nbx0/mira issues and pull requests

#61 - Mv

Pull Request - State: closed - Opened by nbx0 over 1 year ago

#61 - Mv

Pull Request - State: closed - Opened by nbx0 over 1 year ago

#60 - cdcgov url

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#60 - cdcgov url

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#59 - Update mira-installation.Rmd

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#59 - Update mira-installation.Rmd

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#58 - Update MIRA-INSTALL.sh

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#58 - Update MIRA-INSTALL.sh

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#57 - Update README.md

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#57 - Update README.md

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#56 - KL orcid

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#56 - KL orcid

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#55 - readme fig

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#55 - readme fig

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#54 - Update _pkgdown.yml

Pull Request - State: closed - Opened by rchau88 almost 2 years ago

#54 - Update _pkgdown.yml

Pull Request - State: closed - Opened by rchau88 almost 2 years ago

#53 - updates

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#53 - updates

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#52 - bug smash

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#52 - bug smash

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#51 - Towards panama

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#51 - Towards panama

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#50 - Update _pkgdown.yml

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#49 - Update MIRA-INSTALL.sh

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#49 - Update MIRA-INSTALL.sh

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#48 - Rename mira

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#48 - Rename mira

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#47 - allow for custom references for DAIS.

Issue - State: open - Opened by nbx0 almost 2 years ago

#47 - allow for custom references for DAIS.

Issue - State: open - Opened by nbx0 almost 2 years ago

#46 - Export/Import SeqSender templates

Issue - State: open - Opened by nbx0 almost 2 years ago - 1 comment

#45 - Add in SeqSender

Issue - State: open - Opened by nbx0 almost 2 years ago

#45 - Add in SeqSender

Issue - State: open - Opened by nbx0 almost 2 years ago

#44 - remove docker-compose warnings

Issue - State: open - Opened by nbx0 almost 2 years ago

#44 - remove docker-compose warnings

Issue - State: open - Opened by nbx0 almost 2 years ago

#43 - filter shown variants and indels >x%

Issue - State: closed - Opened by nbx0 almost 2 years ago - 4 comments

#43 - filter shown variants and indels >x%

Issue - State: closed - Opened by nbx0 almost 2 years ago - 4 comments

#42 - Update README.md

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#42 - Update README.md

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#41 - Update README.md

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#41 - Update README.md

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#40 - Update README.md

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#40 - Update README.md

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#39 - Update pkgdown.yaml

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#39 - Update pkgdown.yaml

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#38 - Update README.md

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#38 - Update README.md

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#37 - Rename irmavision

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#37 - Rename irmavision

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#36 - trying to get prod along with dev gh-pages

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#36 - trying to get prod along with dev gh-pages

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#35 - irmavision_install edits

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#35 - irmavision_install edits

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#34 - irmavision_install edits

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#34 - irmavision_install edits

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#33 - samplesheet error message moved

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#33 - samplesheet error message moved

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#32 - assembly finish notification fixed

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#32 - assembly finish notification fixed

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#31 - have proper run finish notification

Issue - State: closed - Opened by nbx0 almost 2 years ago

#31 - have proper run finish notification

Issue - State: closed - Opened by nbx0 almost 2 years ago

#30 - create better run status indicator

Issue - State: open - Opened by nbx0 almost 2 years ago

#29 - assemble button shell=False; docker install script dir corrected

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#29 - assemble button shell=False; docker install script dir corrected

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#28 - purge .appout .apperr regularly

Issue - State: closed - Opened by nbx0 almost 2 years ago

#28 - purge .appout .apperr regularly

Issue - State: closed - Opened by nbx0 almost 2 years ago

#27 - more fault tolerance

Issue - State: closed - Opened by nbx0 almost 2 years ago

#27 - more fault tolerance

Issue - State: closed - Opened by nbx0 almost 2 years ago

#26 - added shell=True to assembly button

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#26 - added shell=True to assembly button

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#25 - CLEANUP-FOOTPRINT arg added to iSpy

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#25 - CLEANUP-FOOTPRINT arg added to iSpy

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#24 - fix launch paths between the containers.

Issue - State: closed - Opened by nbx0 almost 2 years ago

#24 - fix launch paths between the containers.

Issue - State: closed - Opened by nbx0 almost 2 years ago

#23 - exec c spyne cmd missing data_root

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#23 - exec c spyne cmd missing data_root

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#22 - install script

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#22 - install script

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#21 - Trying2bkgndsnake

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#21 - Trying2bkgndsnake

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#20 - bring reina's changes in

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#20 - bring reina's changes in

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#19 - Update dockerfile to align with new name of the repo

Pull Request - State: closed - Opened by rchau88 almost 2 years ago

#19 - Update dockerfile to align with new name of the repo

Pull Request - State: closed - Opened by rchau88 almost 2 years ago

#18 - jsons now read from runid/dash-json/ dir to accomodate updates to spyne

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#18 - jsons now read from runid/dash-json/ dir to accomodate updates to spyne

Pull Request - State: closed - Opened by nbx0 almost 2 years ago

#17 - Docker compose

Pull Request - State: closed - Opened by rchau88 almost 2 years ago

#17 - Docker compose

Pull Request - State: closed - Opened by rchau88 almost 2 years ago

#16 - add pop ups re: strain naming

Issue - State: open - Opened by nbx0 about 2 years ago

#16 - add pop ups re: strain naming

Issue - State: open - Opened by nbx0 about 2 years ago

#15 - test data removed

Pull Request - State: closed - Opened by nbx0 about 2 years ago

#15 - test data removed

Pull Request - State: closed - Opened by nbx0 about 2 years ago

#14 - added tiny test data

Pull Request - State: closed - Opened by nbx0 about 2 years ago

#14 - added tiny test data

Pull Request - State: closed - Opened by nbx0 about 2 years ago

#13 - irma summary header fix

Pull Request - State: closed - Opened by nbx0 about 2 years ago

#13 - irma summary header fix

Pull Request - State: closed - Opened by nbx0 about 2 years ago

#12 - fixed samplesheet save function

Pull Request - State: closed - Opened by nbx0 about 2 years ago

#12 - fixed samplesheet save function

Pull Request - State: closed - Opened by nbx0 about 2 years ago

#11 - add references

Issue - State: open - Opened by nbx0 about 2 years ago - 2 comments

#11 - add references

Issue - State: open - Opened by nbx0 about 2 years ago - 2 comments

#10 - decouple run button from spyne

Issue - State: closed - Opened by nbx0 about 2 years ago

GitHub / nbx0/mira issues and pull requests