Ecosyste.ms: Issues

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GitHub / natcap/pygeoprocessing issues and pull requests

#424 - Updating history for the 2.4.7 release. RE:#423

Pull Request - State: closed - Opened by phargogh 27 days ago

#423 - Do the 2.4.7 release

Issue - State: open - Opened by phargogh 27 days ago
Labels: in progress

#422 - Adding type checking for base, target path inputs to `warp_raster`

Pull Request - State: closed - Opened by phargogh about 1 month ago

#421 - `warp_raster` doesn't raise a helpful error if the source raster path isn't a string

Issue - State: closed - Opened by phargogh about 1 month ago
Labels: bug, in progress

#420 - Check for non-numeric keys in value_map in reclassify raster function #419

Pull Request - State: closed - Opened by claire-simpson 2 months ago - 4 comments

#418 - `reproject_vector` fails on non-UTF-8 strings

Issue - State: open - Opened by davemfish 3 months ago - 2 comments
Labels: bug

#416 - test and build against Python 3.13 and GDAL 3.9

Pull Request - State: closed - Opened by davemfish 4 months ago

#415 - Support Python 3.13 and GDAL 3.9

Issue - State: closed - Opened by davemfish 4 months ago

#414 - Allow users to provide numpy dtypes as raster types

Issue - State: open - Opened by phargogh 4 months ago
Labels: enhancement

#413 - Update HISTORY.rst for the pygeoprocessing 2.4.6 release.

Pull Request - State: closed - Opened by phargogh 4 months ago

#412 - Do a 2.4.6 release

Issue - State: closed - Opened by phargogh 4 months ago - 1 comment
Labels: task, in progress

#411 - Add an LRU Cache to the convolution worker

Pull Request - State: open - Opened by phargogh 4 months ago

#410 - Handle GDAL exceptions raised in `reproject_vector`

Pull Request - State: closed - Opened by phargogh 4 months ago

#409 - GDAL's exceptions not handled with `reproject_vector`

Issue - State: closed - Opened by phargogh 4 months ago
Labels: bug, in progress

#406 - Improve exception on `convolve_2d` worker timeout

Pull Request - State: closed - Opened by phargogh 4 months ago

#405 - Remove the numpy version cap

Pull Request - State: closed - Opened by phargogh 4 months ago

#404 - Update HISTORY.rst for 2.4.5 release.

Pull Request - State: closed - Opened by phargogh 4 months ago

#403 - Do the pygeoprocessing 2.4.5 release for numpy 2.0 compatibility

Issue - State: closed - Opened by phargogh 4 months ago - 1 comment
Labels: task

#402 - use functools.wraps with gdal exceptions decorator

Pull Request - State: closed - Opened by emlys 8 months ago

#401 - Fix compilation/testing issues against numpy 2.0

Pull Request - State: closed - Opened by phargogh 8 months ago

#400 - replace gdal exceptions decorator with context manager

Pull Request - State: closed - Opened by emlys 8 months ago

#399 - Build issues with conda-forge's gdal 3.8+

Issue - State: closed - Opened by phargogh 8 months ago - 1 comment
Labels: bug

#398 - Adding a DOI to the slope citation.

