nanoporetech/pinfish issues and pull requests

#28 - Make a bin

Issue - State: closed - Opened by conchoecia over 4 years ago

#27 - Polish Cluster stops midway

Issue - State: closed - Opened by KaushikPanda1 over 4 years ago - 5 comments

#26 - Added support for fasta files

Pull Request - State: closed - Opened by tleonardi over 4 years ago - 1 comment

#25 - pinfish_polish fails when run on BAM generated from fasta file

Issue - State: closed - Opened by tleonardi over 4 years ago

#24 - the same full length sequences but in different order results different result

Issue - State: closed - Opened by pynie1 over 4 years ago - 3 comments

#23 - Error racon - exit status 134

Issue - State: closed - Opened by guosongjia over 4 years ago - 2 comments

#22 - pinfish - amplicon clustering

Issue - State: closed - Opened by anitagh almost 5 years ago - 1 comment

#21 - Takes input from stdin if no input is specified

Pull Request - State: closed - Opened by ljyanesm almost 5 years ago - 1 comment

#20 - quality assessment of polished data

Issue - State: closed - Opened by MartinTes almost 5 years ago - 1 comment

#19 - polish result seems quite strange

Issue - State: closed - Opened by ljw90607 almost 5 years ago - 4 comments

#18 - error for polish cluster

Issue - State: closed - Opened by MartinTes almost 5 years ago - 10 comments

#17 - question on cluster_gff

Issue - State: closed - Opened by ljw90607 almost 5 years ago - 1 comment

#16 - polish_clusters error?

Issue - State: closed - Opened by Renxiaoliang almost 5 years ago - 14 comments

#15 - Using medaka with transcriptome data

Issue - State: closed - Opened by MartinTes almost 5 years ago - 14 comments

#14 - Scaffolding using long-read RNA?

Issue - State: closed - Opened by andreaswallberg almost 5 years ago - 1 comment

#13 - cluster_gff failed to cluster exons

Issue - State: closed - Opened by defendant602 about 5 years ago

#12 - cluster_gff option

Issue - State: closed - Opened by ljw90607 over 5 years ago - 10 comments

#11 - Question: minimum_isoform_percent

Issue - State: closed - Opened by martynakgajos over 5 years ago - 4 comments

#10 - Racon failed during polish_clusters run

Issue - State: closed - Opened by michieitel over 5 years ago - 8 comments

#9 - syntax error in pinfish/polish_clusters/check_deps.go

Issue - State: closed - Opened by mariele-lensink over 5 years ago - 1 comment

#8 - error from polish_clusters

Issue - State: closed - Opened by yuntwang over 5 years ago - 4 comments

#7 - error from spliced_bam2gff

Issue - State: closed - Opened by yuntwang over 5 years ago - 2 comments

#6 - error loading or unzipping Reference Data

Issue - State: closed - Opened by AndrewWT over 5 years ago - 1 comment

#5 - errors from polish_clusters

Issue - State: closed - Opened by Tiezhengyuan over 5 years ago - 10 comments

#4 - pinfish annotation for prokaryotic genomes fails to collapse reads

Issue - State: closed - Opened by felixgrunberger over 5 years ago - 4 comments

Ecosyste.ms: Issues

GitHub / nanoporetech/pinfish issues and pull requests