Ecosyste.ms: Issues

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GitHub / mskcc/lohhla issues and pull requests

#23 - example running error

Issue - State: open - Opened by khksw0403 6 months ago

#22 - Running HG38 and other bugs in the code

Issue - State: open - Opened by vaksmaz 10 months ago

#20 - Fix read.table error with mpileup

Pull Request - State: closed - Opened by anoronh4 over 1 year ago

#19 - Error in read.table

Issue - State: closed - Opened by anoronh4 over 1 year ago - 1 comment

#17 - output

Issue - State: open - Opened by BGI2016 over 2 years ago

#16 - Get the file solutions.txt

Issue - State: open - Opened by shzyjbren about 3 years ago

#15 - unable to run lohhla on test data.

Issue - State: open - Opened by iichelhadi over 3 years ago - 2 comments

#14 - Coverage requirements for LOHHLA

Issue - State: open - Opened by ahwanpandey over 3 years ago - 1 comment

#13 - correct software name "Novoalign"

Pull Request - State: open - Opened by limbo1996 almost 4 years ago

#12 - Parameters CopyNumLoc

Issue - State: open - Opened by Lxb-qqyb over 4 years ago

#11 - error catching for read table

Pull Request - State: closed - Opened by gongyixiao over 4 years ago
Labels: bug

#10 - more error catching

Pull Request - State: closed - Opened by gongyixiao over 4 years ago
Labels: bug

#9 - remove full directory path from BAMid in LOHHLAscript.R

Issue - State: open - Opened by anoronh4 over 4 years ago - 2 comments

#8 - Update LOHHLAscript.R

Pull Request - State: closed - Opened by gongyixiao about 5 years ago

#7 - Update LOHHLAscript.R

Pull Request - State: closed - Opened by gongyixiao about 5 years ago

#6 - Bugfix/all homozygous error

Pull Request - State: closed - Opened by evanbiederstedt over 5 years ago - 1 comment

#5 - Bugfix/all homozygous error

Pull Request - State: closed - Opened by kpjonsson over 5 years ago - 1 comment
Labels: bug

#4 - Changing this may make the exit 1 error disappear

Issue - State: closed - Opened by gongyixiao over 5 years ago - 1 comment
Labels: enhancement

#3 - Feature/fix xls remove intermediate

Pull Request - State: closed - Opened by evanbiederstedt over 5 years ago

#2 - Add informative errors to the R script

Issue - State: open - Opened by evanbiederstedt almost 6 years ago - 2 comments
Labels: enhancement

#1 - R script corrections for Nextflow

Pull Request - State: closed - Opened by evanbiederstedt almost 6 years ago - 6 comments