Pull Request - State: closed - Opened by phargogh 8 months ago

#397 - Minor updates for numpy 2.0 compatibility

Pull Request - State: closed - Opened by phargogh 8 months ago

#396 - Ensure compatibility with numpy 2.0

Issue - State: closed - Opened by phargogh 8 months ago
Labels: bug, in progress

#395 - Naming NatCap SW Team the maintainers

Pull Request - State: closed - Opened by phargogh 8 months ago

#394 - fix RST syntax error

Pull Request - State: closed - Opened by emlys 9 months ago

#393 - 2.4.4 release

Pull Request - State: closed - Opened by emlys 9 months ago

#392 - enable gdal.UseExceptions throughout pygeoprocessing

Pull Request - State: closed - Opened by emlys 10 months ago - 3 comments

#391 - Enable `gdal.UseExceptions()`

Issue - State: closed - Opened by emlys 10 months ago
Labels: task, in progress

#390 - update to cython 3

Pull Request - State: closed - Opened by emlys 10 months ago

#389 - Implement decaying D8 flow accumulation

Pull Request - State: closed - Opened by phargogh 11 months ago

#388 - proposal/bugfix: Remove checks for gdal resampling algorithm values

Pull Request - State: closed - Opened by emlys 11 months ago

#387 - GDAL warp algorithm names missing with GDAL>=3.8.5

Issue - State: closed - Opened by emlys 11 months ago
Labels: bug

#386 - Contribute Pollutant Decay to Flow Accumulation

Issue - State: closed - Opened by phargogh 11 months ago
Labels: enhancement

#384 - Update actions to use node 20

Issue - State: closed - Opened by phargogh 12 months ago
Labels: bug

#383 - Moving wheel build into today's release

Pull Request - State: closed - Opened by phargogh 12 months ago

#382 - Add python 3.12 to our wheel build action

Pull Request - State: closed - Opened by phargogh 12 months ago

#381 - Python 3.12 wheels missing from the wheel build actions

Issue - State: closed - Opened by phargogh 12 months ago - 1 comment
Labels: bug

#380 - Pygeoprocessing 2.4.3 Release

Pull Request - State: closed - Opened by phargogh 12 months ago

#379 - Do the pygeoprocessing 2.4.3 release

Issue - State: closed - Opened by phargogh 12 months ago
Labels: task

#378 - Support for python 3.12 in PyGeoprocessing?

Issue - State: closed - Opened by shaoweiYoung 12 months ago - 2 comments

#377 - Proposal: Enable Optional Parallelism in PyGeoProcessing

Issue - State: open - Opened by phargogh 12 months ago - 1 comment
Labels: proposal

#376 - `get_gis_type` remote file access

Pull Request - State: closed - Opened by davemfish 12 months ago

#375 - `get_gis_type` should work on remote datasets

Issue - State: closed - Opened by davemfish 12 months ago

#374 - Compare `reproject_vector` to `gdal.VectorTranslate`

Issue - State: open - Opened by phargogh 12 months ago
Labels: question

#373 - Would an LRUCache add anything to `convolve_2d`?

Issue - State: open - Opened by phargogh 12 months ago
Labels: question

#372 - Add explicit support for python 3.12

Pull Request - State: closed - Opened by phargogh about 1 year ago

#371 - Allow for user provided vector field to be used as the unique key in `zonal_statistics`

Issue - State: open - Opened by dcdenu4 about 1 year ago
Labels: enhancement

#370 - Add "average" metric to zonal statistics

Issue - State: open - Opened by dcdenu4 about 1 year ago
Labels: enhancement

#369 - Fix minor logging issue in `zonal_statistics`

Pull Request - State: closed - Opened by phargogh about 1 year ago

#368 - Logging for `zonal_statistics` slightly incorrect

Issue - State: closed - Opened by phargogh about 1 year ago
Labels: bug, in progress

#367 - Only rasterize once in `align_and_resize_raster_stack`

Pull Request - State: closed - Opened by phargogh about 1 year ago - 1 comment

#366 - Duplicate rasterization in `align_and_resize_raster_stack` when masking with a vector

Issue - State: closed - Opened by phargogh about 1 year ago - 1 comment
Labels: enhancement, in progress

#365 - Bugfix for nodata handling in `extract_strahler_streams_d8`

Pull Request - State: closed - Opened by davemfish about 1 year ago

#364 - Parallelize `align_and_resize_raster_stack`?

Issue - State: open - Opened by phargogh about 1 year ago
Labels: enhancement

#363 - calculate_subwatershed_boundary TypeError given a NoneType argument

Issue - State: closed - Opened by davemfish about 1 year ago - 2 comments
Labels: bug

#362 - Log or warn if GDAL's cache exceeds SLURM's allocated node memory

Pull Request - State: closed - Opened by phargogh about 1 year ago

#361 - Warn about setting a GDAL cache max if probably on a SLURM node

Issue - State: closed - Opened by phargogh about 1 year ago
Labels: enhancement

#360 - `convolve_2d` raises unhelpful error on worker timeout

Issue - State: closed - Opened by emlys about 1 year ago - 1 comment
Labels: bug

#359 - `pkg_resources` has been deprecated for metadata access

Issue - State: closed - Opened by phargogh over 1 year ago - 1 comment
Labels: bug

