ncbo/bioportal_web_ui issues and pull requests

#317 - Upgrade from MySQL 5.7 to the 8.0 series

Issue - State: open - Opened by jvendetti 4 months ago - 1 comment
Labels: enhancement

#316 - Add UI support for regenerating API keys

Issue - State: open - Opened by jvendetti 4 months ago
Labels: enhancement

#315 - Add fields to the sign up page for GitHub and ORCID IDs

Issue - State: open - Opened by jvendetti 5 months ago
Labels: enhancement

#314 - Add a natural language selector to the ontology submission form

Pull Request - State: closed - Opened by jvendetti 5 months ago - 2 comments
Labels: enhancement

#313 - Migrate from SassC to Dart Sass

Pull Request - State: open - Opened by jvendetti 6 months ago - 2 comments

#312 - Migrate from Select2 and Chosen to tom-select

Issue - State: open - Opened by jvendetti 6 months ago - 3 comments
Labels: enhancement

#311 - Add a natural language selector to the ontology submission form

Issue - State: closed - Opened by jvendetti 6 months ago - 4 comments
Labels: enhancement

#310 - Add OBO Id Badges for terms that are OBO Ids

Issue - State: open - Opened by matthewhorridge 7 months ago - 3 comments
Labels: enhancement

#309 - Rails 7.0.8 upgrade (part two)

Pull Request - State: closed - Opened by jvendetti 7 months ago
Labels: enhancement

#308 - /notes/<note_id> page doesn't work as expected

Issue - State: closed - Opened by alexskr 8 months ago - 4 comments
Labels: bug

#306 - Remove / retire OntoloBridge term request integration

Issue - State: open - Opened by jvendetti 8 months ago
Labels: ontolobridge

#305 - Implement subscribing to ontology update notification

Issue - State: open - Opened by alexskr 8 months ago - 14 comments
Labels: enhancement

#304 - category list on the browse ontologies page displays some of the list items as ...

Issue - State: open - Opened by alexskr 8 months ago

#303 - Move GA measurement ID out of encrypted credentials

Issue - State: open - Opened by jvendetti 8 months ago

#302 - Upgrade Rails from 6.1.7.3 to 7.0.8

Pull Request - State: closed - Opened by jvendetti 9 months ago

#301 - Fix various issues with notes emails subscriptions

Pull Request - State: closed - Opened by jvendetti 10 months ago

#300 - Subscribing to notes emails fails for users with '@' symbols in the username

Issue - State: closed - Opened by jvendetti 10 months ago
Labels: bug

#299 - Login as functionality fails for users with '@' symbols in the username

Issue - State: closed - Opened by jvendetti 10 months ago
Labels: bug

#298 - Subscribe to notes emails button should redirect to login for anonymous users

Issue - State: closed - Opened by jvendetti 10 months ago - 1 comment
Labels: bug

#297 - Upgrade to Rails 7.0

Issue - State: closed - Opened by jvendetti 10 months ago - 1 comment
Labels: enhancement

#296 - Enlarge search result text size in the "Find an ontology" text box

Issue - State: closed - Opened by jvendetti 10 months ago - 1 comment

#295 - Bootstrap 5 tweaks

Pull Request - State: closed - Opened by jvendetti 11 months ago

#294 - Add download link for Virtual Appliance v3.2.2

Pull Request - State: closed - Opened by alexskr 11 months ago

#293 - apache-mod-passenger and base64 v0.1.1+ gem conflict

Issue - State: open - Opened by alexskr 11 months ago

#292 - Unchecking "is a view of" during ontology edit has no effect

Issue - State: open - Opened by jvendetti 12 months ago - 1 comment
Labels: bug

#291 - add download link for OntoPortal Virtual Appliance v3.2.1

Pull Request - State: closed - Opened by alexskr 12 months ago

#290 - add download link for OntoPortal appliance v3.2.1

Pull Request - State: closed - Opened by alexskr 12 months ago

#289 - Implement add and change definition ontology change request types

Issue - State: open - Opened by jvendetti 12 months ago
Labels: enhancement

#288 - Fix issues in the Admin Console with ontology and submission deletion

Pull Request - State: closed - Opened by jvendetti about 1 year ago

#287 - Ontology deletion from Administration Console fails with 500 error

Issue - State: closed - Opened by jvendetti about 1 year ago
Labels: bug

#286 - BioPortal Slice link in slices banner results in 500 error

Issue - State: closed - Opened by jvendetti about 1 year ago - 1 comment
Labels: bug

