Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / molgenis/vip-report-template issues and pull requests
#327 - update 'SV' variant type label to 'SV/CNV'
Pull Request -
State: closed - Opened by dennishendriksen about 1 month ago
#326 - bump dependencies
Pull Request -
State: closed - Opened by dennishendriksen about 1 month ago
#325 - PoC original straglr
Pull Request -
State: open - Opened by bartcharbon about 1 month ago
#324 - Fix: dev modus broken after <a> to <A> switch
Pull Request -
State: closed - Opened by bartcharbon 3 months ago
#323 - Fix travis
Pull Request -
State: closed - Opened by bartcharbon 4 months ago
#322 - Fix: #319 Report navigation broken due to the addition of a drive let…
Pull Request -
State: closed - Opened by bartcharbon 4 months ago
#321 - chore(deps-dev): bump ws from 8.17.0 to 8.17.1
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
- 2 comments
Labels: dependencies
#320 - chore(deps-dev): bump braces from 3.0.2 to 3.0.3
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
- 2 comments
Labels: dependencies
#319 - Report navigation broken due to the addition of a drive letter in the path
Issue -
State: closed - Opened by bartcharbon 4 months ago
#318 - Add sampletree path to variant consequence screen
Pull Request -
State: closed - Opened by bartcharbon 4 months ago
#317 - Revert "Fix #312 ClinVar conflicting filter broken"
Pull Request -
State: closed - Opened by dennishendriksen 4 months ago
#316 - Scroll variant table and filters independently
Pull Request -
State: closed - Opened by bartcharbon 4 months ago
#315 - bump dependencies, fix coverage, fix travis
Pull Request -
State: closed - Opened by dennishendriksen 4 months ago
#314 - Remove DP filter and indicator + move effect link to VIP classification
Pull Request -
State: closed - Opened by bartcharbon 4 months ago
#313 - Fix #312 ClinVar conflicting filter broken
Pull Request -
State: closed - Opened by dennishendriksen 4 months ago
#312 - ClinVar conflicting filter broken
Issue -
State: closed - Opened by dennishendriksen 4 months ago
Labels: bug
#311 - Incorrect error message when report contains too much data
Issue -
State: open - Opened by dennishendriksen 4 months ago
Labels: bug
#310 - bump dependencies
Pull Request -
State: closed - Opened by dennishendriksen 5 months ago
#309 - navigation improvements, clarify view differences, fix variant table paging
Pull Request -
State: closed - Opened by dennishendriksen 6 months ago
#308 - STR's should be filtered based on ALT rather than SVType
Issue -
State: open - Opened by bartcharbon 6 months ago
#307 - chore(deps-dev): bump vite from 5.0.12 to 5.0.13
Pull Request -
State: closed - Opened by dependabot[bot] 6 months ago
- 2 comments
Labels: dependencies
#306 - Bump template version 6.0.1
Pull Request -
State: closed - Opened by bartcharbon 8 months ago
#305 - Fix: variant type filter state is incorrectly restored
Pull Request -
State: closed - Opened by bartcharbon 8 months ago
#304 - Fix: MT and YL default selected
Pull Request -
State: closed - Opened by bartcharbon 8 months ago
#303 - Parse vcf using supplied additional metadata
Pull Request -
State: closed - Opened by dennishendriksen 8 months ago
#302 - chore(deps-dev): bump vite from 5.0.6 to 5.0.12
Pull Request -
State: closed - Opened by dependabot[bot] 9 months ago
- 1 comment
Labels: dependencies
#301 - Poc/methylation
Pull Request -
State: open - Opened by dennishendriksen 9 months ago
#300 - Fix GRCh38 mock .cram
Pull Request -
State: closed - Opened by dennishendriksen 9 months ago
#299 - Add MT and YL support
Pull Request -
State: closed - Opened by bartcharbon 9 months ago
#298 - Support additional gnomAD annotations
Pull Request -
State: closed - Opened by dennishendriksen 10 months ago
#297 - chore(deps-dev): bump vite from 4.4.9 to 4.4.12
Pull Request -
State: closed - Opened by dependabot[bot] 10 months ago
- 1 comment
Labels: dependencies
#296 - Feat: support variant type filtering
