Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / mskcc/pipeline-kickoff issues and pull requests

#100 - [IGOWEB-1661] Account for alphanumeric run id

Pull Request - State: closed - Opened by imprezka88 over 5 years ago

#98 - [IGOWEB-1647] assign request type

Pull Request - State: closed - Opened by imprezka88 over 5 years ago - 1 comment

#98 - [IGOWEB-1647] assign request type

Pull Request - State: closed - Opened by imprezka88 over 5 years ago - 1 comment

#97 - [IGOWEB-1639] Check OtherSampleId for pooled normal

Pull Request - State: closed - Opened by imprezka88 over 5 years ago

#97 - [IGOWEB-1639] Check OtherSampleId for pooled normal

Pull Request - State: closed - Opened by imprezka88 over 5 years ago

#96 - [IGOWEB-1639] Retrieve pooled normals

Pull Request - State: closed - Opened by imprezka88 over 5 years ago

#96 - [IGOWEB-1639] Retrieve pooled normals

Pull Request - State: closed - Opened by imprezka88 over 5 years ago

#95 - [IGOWEB-1639] Look for pooled normals by CTRL and POOLEDNORMAL

Pull Request - State: closed - Opened by imprezka88 over 5 years ago - 1 comment

#95 - [IGOWEB-1639] Look for pooled normals by CTRL and POOLEDNORMAL

Pull Request - State: closed - Opened by imprezka88 over 5 years ago - 1 comment

#94 - [IGOWEB-1572] Fix patient file

Pull Request - State: closed - Opened by imprezka88 over 5 years ago

#93 - [SAP 275] refactor jira file upload

Pull Request - State: closed - Opened by lvncnt over 5 years ago

#93 - [SAP 275] refactor jira file upload

Pull Request - State: closed - Opened by lvncnt over 5 years ago

#92 - [SAP-271] search-issue-with-exact-summary-match

Pull Request - State: closed - Opened by lvncnt over 5 years ago

#92 - [SAP-271] search-issue-with-exact-summary-match

Pull Request - State: closed - Opened by lvncnt over 5 years ago

#91 - [SAP-232] restore RunNumber in request file

Pull Request - State: closed - Opened by lvncnt almost 6 years ago

#91 - [SAP-232] restore RunNumber in request file

Pull Request - State: closed - Opened by lvncnt almost 6 years ago

#90 - [SAP-218] remove-maxsamplevalidator

Pull Request - State: closed - Opened by lvncnt almost 6 years ago

#89 - [IGOWEB-1573] add project applications field to request file

Pull Request - State: closed - Opened by lvncnt almost 6 years ago

#89 - [IGOWEB-1573] add project applications field to request file

Pull Request - State: closed - Opened by lvncnt almost 6 years ago

#88 - [IGOWEB 1552] add pm check for grouping

Pull Request - State: closed - Opened by lvncnt almost 6 years ago - 1 comment

#88 - [IGOWEB 1552] add pm check for grouping

Pull Request - State: closed - Opened by lvncnt almost 6 years ago - 1 comment

#87 - [IGOWEB-1571] add compatible between NOVASEQ and HISEQ

Pull Request - State: closed - Opened by lvncnt almost 6 years ago - 1 comment

#87 - [IGOWEB-1571] add compatible between NOVASEQ and HISEQ

Pull Request - State: closed - Opened by lvncnt almost 6 years ago - 1 comment

#86 - [IGOWEB-1472] Upgrade LIMS on tango to 10.6.1

Pull Request - State: closed - Opened by lvncnt almost 6 years ago - 1 comment

#86 - [IGOWEB-1472] Upgrade LIMS on tango to 10.6.1

Pull Request - State: closed - Opened by lvncnt almost 6 years ago - 1 comment

#85 - [IGOWEB-1564] retrieve pi invest email from cmo records

Pull Request - State: closed - Opened by lvncnt almost 6 years ago - 1 comment

#85 - [IGOWEB-1564] retrieve pi invest email from cmo records

Pull Request - State: closed - Opened by lvncnt almost 6 years ago - 1 comment

#84 - [IGOWEB-1472] update sapio libs

Pull Request - State: closed - Opened by lvncnt almost 6 years ago

#83 - [SAP-131] add truseq strand check

Pull Request - State: closed - Opened by lvncnt almost 6 years ago

#83 - [SAP-131] add truseq strand check

Pull Request - State: closed - Opened by lvncnt almost 6 years ago

#81 - Igoweb 1524 refactor pooled normals

Pull Request - State: closed - Opened by imprezka88 almost 6 years ago

#81 - Igoweb 1524 refactor pooled normals

Pull Request - State: closed - Opened by imprezka88 almost 6 years ago

#80 - [IGOWEB-1520] transit to bad inputs upon invalid assay for exome

