molstar/molstar issues and pull requests

#827 - how to add 3d box?

Issue - State: closed - Opened by wangsiqian over 1 year ago

#827 - how to add 3d box?

Issue - State: closed - Opened by wangsiqian over 1 year ago

#826 - Graph & bonds calc tweaks & fixes

Pull Request - State: closed - Opened by arose over 1 year ago

#825 - Immer, es6 & beyond

Pull Request - State: closed - Opened by arose over 1 year ago
Labels: enhancement

#824 - Event for drawing and loading completion

Issue - State: closed - Opened by drizhina over 1 year ago - 3 comments
Labels: question

#822 - How can I programmatically select multiple atoms at once?

Issue - State: closed - Opened by luckyxutao over 1 year ago - 1 comment

#821 - switch off z-depth culling programmatically

Issue - State: closed - Opened by andreassteffen over 1 year ago - 3 comments
Labels: question

#820 - add cantor-pairing functions to mol-script

Pull Request - State: closed - Opened by arose over 1 year ago

#819 - Consider upgrading immerjs to v10

Issue - State: closed - Opened by arose over 1 year ago - 1 comment
Labels: enhancement

#818 - Iterating over atomgroups grouped by operatorName

Issue - State: closed - Opened by Simard302 over 1 year ago - 4 comments
Labels: question

#817 - Fix Archive PDB assembly loading

Pull Request - State: closed - Opened by dsehnal over 1 year ago

#816 - Ligands not displayed by default for pdb entries

Issue - State: closed - Opened by luckyxutao over 1 year ago - 2 comments

#815 - Add HYP to the list of amino acids

Pull Request - State: closed - Opened by valasatava over 1 year ago

#814 - how to define display order of components?

Issue - State: closed - Opened by ccbiozhaw over 1 year ago - 1 comment
Labels: question

#813 - improve bond iterator allocations by using a state/context object

Issue - State: open - Opened by arose over 1 year ago
Labels: enhancement

#812 - Parse HEADER record when reading PDB file

Pull Request - State: closed - Opened by valasatava over 1 year ago - 1 comment

#811 - SB NCBR Partial Charges: fix labels & optimize getData

Pull Request - State: closed - Opened by dsehnal over 1 year ago

#810 - Geo export2

Pull Request - State: closed - Opened by arose over 1 year ago

#809 - Adding principal axes spec

Pull Request - State: closed - Opened by giagitom over 1 year ago - 2 comments

#808 - Partial atomic charges extension

Pull Request - State: closed - Opened by MergunFrimen over 1 year ago - 1 comment

#807 - State.updateNode fix for Null parents

Pull Request - State: closed - Opened by dsehnal over 1 year ago

#806 - Selecting residues from particular asymmetric unit

Issue - State: closed - Opened by skrhakv over 1 year ago - 6 comments

#805 - PluginState.setSnapshot fix

Pull Request - State: closed - Opened by dsehnal over 1 year ago

#804 - Enable odd dash count (1,3,5)

Pull Request - State: closed - Opened by giagitom over 1 year ago - 6 comments

#803 - fix struct_conn for waters

Pull Request - State: closed - Opened by dsehnal over 1 year ago

#802 - struct-conn extension

Pull Request - State: closed - Opened by midlik over 1 year ago

#801 - Way to traverse through slices of a volume

Issue - State: closed - Opened by gfrn over 1 year ago - 3 comments

#800 - Implementing 2 colors interpolation on impostor cylinders

Pull Request - State: closed - Opened by giagitom over 1 year ago - 6 comments
Labels: enhancement

#799 - adding a surface representation to a residue selection

Issue - State: closed - Opened by andreassteffen over 1 year ago - 1 comment

#798 - iOS crashes/reloads infinitely when creating a representation for a .cif structure

Issue - State: open - Opened by luk27official over 1 year ago - 9 comments
Labels: bug, question

#797 - support ignoreHydrogens for interactions

Pull Request - State: closed - Opened by arose over 1 year ago - 1 comment

#796 - Add a uniform color theme for NtC tube that still paints the residue and segment dividers in a different color

Pull Request - State: closed - Opened by MadCatX over 1 year ago - 1 comment

#794 - How to visualize particular chain?

Issue - State: closed - Opened by haotianteng over 1 year ago - 1 comment
Labels: question

#793 - How to enable selection mode / measurements in the Docking Viewer?

Issue - State: closed - Opened by mattpangenesis over 1 year ago - 3 comments
Labels: question

#792 - can not show double bond in PDB format for small molecule

Issue - State: open - Opened by nanomolar over 1 year ago - 2 comments
Labels: enhancement, question

#791 - Big Outline scale issue?

