Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / nanoporetech/minknow_api issues and pull requests

#68 - Live monitoring of the minknow using the API

Issue - State: open - Opened by jjkoehorst 2 months ago - 11 comments

#66 - MinKNOW 24.02.16 error after ~4 hours of sequencing

Issue - State: open - Opened by dsiegieda 6 months ago

#65 - Mk1b not recognised when plugged in

Issue - State: open - Opened by nikelau 7 months ago

#64 - Error with requests for which authentication is required.

Issue - State: open - Opened by evfratov 10 months ago - 1 comment

#63 - realtime access to channel states from the minknow API?

Issue - State: open - Opened by JasonNPitt 11 months ago - 1 comment

#60 - BUG: minKNOW non-default data output location broken in LINUX

Issue - State: open - Opened by cement-head about 1 year ago - 39 comments

#58 - I cannot run minknow on several laptops

Issue - State: open - Opened by AttilaRatiu about 1 year ago - 1 comment

#57 - Minknow API Use

Issue - State: closed - Opened by WJohnTao over 1 year ago - 6 comments

#56 - Bump grpcio from 1.41.0 to 1.53.0

Pull Request - State: open - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#55 - Monitor device heat sink temperature during a run?

Issue - State: closed - Opened by thalljiscience over 1 year ago - 8 comments

#54 - Custom output folder as part of extra_args in start_protocol

Issue - State: open - Opened by alexandervogel over 1 year ago - 1 comment

#53 - Unable to connect to the RPC while using proxy

Issue - State: closed - Opened by Nirmal2310 over 1 year ago - 9 comments

#51 - longle flowcell not detectable

Issue - State: closed - Opened by YingziZhang-github over 1 year ago - 2 comments

#50 - More examples, phisical device simulator

Issue - State: open - Opened by wkusmirek almost 2 years ago - 4 comments

#49 - Set minimum chunk size for adaptive sequencing

Issue - State: open - Opened by TimD1 almost 2 years ago

#48 - tests/sequencing_protocols: includes running sequencing protocols in tests

Pull Request - State: closed - Opened by cmaddux almost 2 years ago

#47 - Query pore activity

Issue - State: open - Opened by mwbudde almost 2 years ago - 2 comments

#46 - How to use the extra args?

Issue - State: open - Opened by Yang990-sys almost 2 years ago - 4 comments

#45 - Initial implementation: sets up basic Manager struct

Pull Request - State: closed - Opened by cmaddux almost 2 years ago

#44 - How is Q-score calculated

Issue - State: closed - Opened by mwbudde about 2 years ago - 4 comments

#42 - Question Regarding Development with Simulation

Issue - State: open - Opened by biosero-simon about 2 years ago - 19 comments

#41 - remotely monitor the status of minknow protocol and run a custom script

Issue - State: open - Opened by dawnmy over 2 years ago - 5 comments

#40 - Access to flow cell check data

Issue - State: closed - Opened by mwbudde over 2 years ago - 2 comments

#39 - minknow_api RPC error

Issue - State: open - Opened by ccr25 over 2 years ago - 3 comments

#38 - Bad metadata key - Error 16 on Instance Service

Issue - State: open - Opened by jevansio over 2 years ago - 13 comments

#37 - Protobuff misspelled in "About"

Issue - State: closed - Opened by Koeng101 over 2 years ago - 1 comment

#36 - minknow_api cannot be imported

Issue - State: closed - Opened by mattloose over 2 years ago - 4 comments

#35 - restart position without the MiKNOW UI

Issue - State: open - Opened by zchatt over 2 years ago - 5 comments

#34 - SSL certificate unauthenticated

Issue - State: closed - Opened by zchatt almost 3 years ago - 5 comments

#33 - broken file in /data/persistence

Issue - State: closed - Opened by svennd almost 3 years ago - 6 comments

#32 - ModuleNotFoundError: No module named 'minknow_api.examples'

Issue - State: closed - Opened by Sumsarium almost 3 years ago

#31 - How to set initial "bias_voltage" or adapt it during a run?

Issue - State: closed - Opened by neuropathbasel about 3 years ago - 6 comments

#30 - can we specify toml for a sequencing run via the API?

Issue - State: closed - Opened by neuropathbasel over 3 years ago - 2 comments

#29 - How to have a buik fast5 generated through the MinKNOW API?

Issue - State: closed - Opened by neuropathbasel over 3 years ago - 1 comment

#28 - how can we modify the start_protocol.py to obtain zlib_compres fast5

Issue - State: closed - Opened by neuropathbasel over 3 years ago - 2 comments

#27 - Question regarding stopped unblock calls

Issue - State: open - Opened by JensUweUlrich over 3 years ago - 2 comments

#26 - possible to derive ID of Flowcell?

Issue - State: closed - Opened by neuropathbasel over 3 years ago - 3 comments

#25 - Messages with a `%' sign fail to send

Issue - State: closed - Opened by alexomics over 3 years ago - 2 comments

#24 - Stopping a run

Issue - State: closed - Opened by JudoWill over 3 years ago - 3 comments

#23 - Cors and minknow_api

Issue - State: closed - Opened by orel509 over 3 years ago - 3 comments

#22 - Distinguish "Mux_Scan" and "Sequencing" state

Issue - State: open - Opened by JensUweUlrich over 3 years ago - 2 comments

#19 - starting a run on a local MinION failed to find protocol

Issue - State: closed - Opened by neuropathbasel over 3 years ago - 16 comments

#18 - setting break_reads_after_seconds parameter

Issue - State: open - Opened by JensUweUlrich over 3 years ago - 2 comments

#17 - minknow_api onremote machines implemented?

Issue - State: closed - Opened by neuropathbasel over 3 years ago - 13 comments

#16 - grpc status UNAVAILABLE

Issue - State: closed - Opened by apolionman over 3 years ago - 8 comments

#15 - Pausing a run?

Issue - State: open - Opened by JensUweUlrich over 3 years ago - 3 comments

#14 - Minknow_api in web with javascript

Issue - State: open - Opened by orel509 over 3 years ago - 4 comments

#13 - Update LICENSE.txt URL schemes: http -> https

Pull Request - State: closed - Opened by thequicksort almost 4 years ago - 1 comment

#12 - Please release under a F/OSS license

Issue - State: closed - Opened by mr-c almost 4 years ago - 4 comments

#11 - Read Until update?

Issue - State: closed - Opened by daniloimparato almost 4 years ago - 6 comments

#9 - user provided name through api

Issue - State: closed - Opened by svennd over 4 years ago - 4 comments

#8 - Manager procedures not implemented?

Issue - State: closed - Opened by JensUweUlrich about 5 years ago - 4 comments

#7 - Why is internet required when sequencing is ongoing?

Issue - State: closed - Opened by harisankarsadasivan about 5 years ago - 1 comment

#6 - read until examples

Issue - State: closed - Opened by harisankarsadasivan about 5 years ago - 1 comment

#5 - The FAST5 is not dumped until I turn ON basecalling

Issue - State: closed - Opened by harisankarsadasivan about 5 years ago - 1 comment

#4 - how to turn off basecalling and also set run_id etc.

Issue - State: closed - Opened by harisankarsadasivan about 5 years ago - 2 comments

#3 - Example for stop_protocol

Issue - State: closed - Opened by harisankarsadasivan over 5 years ago - 3 comments

#2 - Error when I run the example for start_protocol.py

Issue - State: closed - Opened by harisankarsadasivan over 5 years ago - 3 comments

#1 - Using this API for run until (not read until)

Issue - State: closed - Opened by harisankarsadasivan over 5 years ago - 10 comments