Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / nbx0/spyne issues and pull requests

#34 - Influenza B duplicate reference for variant calls

Issue - State: closed - Opened by kristinelacek over 1 year ago - 3 comments

#33 - cdcGov github

Issue - State: closed - Opened by kristinelacek over 1 year ago - 1 comment

#32 - Empty barcode handling

Pull Request - State: closed - Opened by kristinelacek over 1 year ago

#31 - nanopore error handling at irma failure for empty input

Pull Request - State: closed - Opened by kristinelacek over 1 year ago - 4 comments

#30 - dict comprehension to convert int to str

Pull Request - State: closed - Opened by kristinelacek over 1 year ago

#29 - Illumina sc2

Pull Request - State: closed - Opened by kristinelacek over 1 year ago - 1 comment

#28 - Illumina flu

Pull Request - State: open - Opened by kristinelacek over 1 year ago

#27 - squashed inifinite loop of snakemake kickoff

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#26 - I AM SO CREATIVE OMG

Pull Request - State: closed - Opened by kristinelacek almost 2 years ago

#25 - run snakemake with footprint reduction && until dash-json/heatmap.jso…

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#24 - Harmonize2composenaming

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#23 - Fixcheckpoint

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#22 - uhhh are we checkpointing?

Issue - State: open - Opened by nbx0 about 2 years ago

#21 - fixed dag

Pull Request - State: closed - Opened by kristinelacek about 2 years ago

#20 - mean to median coverage qc

Pull Request - State: closed - Opened by nbx0 about 2 years ago

#20 - mean to median coverage qc

Pull Request - State: closed - Opened by nbx0 about 2 years ago

#19 - Move subsampling rule before barcode trimming but after fastq cat-ting

Pull Request - State: closed - Opened by rchau88 about 2 years ago - 1 comment

#18 - Move subsampling rule before barcode trimming but after fastq cat-ting

Issue - State: closed - Opened by kristinelacek about 2 years ago - 1 comment

#17 - Rename spyne

Pull Request - State: closed - Opened by nbx0 about 2 years ago

#16 - bugsmash in prepareIRMAjson.py

Pull Request - State: closed - Opened by nbx0 about 2 years ago

#15 - qc and coverage heatmap properly assignes all cells colors

Pull Request - State: closed - Opened by nbx0 about 2 years ago

#14 - warm stop codon in yellow heatmap and still deliver to fasta

Pull Request - State: closed - Opened by nbx0 about 2 years ago

#13 - Rename EXP-PBC096.yaml to EXP-NBD196.yaml

Pull Request - State: closed - Opened by kristinelacek about 2 years ago

#12 - Container init

Pull Request - State: closed - Opened by nbx0 about 2 years ago

#11 - Save passed fastas

Pull Request - State: closed - Opened by nbx0 about 2 years ago

#10 - Cleanup files

Pull Request - State: closed - Opened by kristinelacek about 2 years ago

#9 - Auto qc

Pull Request - State: closed - Opened by nbx0 about 2 years ago

#8 - ready to merge

Pull Request - State: closed - Opened by nbx0 about 2 years ago - 1 comment

#7 - Irma2json

Pull Request - State: closed - Opened by nbx0 about 2 years ago

#6 - moving config kickoff here

Pull Request - State: closed - Opened by kristinelacek over 2 years ago

#5 - snakemake for illumina flu, logging

Pull Request - State: closed - Opened by kristinelacek over 2 years ago

#4 - finalized the flow and vibes

Pull Request - State: closed - Opened by kristinelacek over 2 years ago

#3 - perms problem circumvented

Pull Request - State: closed - Opened by kristinelacek over 2 years ago

#2 - Snakefile upgrades

Pull Request - State: closed - Opened by kristinelacek over 2 years ago

#1 - Spy backend

Pull Request - State: closed - Opened by kristinelacek over 2 years ago