Issue - State: closed - Opened by giagitom over 1 year ago - 2 comments

#790 - Namespace Refactor - Feature Branch

Pull Request - State: open - Opened by luna215 over 1 year ago

#789 - Refactoring away from namespace usage

Issue - State: open - Opened by luna215 over 1 year ago - 7 comments
Labels: enhancement

#788 - `length` is undefined in `readAllLinesAsync`

Issue - State: closed - Opened by russellp17 over 1 year ago - 6 comments

#787 - Address Node incompatibility in `mol-util/file-info`

Pull Request - State: closed - Opened by russellp17 over 1 year ago

#786 - How write a custom visual like a gridbox without using WebPack

Issue - State: closed - Opened by shubihu over 1 year ago - 3 comments

#785 - Paint molecular surface using partial charge

Issue - State: closed - Opened by luna215 over 1 year ago - 5 comments
Labels: question

#784 - Multi-scale SSAO can break rendering with very small viewports

Issue - State: closed - Opened by MadCatX over 1 year ago - 2 comments
Labels: bug

#783 - Ability to export model to pdb format?

Issue - State: open - Opened by luckyxutao over 1 year ago - 1 comment
Labels: enhancement, question

#782 - add eachLocation to representation/visual interface

Pull Request - State: closed - Opened by arose over 1 year ago

#781 - Control display outside and right

Issue - State: closed - Opened by bioinsilico over 1 year ago - 2 comments

#780 - How to change the atomic coordinates in the pdb file in molstar?

Issue - State: closed - Opened by luckyxutao over 1 year ago - 1 comment
Labels: question

#779 - Fix broken rendering caused by changes in 291d7abb7804d58e2ed4a35601715d50e6d4b8b8

Pull Request - State: closed - Opened by MadCatX over 1 year ago - 3 comments
Labels: bug

#778 - Fix rendering of NtC tube when some of the required atoms are missing

Pull Request - State: closed - Opened by MadCatX over 1 year ago

#777 - is there any observer to expand (full screen) action?

Issue - State: closed - Opened by bioinsilico over 1 year ago - 2 comments

#776 - Added "Zoom All", "Orient Axes", "Reset Axes" buttons

Pull Request - State: closed - Opened by midlik over 1 year ago

#775 - Added "Zoom All", "Orient Axes", "Reset Axes" buttons

Pull Request - State: closed - Opened by midlik over 1 year ago

#774 - Marking depth avoid alpha 0 rendering

Pull Request - State: closed - Opened by giagitom over 1 year ago - 1 comment

#773 - include occupancy & B_iso_or_equiv in model conformation

Pull Request - State: closed - Opened by arose over 1 year ago

#772 - Forsake lazy imports

Pull Request - State: closed - Opened by midlik over 1 year ago - 1 comment

#771 - Issue with odd aromatic dash count

Issue - State: closed - Opened by giagitom over 1 year ago - 2 comments
Labels: enhancement

#770 - Support for viewing FoldComp structures

Issue - State: open - Opened by a-r-j over 1 year ago - 4 comments
Labels: enhancement

#769 - Is there a command line option?

Issue - State: closed - Opened by dgoppenheimer over 1 year ago - 1 comment
Labels: question

#768 - Drawing a sphere

Issue - State: closed - Opened by chdominguez over 1 year ago - 6 comments
Labels: question

#767 - Dynamic `require()` calls in LazyImport causes Webpack to skip bundling dependencies

Issue - State: closed - Opened by russellp17 over 1 year ago - 13 comments
Labels: enhancement

#766 - Weird build error with 3.32.0

Issue - State: closed - Opened by luna215 over 1 year ago - 5 comments
Labels: question

#765 - Display two superposed structures

Issue - State: closed - Opened by skrhakv over 1 year ago - 2 comments
Labels: question

#764 - How do I set the theme if I load it from rawData?

Issue - State: closed - Opened by webtop1 over 1 year ago
Labels: question

#763 - Handle resizing viewer element when window remains the same size

Pull Request - State: closed - Opened by russellp17 over 1 year ago - 1 comment

#762 - add multi-scale ssao

Pull Request - State: closed - Opened by arose over 1 year ago

#760 - Loading structures from compressed file with URL

Issue - State: closed - Opened by kscgl over 1 year ago - 5 comments
Labels: enhancement

#759 - Can't colour protein by the B-factor.

