjsifuen over 1 year ago
Labels: bug, documentation

#22 - Bump certifi from 2022.9.14 to 2022.12.7

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#21 - update workflows 1 + depricate QC

Pull Request - State: closed - Opened by ergonyc almost 2 years ago

#20 - Bump pillow from 8.4.0 to 9.3.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#19 - Bump joblib from 1.1.0 to 1.2.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#18 - update docs/.../batch.md & workflow.md

Pull Request - State: closed - Opened by ergonyc almost 2 years ago

#17 - updated README.md & docs/index.md

Pull Request - State: closed - Opened by ergonyc almost 2 years ago

#16 - final cleanup-dv

Pull Request - State: closed - Opened by ergonyc almost 2 years ago

#15 - format cleanup for mkdocs site

Pull Request - State: closed - Opened by ergonyc almost 2 years ago

#14 - setting up github.io 3

Pull Request - State: closed - Opened by ergonyc almost 2 years ago

#13 - Main dev update ci - gh-pages

Pull Request - State: closed - Opened by ergonyc almost 2 years ago

#12 - Main dev

Pull Request - State: closed - Opened by ergonyc almost 2 years ago

#11 - Main dev

Pull Request - State: closed - Opened by ergonyc almost 2 years ago

#10 - Main dev

Pull Request - State: closed - Opened by ergonyc almost 2 years ago

#9 - batch failure logging and qc_testing / priors + region props

Issue - State: open - Opened by ergonyc almost 2 years ago - 1 comment
Labels: enhancement, question

#8 - Main dev

Pull Request - State: closed - Opened by ergonyc almost 2 years ago

#7 - Nochan

Pull Request - State: closed - Opened by ergonyc almost 2 years ago

#6 - Main dev

Pull Request - State: closed - Opened by ergonyc about 2 years ago

#5 - refactors in main dev to merge

Pull Request - State: closed - Opened by ergonyc about 2 years ago

#4 - Clean up install / makefile / template

Issue - State: open - Opened by ergonyc about 2 years ago
Labels: enhancement, question

#3 - Add exception handling logging to wrapper functions

Issue - State: closed - Opened by ergonyc about 2 years ago - 1 comment
Labels: enhancement, question

#2 - acissegmentation Workflows shim needed

Issue - State: closed - Opened by ergonyc about 2 years ago - 1 comment
Labels: enhancement, question

#1 - Fix OME for exporting TIFF and .czi

Issue - State: open - Opened by ergonyc about 2 years ago
Labels: enhancement, question