Pull Request - State: closed - Opened by lvncnt almost 6 years ago - 1 comment

#80 - [IGOWEB-1520] transit to bad inputs upon invalid assay for exome

Pull Request - State: closed - Opened by lvncnt almost 6 years ago - 1 comment

#79 - [IGOWEB-1524] Refactor pooled normals retrieval

Pull Request - State: closed - Opened by imprezka88 almost 6 years ago

#79 - [IGOWEB-1524] Refactor pooled normals retrieval

Pull Request - State: closed - Opened by imprezka88 almost 6 years ago

#78 - [IGOWEB-1513] remove deliverto entry from request file

Pull Request - State: closed - Opened by lvncnt almost 6 years ago - 1 comment

#78 - [IGOWEB-1513] remove deliverto entry from request file

Pull Request - State: closed - Opened by lvncnt almost 6 years ago - 1 comment

#77 - [IGOWEB-1511] look up kapa protocol from ancestor samples as failover

Pull Request - State: closed - Opened by lvncnt almost 6 years ago - 2 comments

#76 - [IGOWEB-1502] retrieve project manager email from lims

Pull Request - State: closed - Opened by lvncnt almost 6 years ago - 2 comments

#76 - [IGOWEB-1502] retrieve project manager email from lims

Pull Request - State: closed - Opened by lvncnt almost 6 years ago - 2 comments

#75 - [IGOWEB-654] Validate Fastqs

Pull Request - State: closed - Opened by imprezka88 about 6 years ago - 2 comments

#75 - [IGOWEB-654] Validate Fastqs

Pull Request - State: closed - Opened by imprezka88 about 6 years ago - 2 comments

#74 - [IGOWEB-1486] add regression test of manifest files generation

Pull Request - State: closed - Opened by lvncnt about 6 years ago - 4 comments

#74 - [IGOWEB-1486] add regression test of manifest files generation

Pull Request - State: closed - Opened by lvncnt about 6 years ago - 4 comments

#73 - [IGOWEB-316] Clear archive dir before rerun

Pull Request - State: closed - Opened by imprezka88 about 6 years ago

#73 - [IGOWEB-316] Clear archive dir before rerun

Pull Request - State: closed - Opened by imprezka88 about 6 years ago

#72 - [IGOWEB-1477] add integration test of run folders in mapping file

Pull Request - State: closed - Opened by lvncnt about 6 years ago - 2 comments

#72 - [IGOWEB-1477] add integration test of run folders in mapping file

Pull Request - State: closed - Opened by lvncnt about 6 years ago - 2 comments

#71 - Igoweb 454 error for multiple strands

Pull Request - State: closed - Opened by imprezka88 about 6 years ago - 9 comments

#71 - Igoweb 454 error for multiple strands

Pull Request - State: closed - Opened by imprezka88 about 6 years ago - 9 comments

#70 - [IGOWEB-1418] Add more verbose jira error msgs

Pull Request - State: closed - Opened by imprezka88 about 6 years ago - 1 comment

#69 - [IGOWEB-1439] set default cmo and igo pm

Pull Request - State: closed - Opened by lvncnt about 6 years ago

#68 - [IGOWEB-1439] Handle invalid PMs in Roslin pipeline-kickoff

Pull Request - State: closed - Opened by lvncnt about 6 years ago - 1 comment

#68 - [IGOWEB-1439] Handle invalid PMs in Roslin pipeline-kickoff

Pull Request - State: closed - Opened by lvncnt about 6 years ago - 1 comment

#67 - [IGOWEB-1442] Do not treat as error diff instr types in smart pairing

Pull Request - State: closed - Opened by imprezka88 about 6 years ago

#67 - [IGOWEB-1442] Do not treat as error diff instr types in smart pairing

Pull Request - State: closed - Opened by imprezka88 about 6 years ago

#66 - [IGOWEB-1441] POOLEDNORMAL repeated in sample mapping file

Pull Request - State: closed - Opened by lvncnt about 6 years ago - 1 comment

#65 - Igoweb 1391 pairing with diff assays

Pull Request - State: closed - Opened by imprezka88 about 6 years ago

#65 - Igoweb 1391 pairing with diff assays

Pull Request - State: closed - Opened by imprezka88 about 6 years ago

#64 - [IGOWEB-1425] Correct logged preservation type

Pull Request - State: closed - Opened by lvncnt about 6 years ago - 2 comments

#64 - [IGOWEB-1425] Correct logged preservation type

Pull Request - State: closed - Opened by lvncnt about 6 years ago - 2 comments

#63 - [IGOWEB-1421] Optimize retrieving poolednormals

Pull Request - State: closed - Opened by imprezka88 about 6 years ago - 1 comment