#358 - `raster_map` errors on valid combinations of dtype and nodata value

Issue - State: open - Opened by emlys over 1 year ago - 1 comment
Labels: bug

#357 - Update history for 2.4.2 release and add missing note from 2.4.1

Pull Request - State: closed - Opened by emlys over 1 year ago

#356 - Handle nan nodata in calculate_slope

Pull Request - State: closed - Opened by emlys over 1 year ago

#355 - Add support for python 3.12

Issue - State: closed - Opened by emlys over 1 year ago - 2 comments
Labels: task, in progress

#354 - `calculate_slope` bug when nodata is `nan`

Issue - State: closed - Opened by emlys over 1 year ago - 1 comment
Labels: bug

#353 - Add support for int64, uint64, and int8

Pull Request - State: closed - Opened by emlys over 1 year ago - 1 comment

#352 - Add support for int64 and uint64

Issue - State: closed - Opened by emlys over 1 year ago
Labels: bug

#351 - Improve `int` memory usage throughout routing

Pull Request - State: closed - Opened by phargogh over 1 year ago - 2 comments

#350 - MFD flow direction producing nodata holes on super large rasters

Issue - State: closed - Opened by phargogh over 1 year ago
Labels: bug, in progress

#349 - DOCS: a new page for basic usage

Pull Request - State: closed - Opened by davemfish over 1 year ago - 1 comment

#348 - Refactor pixel snapping into a single solution?

Issue - State: open - Opened by phargogh over 1 year ago
Labels: enhancement

#347 - DOCS: cleanup TOC and various docstring format issues

Pull Request - State: closed - Opened by davemfish over 1 year ago

#346 - API Docs: some missing docs; noisy table of contents

Issue - State: closed - Opened by davemfish over 1 year ago
Labels: bug, documentation, in progress

#345 - API Docs: add a getting started page

Issue - State: closed - Opened by davemfish over 1 year ago
Labels: documentation

#344 - 2.4.1 release

Pull Request - State: closed - Opened by emlys over 1 year ago - 1 comment

#343 - Handling complex stddev values from `raster_calculator`'s stats worker

Pull Request - State: closed - Opened by phargogh over 1 year ago

#342 - Stats worker may return a complex when pygeoprocessing is built with `Cython >= 3.0.0`

Issue - State: closed - Opened by phargogh over 1 year ago
Labels: bug, in progress

#341 - Make it easier to warn users about spatial reference mismatches or SRS being unset

Issue - State: open - Opened by phargogh over 1 year ago
Labels: enhancement

#339 - Improving references to TauDEM in routing

Pull Request - State: closed - Opened by phargogh over 1 year ago - 1 comment

#338 - Watershed delineation: handling the case where flow_dir doesn't have an SRS.

Pull Request - State: closed - Opened by phargogh over 1 year ago - 6 comments

#337 - Expose overview level to use in `warp_raster`

Pull Request - State: closed - Opened by phargogh over 1 year ago

#336 - zonal stats: look up features by FID, not attribute filter #331

Pull Request - State: closed - Opened by emlys over 1 year ago

#333 - `zonal_statistics`: expand bbox intersection to align with grid

Pull Request - State: closed - Opened by emlys over 1 year ago - 3 comments

#332 - `zonal_statistics`: error when intersection between raster and vector is small

Issue - State: closed - Opened by emlys over 1 year ago
Labels: bug

#331 - `zonal_statistics` slow on polygons that overlap nodata

Issue - State: closed - Opened by emlys over 1 year ago - 1 comment
Labels: bug, in progress

#330 - handle `numpy` dtypes for scalar values such as in `SetNoDataValue()`

Issue - State: open - Opened by davemfish over 1 year ago - 1 comment
Labels: enhancement

#329 - GDAL 3.7 changes behavior for signed bytes

Issue - State: closed - Opened by phargogh over 1 year ago - 2 comments
Labels: bug

#328 - Broken tests: `TypeError: issubclass() arg 1 must be a class`

Issue - State: closed - Opened by emlys over 1 year ago - 2 comments
Labels: bug, in progress

#327 - Implement `raster_map`

Pull Request - State: closed - Opened by emlys over 1 year ago - 1 comment

#326 - `warp_raster` is missing an option to specify the overview level

Issue - State: closed - Opened by phargogh over 1 year ago
Labels: bug, in progress

#325 - Expose `array_equals_nodata` function in api and add tests for it

Pull Request - State: closed - Opened by emlys over 1 year ago

#324 - Can we optimize `zonal_statistics` by spatially grouping polygon sets?

Issue - State: open - Opened by emlys over 1 year ago
Labels: question