Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / nanome-ai/nanome-lib issues and pull requests

#377 - Interactions API

Pull Request - State: closed - Opened by mjrosengrant about 1 year ago

#376 - make sure _process_payload() is called when uploading shapes

Pull Request - State: closed - Opened by mjrosengrant about 1 year ago

#375 - make sure response is returned for add_to_workspace calls

Pull Request - State: closed - Opened by mjrosengrant about 1 year ago

#374 - Validate session id is in dict before accessing

Pull Request - State: closed - Opened by mjrosengrant about 1 year ago

#373 - Get better error messages from plugin_server.py exceptions

Pull Request - State: closed - Opened by mjrosengrant about 1 year ago

#372 - schemas, not schema :facepalm:

Pull Request - State: closed - Opened by mjrosengrant about 1 year ago

#371 - Make sure extra requirements get installed during readthedocs build

Pull Request - State: closed - Opened by mjrosengrant about 1 year ago

#370 - Doc updates

Pull Request - State: closed - Opened by mjrosengrant about 1 year ago

#369 - add send_files_to_load to redis_interface

Pull Request - State: closed - Opened by mjrosengrant about 1 year ago

#368 - Don't pin python version in publish action

Pull Request - State: closed - Opened by mjrosengrant about 1 year ago

#367 - redis interface upgrades

Pull Request - State: closed - Opened by mjrosengrant about 1 year ago

#366 - Sdk Bug Fixes

Pull Request - State: closed - Opened by mjrosengrant about 1 year ago

#365 - Sdk updates

Pull Request - State: closed - Opened by mjrosengrant about 1 year ago

#364 - remove auto import of redis code

Pull Request - State: closed - Opened by mjrosengrant over 1 year ago

#363 - Beta folder

Pull Request - State: closed - Opened by mjrosengrant over 1 year ago

#362 - bump python version for github action

Pull Request - State: closed - Opened by mjrosengrant over 1 year ago

#361 - Schema bond fix

Pull Request - State: closed - Opened by mjrosengrant over 1 year ago

#360 - unittest for Bonding

Pull Request - State: closed - Opened by mjrosengrant over 1 year ago

#359 - Fix macro deserialize

Pull Request - State: closed - Opened by ajm13 over 1 year ago

#358 - Surrender plugin ID and reconnect if connection was ended by NTS

Pull Request - State: closed - Opened by Ramjii over 1 year ago

#357 - move all logging handlers to root logger.