#63 - [IGOWEB-1421] Optimize retrieving poolednormals

Pull Request - State: closed - Opened by imprezka88 about 6 years ago - 1 comment

#62 - [IGOWEB-1420] Default Human species for Pooled Normal

Pull Request - State: closed - Opened by imprezka88 about 6 years ago

#62 - [IGOWEB-1420] Default Human species for Pooled Normal

Pull Request - State: closed - Opened by imprezka88 about 6 years ago

#61 - [IGOWEB-1378] Add error message for notification email

Pull Request - State: closed - Opened by imprezka88 about 6 years ago - 2 comments

#61 - [IGOWEB-1378] Add error message for notification email

Pull Request - State: closed - Opened by imprezka88 about 6 years ago - 2 comments

#60 - release 1.22.0

Pull Request - State: closed - Opened by lvncnt about 6 years ago

#60 - release 1.22.0

Pull Request - State: closed - Opened by lvncnt about 6 years ago

#59 - [IGOWEB-1376] Chnage integration tests to not to rely on LIMS contents

Pull Request - State: closed - Opened by imprezka88 about 6 years ago - 1 comment

#59 - [IGOWEB-1376] Chnage integration tests to not to rely on LIMS contents

Pull Request - State: closed - Opened by imprezka88 about 6 years ago - 1 comment

#58 - [IGOWEB-1377] Retrieve ProjectId from SampleSet Name

Pull Request - State: closed - Opened by imprezka88 about 6 years ago

#58 - [IGOWEB-1377] Retrieve ProjectId from SampleSet Name

Pull Request - State: closed - Opened by imprezka88 about 6 years ago

#57 - Igoweb 957 multiple species

Pull Request - State: closed - Opened by imprezka88 about 6 years ago

#57 - Igoweb 957 multiple species

Pull Request - State: closed - Opened by imprezka88 about 6 years ago

#56 - [IGOWEB-1241] Add script to run integration tests

Pull Request - State: closed - Opened by imprezka88 over 6 years ago

#55 - [IGOWEB-1241] Send notification on integration tests failure

Pull Request - State: closed - Opened by imprezka88 over 6 years ago

#54 - [IGOWEB-1206] Add error message for empty patient id

Pull Request - State: closed - Opened by imprezka88 over 6 years ago

#52 - [IGOWEB-1221] Resolve investigator and data analyst from prime request

Pull Request - State: closed - Opened by imprezka88 over 6 years ago

#52 - [IGOWEB-1221] Resolve investigator and data analyst from prime request

Pull Request - State: closed - Opened by imprezka88 over 6 years ago

#51 - [IGOWEB-1198] Fix pairing with external samples

Pull Request - State: closed - Opened by imprezka88 over 6 years ago

#50 - [IGOWEB-1081] Assign Default PM for NO PM requests

Pull Request - State: closed - Opened by imprezka88 over 6 years ago

#50 - [IGOWEB-1081] Assign Default PM for NO PM requests

Pull Request - State: closed - Opened by imprezka88 over 6 years ago

#49 - Igoweb 1172 pair pooled normals

Pull Request - State: closed - Opened by imprezka88 over 6 years ago

#49 - Igoweb 1172 pair pooled normals

Pull Request - State: closed - Opened by imprezka88 over 6 years ago

#48 - [IGOWEB-1172] Pair pooled normals

Pull Request - State: closed - Opened by imprezka88 over 6 years ago

#48 - [IGOWEB-1172] Pair pooled normals

Pull Request - State: closed - Opened by imprezka88 over 6 years ago

#47 - [IGOWEB-1162] Save all versions of mapping file

Pull Request - State: closed - Opened by imprezka88 over 6 years ago

#47 - [IGOWEB-1162] Save all versions of mapping file

Pull Request - State: closed - Opened by imprezka88 over 6 years ago

#46 - Igoweb 1162 save all mapping files

Pull Request - State: closed - Opened by imprezka88 over 6 years ago - 1 comment

#46 - Igoweb 1162 save all mapping files

Pull Request - State: closed - Opened by imprezka88 over 6 years ago - 1 comment

#45 - [IGOWEB-1160] Take Seq name from any passed run

Pull Request - State: closed - Opened by imprezka88 over 6 years ago

#44 - [IGOWEB-1142] Generate Sample key file for more than 0 samples

Pull Request - State: closed - Opened by imprezka88 over 6 years ago

#44 - [IGOWEB-1142] Generate Sample key file for more than 0 samples

Pull Request - State: closed - Opened by imprezka88 over 6 years ago