Pull Request -
State: closed - Opened by bartcharbon 10 months ago
#295 - Feat: Improved inheritance filtering: denovo possible, gene inc. pen.,inheritance modes
Pull Request -
State: closed - Opened by bartcharbon 10 months ago
- 1 comment
#294 - Fix: missing GQ not showing if filters checked
Pull Request -
State: closed - Opened by bartcharbon 11 months ago
#293 - Fix travis publish (node_js 18)
Pull Request -
State: closed - Opened by bartcharbon 11 months ago
#292 - Bump vip-report-vcf and vip-report-api
Pull Request -
State: closed - Opened by bartcharbon 11 months ago
#291 - Timestamp download filenames
Pull Request -
State: closed - Opened by dennishendriksen 11 months ago
#290 - Fix breadcrumb text overflow for long alleles
Pull Request -
State: closed - Opened by dennishendriksen 11 months ago
#289 - chore(deps-dev): bump @babel/traverse from 7.22.17 to 7.23.2
Pull Request -
State: closed - Opened by dependabot[bot] 12 months ago
- 2 comments
Labels: dependencies
#288 - Fix compound indicator for genes wihout known inheritance modes
Pull Request -
State: closed - Opened by bartcharbon 12 months ago
#287 - chore(deps-dev): bump postcss from 8.4.29 to 8.4.31
Pull Request -
State: closed - Opened by dependabot[bot] 12 months ago
- 2 comments
Labels: dependencies
#286 - 'Help' view with link to docs
Pull Request -
State: closed - Opened by dennishendriksen about 1 year ago
#285 - fix: update ClinVar ID field
Pull Request -
State: closed - Opened by dennishendriksen about 1 year ago
#284 - Update inheritance filter descriptions
Pull Request -
State: closed - Opened by dennishendriksen about 1 year ago
#283 - Fix #282 Error on missing `clinVar_CLNSIG/clinVar_CLNREVSTAT`
Pull Request -
State: closed - Opened by dennishendriksen about 1 year ago
#282 - Error if `clinVar` field exists but `clinVar_CLNSIG/clinVar_CLNREVSTAT` field doesn't
Issue -
State: closed - Opened by dennishendriksen about 1 year ago
Labels: bug
#281 - HPO filter does not show if decision tree is not provided through the cmd arguments
Issue -
State: open - Opened by bartcharbon about 1 year ago
- 3 comments
Labels: bug
#280 - Improved inheritance filtering.
Pull Request -
State: closed - Opened by bartcharbon about 1 year ago
#279 - chore: bump dependencies
Pull Request -
State: closed - Opened by dennishendriksen about 1 year ago
#278 - Variant source SNV/STR/SV filter option
Issue -
State: closed - Opened by dennishendriksen about 1 year ago
- 1 comment
Labels: enhancement
#277 - Update vip-report-template version
Pull Request -
State: closed - Opened by bartcharbon about 1 year ago
#276 - Fix #275: GADO default HC filter not working properly
Pull Request -
State: closed - Opened by bartcharbon about 1 year ago
#275 - GADO default HC filter not working properly
Issue -
State: closed - Opened by bartcharbon about 1 year ago
#273 - Bump version to 5.5.0
Pull Request -
State: closed - Opened by bartcharbon about 1 year ago
#272 - Improve gado test data + fix gado query
Pull Request -
State: closed - Opened by bartcharbon about 1 year ago
#271 - pnpm update --latest, but update prettier from 2.8.7 to 2.8.8
Pull Request -
State: closed - Opened by dennishendriksen about 1 year ago
#270 - Add gado to report template
Pull Request -
State: closed - Opened by bartcharbon over 1 year ago
#269 - Bump api to 4.3.5
Pull Request -
State: closed - Opened by bartcharbon over 1 year ago
#268 - Add description for Denovo explaining the rules used to determine this.
Pull Request -
State: closed - Opened by bartcharbon over 1 year ago
#267 - Rank genes based on a patient’s phenotypes using GADO
Pull Request -
State: closed - Opened by dennishendriksen over 1 year ago
- 1 comment
#266 - bump version to 5.3.0
Pull Request -
State: closed - Opened by bartcharbon over 1 year ago
#265 - Show classification tree path on hover
Pull Request -
State: closed - Opened by dennishendriksen over 1 year ago
#264 - Licensing issue.
