Ecosyste.ms: Issues

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GitHub / morteza/CogPonder issues and pull requests

#81 - Update README

Issue - State: closed - Opened by morteza about 1 year ago
Labels: documentation

#79 - Measure SMAPE (for RT) and ImmitationAccuracy (for Response)

Issue - State: closed - Opened by morteza over 1 year ago

#78 - Reshape N-back data to contain previous N trials

Issue - State: closed - Opened by morteza over 1 year ago

#77 - Re-train N-Back using spatiotemporal + sequential_data

Issue - State: closed - Opened by morteza over 1 year ago

#76 - Fix stim format in stroop data loader (add additional axis)

Issue - State: closed - Opened by morteza over 1 year ago

#75 - identical spatiotemporal operator for stroop/n-back

Issue - State: closed - Opened by morteza over 1 year ago
Labels: enhancement

#74 - Devise multitask data loader for CogPonder

Issue - State: closed - Opened by morteza over 1 year ago

#73 - Devise multitask arch for CogPonder

Issue - State: closed - Opened by morteza over 1 year ago

#72 - Submit CogPonder to CCN2023

Issue - State: closed - Opened by morteza over 1 year ago
Labels: documentation

#71 - track R2/Corr for the RT

Issue - State: closed - Opened by morteza over 1 year ago

#69 - Summarize CogPonder even more for CCN (2 pages)

Issue - State: closed - Opened by morteza over 1 year ago

#68 - Append subject embedding to the input

Issue - State: closed - Opened by morteza over 1 year ago

#67 - Append subject embedding to the inputs of the controller

Issue - State: closed - Opened by morteza over 1 year ago

#66 - Increase fonts in CCN figures

Issue - State: closed - Opened by morteza over 1 year ago
Labels: enhancement

#65 - Summarize CogPonder for CCN2023

Issue - State: closed - Opened by morteza over 1 year ago - 2 comments

#64 - Move CogPonder paper to quarto

Issue - State: closed - Opened by morteza over 1 year ago

#63 - Decide on preprint of CogPonder

Issue - State: closed - Opened by morteza over 1 year ago

#62 - Review ICML2022 reviews

Issue - State: closed - Opened by morteza over 1 year ago

#61 - Update time loss to calculate separate loss per contexts

Issue - State: closed - Opened by morteza over 1 year ago

#60 - Prepare submission for ICML 2023

Issue - State: closed - Opened by morteza almost 2 years ago

#58 - Instead of millis, use "seconds" to model time

Issue - State: closed - Opened by morteza almost 2 years ago

#57 - Add N-back to the Figure 1 (loss over epochs)

Issue - State: closed - Opened by morteza almost 2 years ago

#55 - Plot Stroop RTs per trial conditions (congruent vs incongruent)

Issue - State: closed - Opened by morteza almost 2 years ago

#54 - Add non-decision time to the hyper-parameters for the data modules

Issue - State: closed - Opened by morteza almost 2 years ago

#52 - Convert stroop responses to "word" and "ink"

Issue - State: closed - Opened by morteza about 2 years ago

#51 - Extend the implications

Issue - State: closed - Opened by morteza about 2 years ago
Labels: documentation

#50 - CogPonder draft-v3

Issue - State: closed - Opened by morteza about 2 years ago

#49 - Finalize figures

Issue - State: closed - Opened by morteza about 2 years ago
Labels: documentation, enhancement

#48 - Update results

Issue - State: closed - Opened by morteza about 2 years ago
Labels: documentation, enhancement

#47 - Compile a 2nd draft (CogPonder)

Issue - State: closed - Opened by morteza about 2 years ago
Labels: documentation

#46 - Fix stroop loss calculation

Issue - State: closed - Opened by morteza about 2 years ago
Labels: bug

#45 - remove LFS files from the history

Issue - State: closed - Opened by morteza about 2 years ago

#44 - DVC the repo

Issue - State: closed - Opened by morteza about 2 years ago

#43 - Finalize SRO stroop dataset

Issue - State: closed - Opened by morteza about 2 years ago
Labels: bug

#42 - MultiSubject CogPonder model (i.e., subject embedding)

Issue - State: closed - Opened by morteza about 2 years ago - 1 comment

#41 - Verify losses and decisions without pondering

Issue - State: closed - Opened by morteza about 2 years ago

#40 - trace accuracy using pytorch-metric

Issue - State: closed - Opened by morteza about 2 years ago

#39 - Move losses to separate files

Issue - State: closed - Opened by morteza about 2 years ago
Labels: enhancement

#38 - Update loss function (only empirical RT regularizer)

