multimeric/Unipressed issues and pull requests

#39 - how many entries can be queried in UniprotkbClient.fetch_many(entry_list) at once.

Issue - State: open - Opened by Huilin-Li 3 months ago - 1 comment

#38 - Add `py.typed`

Issue - State: open - Opened by multimeric 3 months ago

#37 - Regenerate 2024-08

Pull Request - State: closed - Opened by multimeric 4 months ago

#36 - ID mapping typing

Pull Request - State: closed - Opened by multimeric 4 months ago

#35 - Specifying the organism whe using IdMappingClient

Issue - State: closed - Opened by marcorusc 4 months ago - 5 comments

#34 - Minor chores

Pull Request - State: closed - Opened by multimeric 6 months ago

#33 - Clarify which files are auto-generated

Issue - State: open - Opened by multimeric 7 months ago
Labels: documentation

#32 - Fix the constructor documentation

Issue - State: closed - Opened by multimeric 7 months ago - 1 comment

#31 - Bump lock file

Pull Request - State: closed - Opened by multimeric 7 months ago

#30 - Adds OpenTargets as From/To database

Pull Request - State: closed - Opened by hlfernandez 7 months ago - 6 comments

#29 - Prepare for 1.2.0 release

Pull Request - State: closed - Opened by multimeric over 1 year ago

#28 - Fix CI

Pull Request - State: closed - Opened by multimeric over 1 year ago

#27 - Feature/gihub issue 26 add include isoform

Pull Request - State: closed - Opened by godotgildor over 1 year ago - 6 comments

#26 - Add `include_isoform` parameter

Issue - State: closed - Opened by godotgildor over 1 year ago - 2 comments

#25 - Add FormatType to the docs, and any other missing Literals

Issue - State: open - Opened by multimeric almost 2 years ago
Labels: documentation

#24 - Include filter/field options in the documentation

Issue - State: open - Opened by multimeric about 2 years ago - 1 comment
Labels: documentation

#23 - idmapping sleep/ wait

Issue - State: open - Opened by Dan-Burns about 2 years ago - 10 comments
Labels: question

#22 - ID mapping improvements

Pull Request - State: closed - Opened by multimeric about 2 years ago

#21 - Error calling get_status() on IdMappingClient request

Issue - State: closed - Opened by hlfernandez about 2 years ago - 3 comments
Labels: bug

#20 - Readme improvements

Pull Request - State: closed - Opened by multimeric over 2 years ago

#19 - Allow any length 2 sequence to be a range

Pull Request - State: closed - Opened by multimeric over 2 years ago

#18 - Dataset classes

Pull Request - State: closed - Opened by multimeric over 2 years ago

#17 - Support ID Mapping Requests

Issue - State: closed - Opened by multimeric over 2 years ago
Labels: enhancement

#16 - Support the `/genecentric` endpoints

Issue - State: open - Opened by multimeric over 2 years ago - 1 comment
Labels: enhancement, help wanted, good first issue

#15 - Support the stream API for all search endpoints

Issue - State: open - Opened by multimeric over 2 years ago
Labels: enhancement, help wanted, good first issue

#14 - Support the `/uniprotkb/{accession}/publications` and ` /uniprotkb/{accession}/interactions` endpoints

Issue - State: open - Opened by multimeric over 2 years ago
Labels: enhancement, help wanted, good first issue

#13 - Implement a Python API for the entry retrieval API

Issue - State: closed - Opened by multimeric over 2 years ago - 1 comment
Labels: enhancement, help wanted, good first issue

#12 - Version 1.2.0

Pull Request - State: closed - Opened by multimeric over 2 years ago - 2 comments

#11 - Integrate the OpenAPI spec

Issue - State: open - Opened by multimeric over 2 years ago - 1 comment
Labels: enhancement

#10 - Fix missing fields listed only in the autocomplete

Issue - State: closed - Opened by multimeric over 2 years ago - 1 comment
Labels: bug

#9 - Investigate using Pydantic models

Issue - State: open - Opened by multimeric over 2 years ago
Labels: enhancement

#8 - Better handling for ranges

Issue - State: closed - Opened by multimeric over 2 years ago
Labels: enhancement, help wanted, good first issue

#7 - Support automatic parsing of more formats

Issue - State: open - Opened by multimeric over 2 years ago
Labels: enhancement, help wanted, good first issue

#6 - Better type annotations for `each_record()`

Issue - State: open - Opened by multimeric over 2 years ago - 1 comment
Labels: enhancement

#5 - Move `include_isoform` to `uniprotkb` only

Issue - State: closed - Opened by multimeric over 2 years ago - 1 comment
Labels: enhancement, help wanted, good first issue

#4 - Improve docstrings for "duplicate" fields like `xref` which has many value prefixes

Issue - State: open - Opened by multimeric over 2 years ago
Labels: enhancement, help wanted, good first issue

#3 - Generate `types/init.py`

Issue - State: open - Opened by multimeric over 2 years ago - 1 comment
Labels: enhancement, help wanted, good first issue

#2 - Fully deduplicate the evidence dictionaries

Issue - State: closed - Opened by multimeric over 2 years ago
Labels: enhancement

#1 - Document Literal entries

Issue - State: open - Opened by multimeric over 2 years ago - 1 comment
Labels: enhancement

GitHub / multimeric/Unipressed issues and pull requests