Pull Request - State: closed - Opened by mjrosengrant over 1 year ago

#356 - Fix typo in ExportFilesSerializer

Pull Request - State: closed - Opened by ajm13 over 1 year ago

#355 - add docs for how to load/export complexes from/to file formats

Pull Request - State: closed - Opened by mjrosengrant over 1 year ago

#354 - use supported python version for publish action

Pull Request - State: closed - Opened by mjrosengrant over 1 year ago

#353 - Add api_definitions.py file

Pull Request - State: closed - Opened by mjrosengrant over 1 year ago

#352 - Unbound local error fix/ Rewrite test_copy.py

Pull Request - State: closed - Opened by mjrosengrant over 1 year ago

#351 - Fix image callbacks

Pull Request - State: closed - Opened by ajm13 almost 2 years ago

#350 - Add str format and exc_info where needed in logs

Pull Request - State: closed - Opened by ajm13 almost 2 years ago

#349 - Parse charges from SDF V2000 properties block

Pull Request - State: closed - Opened by ajm13 almost 2 years ago

#348 - Change str concat to str format

Pull Request - State: closed - Opened by ajm13 almost 2 years ago

#347 - Add Superimpose plugin to regression tests

Pull Request - State: closed - Opened by mjrosengrant almost 2 years ago

#346 - fix log error in dssp

Pull Request - State: closed - Opened by mjrosengrant almost 2 years ago

#345 - Add structure-prep regression tests/ Fix ECR authentication

Pull Request - State: closed - Opened by mjrosengrant almost 2 years ago

#344 - fix invalid reference to _Residue.SecondaryStructure

Pull Request - State: closed - Opened by mjrosengrant almost 2 years ago

#343 - Fix unittest Process

Pull Request - State: closed - Opened by ajm13 almost 2 years ago

#342 - add back chmod for dssp, wrap in try/except

Pull Request - State: closed - Opened by mjrosengrant almost 2 years ago

#341 - fix references to SizingTypes

Pull Request - State: closed - Opened by mjrosengrant almost 2 years ago

#340 - Config fixes

Pull Request - State: closed - Opened by mjrosengrant almost 2 years ago

#339 - upgrade python in publish.yaml

Pull Request - State: closed - Opened by mjrosengrant almost 2 years ago

#338 - remove chmod call, fix bug in previous refactor

Pull Request - State: closed - Opened by mjrosengrant almost 2 years ago

#337 - add antibodies and esp to regression tests

Pull Request - State: closed - Opened by mjrosengrant almost 2 years ago

#336 - Message/Command /Serializer refactors

Pull Request - State: closed - Opened by mjrosengrant almost 2 years ago - 1 comment

#335 - Internal refactor

Pull Request - State: closed - Opened by mjrosengrant almost 2 years ago

#334 - Remove underscores from _internal files and directories

Pull Request - State: closed - Opened by mjrosengrant almost 2 years ago

#333 - fix unittest github action

Pull Request - State: closed - Opened by mjrosengrant almost 2 years ago

#332 - Docs fixes

Pull Request - State: closed - Opened by mjrosengrant about 2 years ago

#331 - Docs fixes

Pull Request - State: closed - Opened by mjrosengrant about 2 years ago

#330 - Add missing schema for Line Shape

Pull Request - State: closed - Opened by mjrosengrant about 2 years ago

#329 - Fix logging bugs/ remove unused import

Pull Request - State: closed - Opened by mjrosengrant about 2 years ago

#328 - Fix SDF parsing associated data

Pull Request - State: closed - Opened by ajm13 about 2 years ago

#327 - bump python version in publish action

Pull Request - State: closed - Opened by mjrosengrant about 2 years ago

#326 - Use AsyncPluginInstance in plugin template

Pull Request - State: closed - Opened by mjrosengrant about 2 years ago

#325 - add 12 hour timeout for unclosed Plugin Sessions

Pull Request - State: closed - Opened by mjrosengrant about 2 years ago

#324 - Stop setting complex boxed when locked is set

Pull Request - State: closed - Opened by ajm13 about 2 years ago

#323 - Fix SDF save bug

Pull Request - State: closed - Opened by mjrosengrant about 2 years ago

#322 - Add Bfactor AlphaFold color scheme

Pull Request - State: closed - Opened by nezix over 2 years ago
Labels: enhancement

#321 - Fix bug where enabled field not being cloned

Pull Request - State: closed - Opened by mjrosengrant over 2 years ago

#320 - rename _process_network.py to _plugin_network.py

Pull Request - State: closed - Opened by mjrosengrant over 2 years ago

#319 - pass version number to Plugin during setup

Pull Request - State: closed - Opened by mjrosengrant over 2 years ago

#318 - Revert "Add plugin version to graylog logs (#317)"