#285 - Record deployments to NewRelic

Pull Request - State: open - Opened by alexskr about 1 year ago

#284 - Refactor: upgrade Ruby from 2.7 to 3.0.6

Pull Request - State: closed - Opened by jvendetti about 1 year ago

#283 - Rails application can't boot in production because of IssueCreatorService

Issue - State: closed - Opened by syphax-bouazzouni about 1 year ago - 3 comments

#282 - Creating mappings between ontology classes fails

Issue - State: open - Opened by jvendetti about 1 year ago - 2 comments

#281 - fix formatting issue with displaying errors. #57

Pull Request - State: closed - Opened by alexskr about 1 year ago - 1 comment

#280 - update capistrano deployment to work with ruby 3.0

Pull Request - State: closed - Opened by alexskr about 1 year ago

#279 - Implement the NodeRename ontology change request type

Pull Request - State: closed - Opened by jvendetti about 1 year ago

#278 - Implement "rename" ontology change request type

Issue - State: closed - Opened by jvendetti about 1 year ago

#277 - Retire code for ontology reviews

Pull Request - State: closed - Opened by jvendetti about 1 year ago

#276 - Remove $LEGACY_REST_URL environment variable and associated code

Pull Request - State: closed - Opened by jvendetti about 1 year ago

#275 - Code refactoring for issues with class permalinks

Pull Request - State: closed - Opened by jvendetti about 1 year ago

#274 - Change title and dialog text to remove "permanent link to this class"

Issue - State: closed - Opened by jvendetti about 1 year ago

#274 - Change title and dialog text to remove "permanent link to this class"

Issue - State: closed - Opened by jvendetti about 1 year ago

#273 - Advance Rails to 6.1.7.3

Pull Request - State: closed - Opened by jvendetti about 1 year ago

#273 - Advance Rails to 6.1.7.3

Pull Request - State: closed - Opened by jvendetti about 1 year ago

#272 - Class permalinks result in 404 Not Found

Issue - State: closed - Opened by jvendetti over 1 year ago - 3 comments
Labels: bug

#271 - Universal Analytics -> Google Analytics 4 migration

Pull Request - State: closed - Opened by jvendetti over 1 year ago - 3 comments

#270 - Update _ga_tracking partial with new Google Analytics tag

Issue - State: closed - Opened by jvendetti over 1 year ago - 2 comments

#270 - Update _ga_tracking partial with new Google Analytics tag

Issue - State: closed - Opened by jvendetti over 1 year ago - 2 comments

#269 - Analytics model has vulnerable serialized column

Issue - State: closed - Opened by jvendetti over 1 year ago - 1 comment

#268 - Link to UMLS licensing information is broken

Issue - State: closed - Opened by jvendetti over 1 year ago - 3 comments

#267 - Upgrade to Bootstrap 5

Pull Request - State: closed - Opened by jvendetti over 1 year ago
Labels: enhancement

#266 - Encrypted credentials modifications for virtual appliance deployments

Pull Request - State: closed - Opened by jvendetti over 1 year ago

#266 - Encrypted credentials modifications for virtual appliance deployments

Pull Request - State: closed - Opened by jvendetti over 1 year ago

#265 - Encrypted credentials for appliance

Issue - State: closed - Opened by alexskr over 1 year ago - 10 comments

#264 - Retire unused code related to using the Annotator with the batch endpoint

Issue - State: open - Opened by jvendetti over 1 year ago - 1 comment

#264 - Retire unused code related to using the Annotator with the batch endpoint

Issue - State: open - Opened by jvendetti over 1 year ago - 1 comment

#263 - Property "has endpoint" is missing from BAO property tree.

Issue - State: closed - Opened by mdorf over 1 year ago - 1 comment
Labels: invalid

#263 - Property "has endpoint" is missing from BAO property tree.

Issue - State: closed - Opened by mdorf over 1 year ago - 1 comment
Labels: invalid

#262 - Bump nokogiri from 1.13.10 to 1.14.3

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#261 - Fix: ontology delete response error handelling

Pull Request - State: closed - Opened by syphax-bouazzouni over 1 year ago - 2 comments

#260 - UI Admin interface shows error 'JSON::ParserError: unexpected token at' when deleting ontologies

Issue - State: closed - Opened by alexskr over 1 year ago - 3 comments

#260 - UI Admin interface shows error 'JSON::ParserError: unexpected token at' when deleting ontologies

Issue - State: closed - Opened by alexskr over 1 year ago - 3 comments

#259 - potential UX issue with setting obsolete branch/property in OWL advanced settings

