Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / molonc/sisyphus issues and pull requests
#174 - Bump scipy from 1.1.0 to 1.11.1 in /workflows
Pull Request -
State: open - Opened by dependabot[bot] 7 months ago
Labels: dependencies
#173 - Bump aiohttp from 3.7.4.post0 to 3.9.4
Pull Request -
State: open - Opened by dependabot[bot] 7 months ago
Labels: dependencies
#172 - Bump idna from 2.7 to 3.7
Pull Request -
State: open - Opened by dependabot[bot] 8 months ago
Labels: dependencies
#171 - Bump idna from 2.7 to 3.7 in /workflows
Pull Request -
State: open - Opened by dependabot[bot] 8 months ago
Labels: dependencies
#170 - Bump cryptography from 2.2.1 to 42.0.2
Pull Request -
State: open - Opened by dependabot[bot] 9 months ago
Labels: dependencies
#169 - Bump cryptography from 2.2.1 to 42.0.2 in /workflows
Pull Request -
State: open - Opened by dependabot[bot] 9 months ago
Labels: dependencies
#168 - Bump cryptography from 2.2.1 to 42.0.0
Pull Request -
State: closed - Opened by dependabot[bot] 10 months ago
- 1 comment
Labels: dependencies
#167 - Bump cryptography from 2.2.1 to 42.0.0 in /workflows
Pull Request -
State: closed - Opened by dependabot[bot] 10 months ago
- 1 comment
Labels: dependencies
#166 - Bump aiohttp from 3.7.4.post0 to 3.9.2
Pull Request -
State: closed - Opened by dependabot[bot] 10 months ago
- 1 comment
Labels: dependencies
#165 - Bump aiohttp from 3.7.4.post0 to 3.9.0
Pull Request -
State: closed - Opened by dependabot[bot] 10 months ago
- 1 comment
Labels: dependencies
#164 - Bump paramiko from 2.4.1 to 3.4.0 in /workflows
Pull Request -
State: closed - Opened by dependabot[bot] 10 months ago
- 1 comment
Labels: dependencies
#163 - Bump urllib3 from 1.23 to 1.26.18
Pull Request -
State: closed - Opened by dependabot[bot] 10 months ago
- 1 comment
Labels: dependencies
#162 - chore(deps): bump pillow from 8.2.0 to 10.2.0
Pull Request -
State: closed - Opened by dependabot[bot] 10 months ago
- 1 comment
Labels: dependencies
#161 - chore(deps): bump jinja2 from 2.10 to 3.1.3 in /workflows
Pull Request -
State: closed - Opened by dependabot[bot] 10 months ago
- 1 comment
Labels: dependencies
#160 - chore(deps): bump jinja2 from 2.10 to 3.1.3
Pull Request -
State: closed - Opened by dependabot[bot] 10 months ago
- 1 comment
Labels: dependencies
#159 - chore(deps): bump paramiko from 2.4.1 to 3.4.0
Pull Request -
State: closed - Opened by dependabot[bot] 10 months ago
- 1 comment
Labels: dependencies
#158 - chore(deps): bump urllib3 from 1.23 to 1.26.18 in /workflows
Pull Request -
State: closed - Opened by dependabot[bot] 10 months ago
- 1 comment
Labels: dependencies
#157 - chore(deps): bump certifi from 2019.9.11 to 2022.12.7
Pull Request -
State: closed - Opened by dependabot[bot] almost 2 years ago
- 1 comment
Labels: dependencies
#156 - chore(deps): bump certifi from 2018.4.16 to 2022.12.7 in /workflows
Pull Request -
State: closed - Opened by dependabot[bot] almost 2 years ago
- 1 comment
Labels: dependencies
#155 - chore(deps): bump certifi from 2018.11.29 to 2022.12.7 in /datamanagement/miscellaneous/py2hdfread
Pull Request -
State: closed - Opened by dependabot[bot] almost 2 years ago
- 1 comment
Labels: dependencies
#154 - chore(deps): bump pillow from 8.2.0 to 9.3.0
Pull Request -
State: closed - Opened by dependabot[bot] about 2 years ago
- 1 comment
Labels: dependencies
#153 - chore(deps): bump nbconvert from 6.0.7 to 6.5.1
Pull Request -
State: closed - Opened by dependabot[bot] over 2 years ago
- 1 comment