Pull Request - State: closed - Opened by mjrosengrant over 2 years ago

#317 - Add plugin version to graylog logs

Pull Request - State: closed - Opened by mjrosengrant over 2 years ago

#316 - Change ProcessManager pipe to queues

Pull Request - State: closed - Opened by ajm13 over 2 years ago

#315 - Structure schema fix

Pull Request - State: closed - Opened by mjrosengrant over 2 years ago

#314 - Fix Stream schema

Pull Request - State: closed - Opened by mjrosengrant over 2 years ago

#313 - Change "DSSP Failed" log to warning

Pull Request - State: closed - Opened by ajm13 over 2 years ago

#312 - Switch out gif in readme

Pull Request - State: closed - Opened by mjrosengrant over 2 years ago

#311 - Testing refactor

Pull Request - State: closed - Opened by mjrosengrant over 2 years ago

#310 - Testing refactor

Pull Request - State: closed - Opened by mjrosengrant over 2 years ago

#309 - Add JSON Schemas for API objects

Pull Request - State: closed - Opened by mjrosengrant over 2 years ago

#308 - Split out util.Log tests into their own testcase

Pull Request - State: closed - Opened by mjrosengrant over 2 years ago

#307 - Property setters for structure classes

Pull Request - State: closed - Opened by mjrosengrant over 2 years ago

#306 - Make Color.hex output like #ffffffff

Pull Request - State: closed - Opened by ajm13 over 2 years ago

#305 - Add on_complex_list_changed to reduce repetition

Pull Request - State: closed - Opened by ajm13 over 2 years ago

#304 - Revert "Revert "_Internal Plugin refactor (#282)" (#289)"

Pull Request - State: closed - Opened by mjrosengrant over 2 years ago

#303 - Set timeoutcode constant on Process class

Pull Request - State: closed - Opened by mjrosengrant over 2 years ago

#302 - Add session id to logs

Pull Request - State: closed - Opened by mjrosengrant over 2 years ago

#301 - Ensure DEBUG logs toggle correctly based on PLUGIN_VERBOSE env var

Pull Request - State: closed - Opened by mjrosengrant over 2 years ago

#300 - Mostly Cosmetic Process refactor

Pull Request - State: closed - Opened by mjrosengrant over 2 years ago

#299 - Add Timeouts to Process API

Pull Request - State: closed - Opened by mjrosengrant over 2 years ago

#298 - Add return to async_callback exception_wrapper

Pull Request - State: closed - Opened by ajm13 over 2 years ago

#297 - Bonding and DSSP updates

Pull Request - State: closed - Opened by ajm13 over 2 years ago

#296 - Use label in log message when possible

Pull Request - State: closed - Opened by mjrosengrant over 2 years ago

#295 - disable python 2 tests

Pull Request - State: closed - Opened by mjrosengrant over 2 years ago

#294 - TEST PR clean up async test

Pull Request - State: closed - Opened by mjrosengrant over 2 years ago

#293 - Add label attribute to Processes

Pull Request - State: closed - Opened by mjrosengrant over 2 years ago

#292 - Update template

Pull Request - State: closed - Opened by ajm13 over 2 years ago

#291 - Update StackStudio v0.54

Pull Request - State: closed - Opened by ajm13 over 2 years ago

#290 - Add charge to conformer atom hash

Pull Request - State: closed - Opened by ajm13 over 2 years ago

#289 - Revert "_Internal Plugin refactor (#282)"

Pull Request - State: closed - Opened by mjrosengrant over 2 years ago

#287 - use e.args instead of e.reason for error handling

Pull Request - State: closed - Opened by mjrosengrant over 2 years ago

#286 - SMILES integrations

Pull Request - State: closed - Opened by ajm13 over 2 years ago

#285 - Fix readthedocs build, update docs

Pull Request - State: closed - Opened by ajm13 over 2 years ago

#284 - Catch errors frequently seen in Logs

Pull Request - State: closed - Opened by mjrosengrant over 2 years ago

#283 - Add support for unlit mesh material

Pull Request - State: closed - Opened by nezix over 2 years ago
Labels: enhancement

#282 - _Internal Plugin refactor

Pull Request - State: closed - Opened by mjrosengrant over 2 years ago

#281 - Better logging for Processes, unique process names

Pull Request - State: closed - Opened by mjrosengrant over 2 years ago

#280 - Fix remove errors

Pull Request - State: closed - Opened by ajm13 over 2 years ago

#279 - Add an optional listening port for monitoring

Pull Request - State: closed - Opened by Ramjii over 2 years ago