Issue - State: closed - Opened by morteza about 2 years ago
Labels: bug

#37 - Prepare Pilot8 dataset for N-back and AX-CPT

Issue - State: closed - Opened by morteza about 2 years ago - 1 comment

#36 - Prepare SRO dataset for N-back

Issue - State: closed - Opened by morteza about 2 years ago
Labels: enhancement

#35 - Review new CogPonder references on Zotero (as of Sep 21)

Issue - State: closed - Opened by morteza about 2 years ago
Labels: documentation

#34 - Redraw Figure4 as a cumulative RT distributions

Issue - State: closed - Opened by morteza about 2 years ago

#33 - Improve Chapter 3 outline (v2)

Issue - State: closed - Opened by morteza about 2 years ago
Labels: documentation, enhancement

#32 - Cleanup CogPonder project and notebooks

Issue - State: closed - Opened by morteza about 2 years ago
Labels: documentation, enhancement

#31 - Rewrite loss function as one with 3 components (reconn, reg1, reg2)

Issue - State: closed - Opened by morteza about 2 years ago
Labels: enhancement

#30 - hyper-opt lambda, beta1, and beta2, non-decision time

Issue - State: closed - Opened by morteza about 2 years ago

#29 - Review and revise highlights of all sections of the thesis

Issue - State: closed - Opened by morteza about 2 years ago
Labels: documentation

#28 - Full draft of the CogPonder chapter (v1)

Issue - State: closed - Opened by morteza about 2 years ago - 1 comment
Labels: documentation

#27 - Add RT comparison figure

Issue - State: closed - Opened by morteza about 2 years ago
Labels: bug

#26 - Finalize Accuracy figure

Issue - State: closed - Opened by morteza about 2 years ago

#25 - Mention beta (.1) in evaluation

Issue - State: closed - Opened by morteza about 2 years ago

#24 - Improve halting problem slide

Issue - State: closed - Opened by morteza about 2 years ago

#23 - Update slide titles

Issue - State: closed - Opened by morteza about 2 years ago

#22 - finalize loss figure

Issue - State: closed - Opened by morteza about 2 years ago

#21 - Update CogPonder loss formula

Issue - State: closed - Opened by morteza about 2 years ago

#20 - rephrase speaker notes with wordtune

Issue - State: closed - Opened by morteza about 2 years ago
Labels: enhancement

#19 - CogPonder Slides (Speaker Notes)

Issue - State: closed - Opened by morteza about 2 years ago

#18 - Add a slide for "the predictor" device

Issue - State: closed - Opened by morteza about 2 years ago
Labels: documentation

#17 - Review RT history

Issue - State: closed - Opened by morteza about 2 years ago

#16 - Review AX-CPT data (or other REs) as alternative to NB

Issue - State: closed - Opened by morteza about 2 years ago
Labels: enhancement

#15 - Sketch figures and formulas

Issue - State: closed - Opened by morteza about 2 years ago

#14 - Review VRC & RTNet

Issue - State: closed - Opened by morteza about 2 years ago

#13 - Review DDM papers

Issue - State: closed - Opened by morteza about 2 years ago

#11 - Revise ICOM model to receive only one symbol and produce one symbol

Issue - State: closed - Opened by morteza about 2 years ago
Labels: enhancement

#10 - CogPonder Outline (v1)

Issue - State: closed - Opened by morteza about 2 years ago
Labels: documentation

#9 - Add figures and formulas to the CogPonder slides

Issue - State: closed - Opened by morteza over 2 years ago
Labels: documentation

#8 - Rewrite training loop to train on batched data

Issue - State: closed - Opened by morteza over 2 years ago
Labels: enhancement

#7 - Update 'y' so it is a match when 'X' implies so

Issue - State: closed - Opened by morteza over 2 years ago
Labels: bug, enhancement

#6 - Remove the unnecessary dimensions of lambda_n, p_halt, and p_continue

Issue - State: closed - Opened by morteza over 2 years ago
Labels: enhancement

#5 - Fix train/eval loops for batched inputs

Issue - State: closed - Opened by morteza over 2 years ago
Labels: bug

#4 - Init slides for Sep 1 lab talk at Brown U

Issue - State: closed - Opened by morteza over 2 years ago - 1 comment
Labels: documentation

#3 - Rewrite Ponder on ICOM notebook and fix pytorch bugs

Issue - State: closed - Opened by morteza over 2 years ago

#2 - write a summary and reading list for CogPonder and send it to Ben

Issue - State: closed - Opened by morteza over 2 years ago - 1 comment
Labels: documentation

#1 - Create repo and import previously developed codes

Issue - State: closed - Opened by morteza over 2 years ago