Labels: dependencies
#152 - chore(deps): bump nbconvert from 6.0.7 to 6.3.0
Pull Request -
State: closed - Opened by dependabot[bot] over 2 years ago
- 1 comment
Labels: dependencies
#151 - chore(deps): bump mistune from 0.8.4 to 2.0.3
Pull Request -
State: closed - Opened by dependabot[bot] over 2 years ago
- 1 comment
Labels: dependencies
#150 - chore(deps): bump numpy from 1.17.4 to 1.22.0
Pull Request -
State: closed - Opened by dependabot[bot] over 2 years ago
- 1 comment
Labels: dependencies
#149 - chore(deps): bump numpy from 1.15.4 to 1.22.0 in /datamanagement/miscellaneous/py2hdfread
Pull Request -
State: closed - Opened by dependabot[bot] over 2 years ago
- 1 comment
Labels: dependencies
#148 - chore(deps): bump numpy from 1.14.5 to 1.22.0 in /workflows
Pull Request -
State: closed - Opened by dependabot[bot] over 2 years ago
- 1 comment
Labels: dependencies
#147 - chore(deps): bump notebook from 6.4.0 to 6.4.12
Pull Request -
State: closed - Opened by dependabot[bot] over 2 years ago
- 1 comment
Labels: dependencies
#146 - chore(deps): bump pyjwt from 1.7.1 to 2.4.0
Pull Request -
State: closed - Opened by dependabot[bot] over 2 years ago
- 1 comment
Labels: dependencies
#145 - chore(deps): bump pyjwt from 1.6.4 to 2.4.0 in /workflows
Pull Request -
State: closed - Opened by dependabot[bot] over 2 years ago
- 1 comment
Labels: dependencies
#144 - 2021 bccrc
Pull Request -
State: closed - Opened by seanbeatty over 2 years ago
#143 - 2021 bccrc
Pull Request -
State: closed - Opened by seanbeatty over 2 years ago
#142 - chore(deps): bump pypdf2 from 1.26.0 to 1.27.5 in /workflows
Pull Request -
State: closed - Opened by dependabot[bot] over 2 years ago
- 1 comment
Labels: dependencies
#141 - chore(deps): bump notebook from 6.4.0 to 6.4.10
Pull Request -
State: closed - Opened by dependabot[bot] over 2 years ago
- 1 comment
Labels: dependencies
#140 - chore(deps): bump paramiko from 2.6.0 to 2.10.1
Pull Request -
State: closed - Opened by dependabot[bot] over 2 years ago
- 1 comment
Labels: dependencies
#139 - chore(deps): bump paramiko from 2.4.1 to 2.10.1 in /workflows
Pull Request -
State: closed - Opened by dependabot[bot] over 2 years ago
- 1 comment
Labels: dependencies
#138 - chore(deps): bump pillow from 8.2.0 to 9.0.1
Pull Request -
State: closed - Opened by dependabot[bot] over 2 years ago
- 1 comment
Labels: dependencies
#137 - chore(deps): bump ipython from 7.13.0 to 7.16.3
Pull Request -
State: closed - Opened by dependabot[bot] almost 3 years ago
- 1 comment
Labels: dependencies
#136 - chore(deps): bump pillow from 8.2.0 to 9.0.0
Pull Request -
State: closed - Opened by dependabot[bot] almost 3 years ago
- 1 comment
Labels: dependencies
#135 - feature: add is_control to metadata.yaml
Pull Request -
State: closed - Opened by amcpherson almost 3 years ago
#134 - chore(deps): bump pillow from 8.2.0 to 8.3.2
Pull Request -
State: closed - Opened by dependabot[bot] about 3 years ago
- 1 comment
Labels: dependencies
#133 - chore(deps): bump notebook from 6.4.0 to 6.4.1
Pull Request -
State: closed - Opened by dependabot[bot] over 3 years ago
- 1 comment
Labels: dependencies
#132 - add 10x download script add jecy to jira assignment
Pull Request -
State: closed - Opened by seanbeatty over 3 years ago
#131 - chore(deps): bump urllib3 from 1.25.7 to 1.26.5
Pull Request -
State: closed - Opened by dependabot[bot] over 3 years ago
- 1 comment
Labels: dependencies
#130 - chore(deps): bump urllib3 from 1.23 to 1.26.5 in /workflows
Pull Request -
