morphometrics/morphometrics issues and pull requests

#57 - add DOI to readme

Pull Request - State: closed - Opened by kevinyamauchi over 1 year ago

#56 - Skeleton model

Pull Request - State: closed - Opened by kevinyamauchi over 1 year ago - 1 comment

#55 - use morphometrics-engine for region props

Pull Request - State: closed - Opened by kevinyamauchi over 1 year ago

#54 - Add label smoothing

Pull Request - State: closed - Opened by kevinyamauchi over 1 year ago

#53 - Update installation instructions in documentation

Issue - State: open - Opened by marabuuu over 1 year ago

#52 - update colormap limit for label curator

Pull Request - State: closed - Opened by kevinyamauchi over 1 year ago

#51 - add substack viewer model

Pull Request - State: open - Opened by kevinyamauchi over 1 year ago

#50 - Multi canvas labeler

Pull Request - State: closed - Opened by kevinyamauchi over 1 year ago - 1 comment

#49 - don't delete validated labels

Pull Request - State: closed - Opened by kevinyamauchi over 1 year ago

#48 - add validated labels

Pull Request - State: closed - Opened by kevinyamauchi almost 2 years ago

#47 - increase colormap size

Pull Request - State: closed - Opened by kevinyamauchi almost 2 years ago

#46 - fix deps and test cleanup

Pull Request - State: closed - Opened by kevinyamauchi almost 2 years ago - 1 comment

#45 - Standardize Surface-Measurements API (feature request)

Issue - State: open - Opened by haesleinhuepf about 2 years ago - 11 comments

#44 - Update environment.yml

Pull Request - State: closed - Opened by kevinyamauchi about 2 years ago

#43 - update ci installation

Pull Request - State: closed - Opened by kevinyamauchi about 2 years ago - 1 comment

#42 - Don't depend on napari[all] due to PyQt5

Pull Request - State: closed - Opened by psobolewskiPhD about 2 years ago - 1 comment

#41 - fix bug in lower triangle to full matrix

Pull Request - State: closed - Opened by kevinyamauchi about 2 years ago

#40 - Neighborhood tests are failing

Issue - State: closed - Opened by kevinyamauchi about 2 years ago

#39 - add prototype multiviewer labeler

Pull Request - State: closed - Opened by kevinyamauchi about 2 years ago - 2 comments

#38 - auto-update layer selection

Pull Request - State: open - Opened by haesleinhuepf about 2 years ago

#37 - Reduce code-duplication in regionprops

Issue - State: open - Opened by haesleinhuepf about 2 years ago - 3 comments

#36 - make layout slimmer

Pull Request - State: closed - Opened by haesleinhuepf about 2 years ago

#35 - issue with pymeshfix

Issue - State: open - Opened by haesleinhuepf about 2 years ago - 2 comments

#34 - Segmentation pipeline

Pull Request - State: open - Opened by moli42 about 2 years ago

#33 - update readme badges

Pull Request - State: closed - Opened by kevinyamauchi about 2 years ago - 1 comment

#32 - Add neighborhood analysis

Pull Request - State: closed - Opened by kevinyamauchi about 2 years ago

#31 - mesh data model

Issue - State: open - Opened by kevinyamauchi over 2 years ago - 4 comments

#30 - GPL dependencies?

Issue - State: open - Opened by kevinyamauchi over 2 years ago - 3 comments

#29 - Update setup.cfg

Pull Request - State: closed - Opened by kevinyamauchi over 2 years ago - 1 comment

#28 - fix openCL tests

Pull Request - State: closed - Opened by kevinyamauchi over 2 years ago - 4 comments

#27 - initial radial menu

Pull Request - State: open - Opened by kevinyamauchi over 2 years ago - 2 comments

#26 - update numpy dependency

Pull Request - State: closed - Opened by kevinyamauchi over 2 years ago

#25 - pinned numpy

Issue - State: closed - Opened by haesleinhuepf over 2 years ago - 4 comments

#24 - Refactor labeling gui

Pull Request - State: closed - Opened by kevinyamauchi over 2 years ago - 1 comment

#23 - openCL needs to be tested on CI

Issue - State: closed - Opened by kevinyamauchi over 2 years ago - 1 comment

#22 - Labeling gui

Pull Request - State: closed - Opened by kevinyamauchi over 2 years ago - 3 comments

#21 - QhullError when trying to measure size or shape of single-slice label object on 3D image

Issue - State: closed - Opened by loicsauteur over 2 years ago - 5 comments

#20 - add voxelization of meshes

Pull Request - State: closed - Opened by kevinyamauchi over 2 years ago - 1 comment

#19 - update surface distance example

Pull Request - State: closed - Opened by kevinyamauchi over 2 years ago

#18 - Add cluster annotator workflow

Pull Request - State: closed - Opened by kevinyamauchi over 2 years ago - 1 comment

#17 - update intensity measurement to account for no internal pixels

Pull Request - State: closed - Opened by kevinyamauchi over 2 years ago - 1 comment

#16 - Update surface

Pull Request - State: closed - Opened by kevinyamauchi over 2 years ago - 1 comment

#15 - fix broken link

Pull Request - State: closed - Opened by haesleinhuepf over 2 years ago - 1 comment

#14 - Mesh object example

Pull Request - State: closed - Opened by kevinyamauchi over 2 years ago

#13 - Add examples screenshots

Pull Request - State: closed - Opened by kevinyamauchi over 2 years ago

#12 - add examples

Pull Request - State: closed - Opened by kevinyamauchi over 2 years ago - 1 comment

#11 - add additional examples to readme

Pull Request - State: closed - Opened by kevinyamauchi over 2 years ago - 2 comments

#10 - update readme

Pull Request - State: closed - Opened by kevinyamauchi over 2 years ago

#9 - add surface distance calculation

Pull Request - State: closed - Opened by kevinyamauchi over 2 years ago - 2 comments

#8 - [WIP] switch CI to tox-conda

Pull Request - State: closed - Opened by kevinyamauchi over 2 years ago - 1 comment

#7 - Update CI to use tox-conda

Issue - State: open - Opened by kevinyamauchi over 2 years ago

#6 - update github actions workflow to use conda

Pull Request - State: closed - Opened by kevinyamauchi over 2 years ago - 1 comment

#5 - Mesh measurements

Pull Request - State: closed - Opened by kevinyamauchi over 2 years ago - 2 comments

#4 - update sample data tests

Pull Request - State: closed - Opened by kevinyamauchi over 2 years ago

#3 - Measurement engine requirements

Issue - State: open - Opened by Czaki almost 3 years ago - 2 comments

#2 - Interoperability versus incorporating with/ other python packages

Issue - State: open - Opened by haesleinhuepf almost 3 years ago - 5 comments

#1 - [WIP] Initial structure

Pull Request - State: closed - Opened by kevinyamauchi almost 3 years ago - 6 comments

GitHub / morphometrics/morphometrics issues and pull requests