Issue - State: open - Opened by alexskr over 1 year ago

#258 - Bump rack from 2.2.6.3 to 2.2.6.4

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#257 - Retire old code for reveiwing ontologies

Issue - State: closed - Opened by jvendetti over 1 year ago - 2 comments

#257 - Retire old code for reveiwing ontologies

Issue - State: closed - Opened by jvendetti over 1 year ago - 2 comments

#256 - Bump rack from 2.2.6.2 to 2.2.6.3

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#255 - Submission update failures result in "No template found" errors

Issue - State: closed - Opened by jvendetti over 1 year ago - 1 comment
Labels: bug

#254 - Enable table sorting for the Mappings tabs within ontologies

Issue - State: closed - Opened by jvendetti over 1 year ago

#253 - Create new mapping dialog unreadable (again)

Issue - State: closed - Opened by jvendetti over 1 year ago - 1 comment
Labels: bug

#252 - ArgumentError (`render file:` should be given the absolute path to a file. '/ontologies/visualize' was given instead)

Issue - State: closed - Opened by alexskr over 1 year ago - 3 comments
Labels: bug

#251 - ruby v3 support

Issue - State: closed - Opened by alexskr over 1 year ago - 1 comment

#250 - legacy virtual ontology id to acronym resolver broke

Issue - State: closed - Opened by alexskr over 1 year ago - 5 comments
Labels: bug

#249 - NameError (wrong constant name XYZController) when accessing non-existent paths

Issue - State: closed - Opened by alexskr over 1 year ago

#248 - Fix code scanning alert - All public methods in controllers are available as actions in routes.rb.

Issue - State: closed - Opened by alexskr over 1 year ago - 3 comments

#247 - Bump globalid from 1.0.0 to 1.0.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#246 - Fix: Admin ontology process success message

Pull Request - State: closed - Opened by syphax-bouazzouni over 1 year ago

#245 - Bump rack from 2.2.4 to 2.2.6.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#244 - mandatory field "contacts" is not being enforced when editing ontology submission

Issue - State: open - Opened by alexskr over 1 year ago - 1 comment

#243 - Project deletion via the Projects page shows erroneous error message

Issue - State: closed - Opened by jvendetti over 1 year ago - 2 comments
Labels: bug

#242 - Fix: Jump to and form autocomplete widgets JS

Pull Request - State: closed - Opened by syphax-bouazzouni over 1 year ago

#241 - Uninitialized constant exception when $EMAIL_EXCEPTIONS is set to true

Issue - State: open - Opened by jvendetti over 1 year ago

#240 - Refactor: Handle response errors status

Pull Request - State: closed - Opened by syphax-bouazzouni almost 2 years ago - 2 comments

#239 - already initialized constant Net::ProtocRetryError warnings

Issue - State: closed - Opened by jvendetti almost 2 years ago - 8 comments

#238 - Exception uninitialized constant KGCL::Operations

Issue - State: closed - Opened by syphax-bouazzouni almost 2 years ago - 2 comments

#237 - Bump rails-html-sanitizer from 1.4.3 to 1.4.4

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#236 - Bump loofah from 2.19.0 to 2.19.1

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#235 - Feature: Add infinite scroll container view component

Pull Request - State: open - Opened by syphax-bouazzouni almost 2 years ago

#234 - Add initial support for ontology change requests

Pull Request - State: closed - Opened by jvendetti almost 2 years ago
Labels: enhancement, KB Aim3 Change Request

#233 - Bump nokogiri from 1.13.8 to 1.13.10

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#232 - retire and remove old redirects

Issue - State: closed - Opened by alexskr almost 2 years ago - 3 comments

#231 - unprotected redirect

Issue - State: closed - Opened by alexskr almost 2 years ago - 2 comments

#230 - Bump dalli from 3.2.2 to 3.2.3

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#229 - Feature: Add docker environment for the UI

Pull Request - State: open - Opened by syphax-bouazzouni almost 2 years ago - 1 comment
Labels: enhancement

#228 - Feature: Not found message by context

Pull Request - State: open - Opened by syphax-bouazzouni almost 2 years ago - 3 comments

#226 - Bump nokogiri from 1.13.8 to 1.13.9

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#223 - Refactor: Update ontology viewer from old JS to Turbo + Stimulus

Pull Request - State: open - Opened by syphax-bouazzouni about 2 years ago - 5 comments
Labels: enhancement

#222 - Add github action deployment workflow

Pull Request - State: closed - Opened by alexskr about 2 years ago

GitHub / ncbo/bioportal_web_ui issues and pull requests