State: closed - Opened by dependabot[bot] over 3 years ago
- 1 comment
Labels: dependencies
#129 - chore(deps): bump urllib3 from 1.25.7 to 1.25.8
Pull Request -
State: closed - Opened by dependabot[bot] over 3 years ago
- 1 comment
Labels: dependencies
#128 - update exception flag for missing blob
Pull Request -
State: closed - Opened by seanbeatty over 3 years ago
#127 - chore(deps): bump pygments from 2.4.2 to 2.7.4
Pull Request -
State: closed - Opened by dependabot[bot] over 3 years ago
- 1 comment
Labels: dependencies
#126 - chore(deps): bump pyyaml from 5.1 to 5.4 in /datamanagement/miscellaneous/py2hdfread
Pull Request -
State: closed - Opened by dependabot[bot] over 3 years ago
- 1 comment
Labels: dependencies
#125 - chore(deps): bump pyyaml from 5.1.2 to 5.4
Pull Request -
State: closed - Opened by dependabot[bot] over 3 years ago
- 1 comment
Labels: dependencies
#124 - chore(deps): bump pyyaml from 3.12 to 5.4 in /workflows
Pull Request -
State: closed - Opened by dependabot[bot] over 3 years ago
- 1 comment
Labels: dependencies
#123 - chore(deps): bump jinja2 from 2.10.3 to 2.11.3
Pull Request -
State: closed - Opened by dependabot[bot] over 3 years ago
- 1 comment
Labels: dependencies
#122 - chore(deps): bump jinja2 from 2.10 to 2.11.3 in /workflows
Pull Request -
State: closed - Opened by dependabot[bot] over 3 years ago
- 1 comment
Labels: dependencies
#121 - updated requirement azure-storage-blob==12.8.0b1 is essential
Pull Request -
State: closed - Opened by seanbeatty over 3 years ago
#120 - pytesting for dbclients.tantalus
Pull Request -
State: closed - Opened by DouglasAbrams over 3 years ago
#119 - chore(deps): bump jinja2 from 2.10 to 2.10.1 in /workflows
Pull Request -
State: closed - Opened by dependabot[bot] almost 4 years ago
- 1 comment
Labels: dependencies
#118 - feature: overwrite option for transfer dataset
Pull Request -
State: closed - Opened by amcpherson almost 4 years ago
#117 - dbclient: updated azure client code
Pull Request -
State: closed - Opened by amcpherson almost 4 years ago
#116 - Update jira_utils.py
Pull Request -
State: closed - Opened by seanbeatty almost 4 years ago
#115 - added jpham's weekly reporting script
Pull Request -
State: closed - Opened by seanbeatty about 4 years ago
#114 - chore(deps): bump cryptography from 2.8 to 3.2
Pull Request -
State: closed - Opened by dependabot[bot] about 4 years ago
- 1 comment
Labels: dependencies
#113 - chore(deps): bump cryptography from 2.2.1 to 3.2 in /workflows
Pull Request -
State: closed - Opened by dependabot[bot] about 4 years ago
- 1 comment
Labels: dependencies
#112 - refactor: tenx importing and pipeline automation
Pull Request -
State: closed - Opened by jeniferpham about 4 years ago
#111 - chore: check inputs exist + other minor changes
Pull Request -
State: closed - Opened by jeniferpham about 4 years ago
#110 - chore(deps): bump urllib3 from 1.23 to 1.24.2 in /workflows
Pull Request -
State: closed - Opened by dependabot[bot] about 4 years ago
- 1 comment
Labels: dependencies
#109 - Transferfilesfix
Pull Request -
State: closed - Opened by amcpherson over 4 years ago
#108 - Addfastqmetadata
Pull Request -
State: closed - Opened by amcpherson over 4 years ago
#107 - datamanagement: rename dlp fastqs
Pull Request -
State: closed - Opened by amcpherson over 4 years ago
#106 - templates: reworked fastqs filenames
Pull Request -
State: closed - Opened by amcpherson over 4 years ago
#105 - Fixhapscells
Pull Request -
State: closed - Opened by amcpherson over 4 years ago
