Ecosyste.ms: Issues

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GitHub / mossjacob/pyslingshot issues and pull requests

#16 - change color lineages

Issue - State: open - Opened by anke-king 2 months ago

#15 - TypeError: can only concatenate str (not "int") to str

Issue - State: closed - Opened by KeitaSaeki 11 months ago - 4 comments

#14 - Improve compatibility with AnnData

Pull Request - State: closed - Opened by mossjacob 12 months ago

#13 - How to use scRNAseq anndata with slingshot python package

Issue - State: closed - Opened by ryanhchung about 1 year ago - 1 comment

#12 - easier installation / integration into scverse

Issue - State: closed - Opened by esrice about 1 year ago - 4 comments

#11 - Pseudotime

Pull Request - State: closed - Opened by dsm-72 over 1 year ago - 1 comment

#10 - ZeroDivisonError

Issue - State: closed - Opened by dsm-72 over 1 year ago - 1 comment

#9 - Performance and reliability

Issue - State: open - Opened by jeskowagner about 2 years ago - 1 comment

#8 - If clusters are more than 20, the algorithm crashes

Issue - State: closed - Opened by YazdanZ over 2 years ago - 2 comments

#7 - rough curves

Issue - State: closed - Opened by TiamHeydari over 2 years ago - 1 comment

#6 - ValueError: alpha (nan) is outside 0-1 range

Issue - State: closed - Opened by dsm-72 over 2 years ago - 3 comments

#5 - how an obtein the pseudotime in a numpy variable

Issue - State: closed - Opened by CRISTIANJULIOCESAR over 2 years ago - 1 comment

#4 - Make it available for installation through git

Pull Request - State: closed - Opened by gatocor almost 3 years ago

#3 - Fixes clusters bug, adds end nodes support, saving and loading

Pull Request - State: closed - Opened by mossjacob almost 3 years ago

#2 - If clusters are more than 10, the algorithm crashes

Issue - State: closed - Opened by gatocor almost 3 years ago - 2 comments

#1 - Slingshot initial working procedure

Pull Request - State: closed - Opened by mossjacob about 3 years ago