Issue - State: closed - Opened by Ieremie over 1 year ago - 3 comments
Labels: question

#758 - Cannot find type definition

Issue - State: closed - Opened by Pantelispanka over 1 year ago - 4 comments
Labels: bug

#757 - Trace tweaks

Pull Request - State: closed - Opened by arose over 1 year ago - 2 comments

#756 - Initializing multiple plugins

Issue - State: closed - Opened by elliothershberg over 1 year ago - 7 comments
Labels: question

#755 - Add setFSModule to fix WebPack builds

Pull Request - State: closed - Opened by dsehnal over 1 year ago

#754 - Webpack is not getting fooled

Issue - State: closed - Opened by rtviii over 1 year ago - 2 comments

#752 - input/controls improvements

Pull Request - State: closed - Opened by arose over 1 year ago

#751 - add exposure parameter

Pull Request - State: closed - Opened by arose over 1 year ago

#749 - Resize not detected when container element changes size

Issue - State: closed - Opened by russellp17 over 1 year ago - 1 comment

#748 - "Hover" events detected on molstar even when the viewer is not the focused element

Issue - State: closed - Opened by russellp17 over 1 year ago - 3 comments
Labels: bug

#747 - Uncertainty coloring missing when loading a model + coordinates file pair

Issue - State: closed - Opened by marionatf over 1 year ago - 1 comment
Labels: enhancement

#746 - Cartoon Nucleic acid polymers colored with Element Symbol theme

Issue - State: closed - Opened by giagitom over 1 year ago - 8 comments
Labels: enhancement

#744 - How to set the State Tree as the default left panel view?

Issue - State: closed - Opened by mattpangenesis over 1 year ago - 2 comments

#743 - Hiding certain residues

Issue - State: closed - Opened by luna215 over 1 year ago - 3 comments

#742 - Selection and focus improvements

Pull Request - State: closed - Opened by jpattle over 1 year ago - 3 comments

#741 - default to only polar hydrogens

Pull Request - State: closed - Opened by mattpangenesis over 1 year ago - 1 comment

#736 - colouring according to pLDDT

Issue - State: closed - Opened by mouhandalkadri over 1 year ago - 4 comments
Labels: question

#733 - Do we have 'polyhedral' representation component for cell?

Issue - State: open - Opened by jump2cn over 1 year ago - 3 comments
Labels: enhancement, question

#732 - Color for Mesh not working - Potential bug?

Issue - State: closed - Opened by luna215 over 1 year ago - 3 comments
Labels: question

#731 - Parse CCD Files

Pull Request - State: closed - Opened by JonStargaryen over 1 year ago - 13 comments
Labels: enhancement

#728 - Issue with outline threshold and otrhographic camera view

Issue - State: closed - Opened by giagitom over 1 year ago - 1 comment
Labels: bug

#728 - Issue with outline threshold and otrhographic camera view

Issue - State: closed - Opened by giagitom over 1 year ago - 1 comment
Labels: bug

#728 - Issue with outline threshold and otrhographic camera view

Issue - State: closed - Opened by giagitom over 1 year ago - 1 comment
Labels: bug

#727 - Cartoon nucleic with sugar visual

Pull Request - State: closed - Opened by giagitom over 1 year ago - 4 comments

#726 - Local PDB files for PDBe Molstar as JS Plugin

Issue - State: closed - Opened by ShaheerSyed over 1 year ago - 1 comment
Labels: question

#725 - Fixed degenerate case (1-point) in PCA

Pull Request - State: closed - Opened by midlik over 1 year ago

#723 - deleteRepresentation functionality

Issue - State: closed - Opened by luna215 over 1 year ago - 2 comments
Labels: question

#721 - SOS!!!How do I set up to see small molecules after importing a local file?

Issue - State: closed - Opened by MenFsq over 1 year ago - 1 comment
Labels: question

#720 - How to replace them before BUild

Issue - State: closed - Opened by MenFsq over 1 year ago - 3 comments
Labels: question

#719 - How to set specific residues to certain colors / gradient colors based on the PDB B-factors

Issue - State: closed - Opened by yuanqm55 almost 2 years ago - 1 comment
Labels: question

#718 - Unexpected hydrogen bond perception

Issue - State: closed - Opened by ljmartin almost 2 years ago - 4 comments
Labels: question

#716 - ERROR in /lib/mol-util/data-source.js with version >3.30

Issue - State: closed - Opened by gustavo-salazar almost 2 years ago - 9 comments
Labels: bug, question

#711 - To embed snapshot file into a mediawiki page

Issue - State: closed - Opened by WentaoXu22 almost 2 years ago - 3 comments
Labels: question

#708 - Minor changes regarding HeadlessPluginContext

Pull Request - State: closed - Opened by midlik almost 2 years ago - 2 comments

GitHub / molstar/molstar issues and pull requests