#104 - bugfix: cell inputs for haplotype calling
Pull Request -
State: closed - Opened by amcpherson over 4 years ago
#103 - update: spectrum normal ids
Pull Request -
State: closed - Opened by amcpherson over 4 years ago
#102 - bugfix: background image fixes
Pull Request -
State: closed - Opened by amcpherson over 4 years ago
#101 - feature: microscope preprocessing analysis
Pull Request -
State: closed - Opened by amcpherson over 4 years ago
#100 - chore: run pseudobulk after qc
Pull Request -
State: closed - Opened by jeniferpham over 4 years ago
#99 - Bugfix and Add new features
Pull Request -
State: closed - Opened by sanansakura over 4 years ago
#98 - update: cellenone scripts
Pull Request -
State: closed - Opened by amcpherson over 4 years ago
#97 - refactor: cli unified and naming from args not datasets
Pull Request -
State: closed - Opened by amcpherson over 4 years ago
#96 - Azcopytransfer
Pull Request -
State: closed - Opened by amcpherson over 4 years ago
#95 - chore: script to split qc analyses on tantalus
Pull Request -
State: closed - Opened by jeniferpham over 4 years ago
#94 - temp: recalculate is_contaminated
Pull Request -
State: closed - Opened by amcpherson over 4 years ago
#93 - feature: get most recent of multiple datasets
Pull Request -
State: closed - Opened by amcpherson over 4 years ago
#92 - TANTA-270: add jira ticket to name template of dlp bam sequence datasets
Pull Request -
State: closed - Opened by amcpherson over 4 years ago
#91 - SISY-184: remove cell filtering for snv_genotyping and allele_counting
Pull Request -
State: closed - Opened by amcpherson over 4 years ago
#90 - TANTA-271: updated naming template for dlp results
Pull Request -
State: closed - Opened by amcpherson over 4 years ago
#89 - Normalascells
Pull Request -
State: closed - Opened by amcpherson almost 5 years ago
#88 - refactor: trigger qc runs
Pull Request -
State: closed - Opened by jeniferpham almost 5 years ago
#87 - Scdna347
Pull Request -
State: closed - Opened by eliko1991 almost 5 years ago
#86 - Scdna347
Pull Request -
State: closed - Opened by eliko1991 almost 5 years ago
#85 - Qc prod
Pull Request -
State: closed - Opened by amcpherson almost 5 years ago
#84 - fastq metadata generator
Pull Request -
State: closed - Opened by eliko1991 almost 5 years ago
#83 - refactor: annotation, hmmcopy, alignment now in new class structure
Pull Request -
State: closed - Opened by amcpherson almost 5 years ago
#82 - Pseudobulktestdatasetfixup
Pull Request -
State: closed - Opened by amcpherson almost 5 years ago
#81 - Splitwgsauto
Pull Request -
State: closed - Opened by amcpherson almost 5 years ago
#80 - refactor: change bams directory
Pull Request -
State: closed - Opened by jeniferpham almost 5 years ago
#79 - Singlelibpseudobulk
Pull Request -
State: closed - Opened by amcpherson about 5 years ago
#78 - Add ability to load a single dataset
Pull Request -
State: closed - Opened by Spenca about 5 years ago
#77 - build(deps): bump paramiko from 2.4.1 to 2.4.2 in /workflows
Pull Request -
State: closed - Opened by dependabot[bot] about 5 years ago
- 1 comment
Labels: dependencies
#76 - build(deps): bump requests from 2.19.1 to 2.20.0 in /workflows
Pull Request -
State: closed - Opened by dependabot[bot] about 5 years ago
- 1 comment
Labels: dependencies
#75 - build(deps): bump cryptography from 2.2.1 to 2.3 in /workflows
Pull Request -
State: closed - Opened by dependabot[bot] about 5 years ago
- 1 comment
Labels: dependencies