Issue -
State: closed - Opened by Sreelakshmikm22 over 1 year ago
- 3 comments
#263 - ClinVar 'no value' category for variant filter
Issue -
State: closed - Opened by dennishendriksen over 1 year ago
- 1 comment
Labels: enhancement
#262 - fix:bump igv 2.15.3 to 2.15.4
Pull Request -
State: closed - Opened by dennishendriksen over 1 year ago
#261 - pnpm update --latest
Pull Request -
State: closed - Opened by dennishendriksen over 1 year ago
#260 - License Compliance is at medium risk
Issue -
State: closed - Opened by Sreelakshmikm22 over 1 year ago
- 1 comment
#259 - individual ID showing above quality and inheritance checkboxes
Issue -
State: closed - Opened by bartcharbon over 1 year ago
- 1 comment
#258 - Fix #257 Do not show read depth warning indicator if read depth is null
Pull Request -
State: closed - Opened by dennishendriksen over 1 year ago
#257 - Do not show read depth warning indicator if read depth is null
Issue -
State: closed - Opened by dennishendriksen over 1 year ago
Labels: bug
#256 - select number of records per page
Pull Request -
State: closed - Opened by dennishendriksen over 1 year ago
#255 - feat:HPO links to https://hpo.jax.org/
Pull Request -
State: closed - Opened by dennishendriksen over 1 year ago
#254 - Fix #252 Unicode character rendering broken
Pull Request -
State: closed - Opened by dennishendriksen over 1 year ago
#253 - Fix (Default) allelic imbalance filter
Pull Request -
State: closed - Opened by bartcharbon over 1 year ago
#252 - Unicode character rendering broken
Issue -
State: closed - Opened by dennishendriksen over 1 year ago
Labels: bug
#251 - Fix #246 Columns shift in case of additional VEP annotations
Pull Request -
State: closed - Opened by dennishendriksen over 1 year ago
#250 - fix:security vulnerability / bump all deps
Pull Request -
State: closed - Opened by dennishendriksen over 1 year ago
#249 - Show variants with 'undefined' inheritance match when checkbox is checked.
Pull Request -
State: closed - Opened by bartcharbon over 1 year ago
#248 - Show variants with 'null' inheritance match when checkbox is checked.
Pull Request -
State: closed - Opened by bartcharbon over 1 year ago
#247 - chore(deps): bump json5 from 2.2.1 to 2.2.3
Pull Request -
State: closed - Opened by dependabot[bot] over 1 year ago
- 2 comments
Labels: dependencies
#246 - Columns shift in case of additional VEP annotations
Issue -
State: closed - Opened by bartcharbon almost 2 years ago
Labels: bug
#245 - Add "possible compound" indicator
Pull Request -
State: closed - Opened by bartcharbon almost 2 years ago
#244 - Fix edge cases for allelic imbalance query to prevent query/indicator…
Pull Request -
State: closed - Opened by bartcharbon almost 2 years ago
#243 - Version bump report-template, report-api, report-vcf
Pull Request -
State: closed - Opened by bartcharbon almost 2 years ago
#242 - Fix Allelic imbalance determination for hom genotypes
Pull Request -
State: closed - Opened by bartcharbon almost 2 years ago
#241 - Show parents in stable order
Pull Request -
State: closed - Opened by bartcharbon almost 2 years ago
#240 - Fix Travis build
Pull Request -
State: closed - Opened by bartcharbon almost 2 years ago
#239 - Improve genotype quality filtering
Pull Request -
State: closed - Opened by bartcharbon almost 2 years ago
#238 - Fix b38 mock genes resource
Pull Request -
State: closed - Opened by bartcharbon almost 2 years ago
#237 - rename master to main
Pull Request -
State: closed - Opened by bartcharbon almost 2 years ago
#236 - Use a gff based gene track
Pull Request -
State: closed - Opened by bartcharbon almost 2 years ago
#235 - fix:home screen broken if VIP_Command contains an '='
Pull Request -
State: closed - Opened by dennishendriksen almost 2 years ago
#234 - feat:replace .bam with .cram
Pull Request -
State: closed - Opened by dennishendriksen about 2 years ago
#233 - Bump version of vcf library
Pull Request -
State: closed - Opened by bartcharbon about 2 years ago
#232 - feat:show individual VKGL lab classifications on hover
Pull Request -
State: closed - Opened by dennishendriksen about 2 years ago
#231 - fix:checkbox 'no value' not checked (closes #230)
Pull Request -
State: closed - Opened by dennishendriksen about 2 years ago
#230 - Selecting null filter does not check the box
Issue -
State: closed - Opened by dennishendriksen about 2 years ago
Labels: bug
#229 - Genome browser strand color & center line visibility
Pull Request -
State: closed - Opened by dennishendriksen about 2 years ago
#228 - Sort label 'Position' instead of empty
Pull Request -
State: closed - Opened by dennishendriksen about 2 years ago
#227 - Fix #226 Samples table family column values incorrect
Pull Request -
State: closed - Opened by dennishendriksen about 2 years ago