molgenis/vip-report-api issues and pull requests

#113 - bump dependencies

Pull Request - State: closed - Opened by dennishendriksen about 1 month ago

#112 - chore(deps-dev): bump braces from 3.0.2 to 3.0.3

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 2 comments
Labels: dependencies

#111 - Revert workaround since it now causes problems

Pull Request - State: closed - Opened by bartcharbon 4 months ago

#110 - Add sample decision tree

Pull Request - State: closed - Opened by bartcharbon 4 months ago

#109 - bump dependencies

Pull Request - State: closed - Opened by dennishendriksen 6 months ago

#108 - chore(deps-dev): bump vite from 5.0.12 to 5.2.8

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 2 comments
Labels: dependencies

#107 - parse vcf using supplied additional metadata

Pull Request - State: closed - Opened by dennishendriksen 8 months ago

#106 - chore(deps-dev): bump vite from 5.0.6 to 5.0.12

Pull Request - State: closed - Opened by dependabot[bot] 9 months ago - 1 comment
Labels: dependencies

#105 - Feat: accept bedmethyl file per sample and updated README.md

Pull Request - State: open - Opened by dennishendriksen 9 months ago

#104 - Bump report-vcf version

Pull Request - State: closed - Opened by bartcharbon 9 months ago

#103 - chore:bump dependencies

Pull Request - State: closed - Opened by dennishendriksen 10 months ago

#102 - chore(deps-dev): bump vite from 4.4.9 to 4.5.1

Pull Request - State: closed - Opened by dependabot[bot] 10 months ago - 1 comment
Labels: dependencies

#101 - Attempt to fix travis

Pull Request - State: closed - Opened by bartcharbon 10 months ago

#100 - Bump vip-report-vcf to 1.6.0

Pull Request - State: closed - Opened by bartcharbon 10 months ago

#99 - Fix Travis config (node_js 18)

Pull Request - State: closed - Opened by bartcharbon 11 months ago

#98 - Bump api to 1.4.3

Pull Request - State: closed - Opened by bartcharbon 11 months ago

#97 - chore(deps-dev): bump postcss from 8.4.29 to 8.4.31

Pull Request - State: closed - Opened by dependabot[bot] 12 months ago - 2 comments
Labels: dependencies

#96 - chore:bump vip-report-vcf 1.4.3 to 1.4.4

Pull Request - State: closed - Opened by dennishendriksen about 1 year ago

#95 - chore:bump dependencies

Pull Request - State: closed - Opened by dennishendriksen about 1 year ago

#94 - pnpm update --latest, but update prettier from 2.8.7 to 2.8.8

Pull Request - State: closed - Opened by dennishendriksen over 1 year ago

#93 - Bump api to 1.4.0

Pull Request - State: closed - Opened by bartcharbon over 1 year ago

#92 - Bump vcf lib to 1.3.6

Pull Request - State: closed - Opened by bartcharbon over 1 year ago

#91 - pnpm update --latest

Pull Request - State: closed - Opened by dennishendriksen over 1 year ago

#90 - pnpm update --latest

Pull Request - State: closed - Opened by dennishendriksen over 1 year ago

#89 - Bump vip-report-vcf version to 1.3.3

Pull Request - State: closed - Opened by bartcharbon almost 2 years ago

#88 - Support querying for undefined

Pull Request - State: closed - Opened by bartcharbon almost 2 years ago

#87 - Support querying for null

Pull Request - State: closed - Opened by bartcharbon almost 2 years ago

#86 - fix:.vcf metadata parser

Pull Request - State: closed - Opened by dennishendriksen about 2 years ago

#85 - Replace .bam with .cram

Pull Request - State: closed - Opened by dennishendriksen about 2 years ago

#84 - pnpm up --latest

Pull Request - State: closed - Opened by dennishendriksen about 2 years ago

#83 - feat:bump vip-report-vcf from 1.2.0 to 1.2.1

Pull Request - State: closed - Opened by dennishendriksen over 2 years ago

#82 - feat:bump vip-report-vcf from 1.1.1 to 1.2.0

Pull Request - State: closed - Opened by dennishendriksen over 2 years ago

#81 - Fix sortorder type

Pull Request - State: closed - Opened by bartcharbon over 2 years ago

#80 - Sort on path instead of metadata

Pull Request - State: closed - Opened by bartcharbon over 2 years ago

#79 - fix:sort null values

Pull Request - State: closed - Opened by dennishendriksen over 2 years ago

#78 - refactor:simplify sort

Pull Request - State: closed - Opened by dennishendriksen over 2 years ago

#77 - feat:sort arrays of strings/numbers

Pull Request - State: closed - Opened by dennishendriksen over 2 years ago

#76 - Add VIP metadata to API

Pull Request - State: closed - Opened by bartcharbon over 2 years ago

#75 - feat:HPO categorical, bump version to 3.2.0

Pull Request - State: closed - Opened by dennishendriksen over 2 years ago

#74 - doc:improve README

Pull Request - State: closed - Opened by dennishendriksen over 2 years ago

#73 - fix:sort of nullable values

Pull Request - State: closed - Opened by dennishendriksen over 2 years ago

#72 - feat: migrate improvements from vip-report-template

Pull Request - State: closed - Opened by dennishendriksen over 2 years ago

#71 - chore(deps): bump minimist from 1.2.5 to 1.2.6

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 2 comments
Labels: dependencies

#70 - Fix #69 Nested field parsing fails for escaped comma values

Pull Request - State: closed - Opened by dennishendriksen almost 3 years ago - 1 comment

#69 - Nested field parsing fails for escaped comma values

Issue - State: closed - Opened by dennishendriksen almost 3 years ago
Labels: bug

#68 - Fix #67 Dropped trailing FORMAT values

Pull Request - State: closed - Opened by dennishendriksen almost 3 years ago - 1 comment

#67 - The report fails if samples are present for which FORMAT fields are missing.

Issue - State: closed - Opened by bartcharbon almost 3 years ago

#66 - chore(deps): bump tmpl from 1.0.4 to 1.0.5

Pull Request - State: closed - Opened by dependabot[bot] about 3 years ago - 3 comments
Labels: dependencies

#65 - chore(deps): bump path-parse from 1.0.6 to 1.0.7

Pull Request - State: closed - Opened by dependabot[bot] about 3 years ago - 1 comment
Labels: dependencies

#64 - Add typing for decision tree

Issue - State: closed - Opened by marikaris about 3 years ago - 1 comment
Labels: enhancement

#63 - Fix name of decisiontree functions

Pull Request - State: closed - Opened by bartcharbon over 3 years ago - 1 comment

#62 - bump version 2.4.0

Pull Request - State: closed - Opened by bartcharbon over 3 years ago - 1 comment

#61 - Update README.md

Pull Request - State: closed - Opened by bartcharbon over 3 years ago

#60 - Test commit to trigger travis to see what is going on...

Pull Request - State: closed - Opened by bartcharbon over 3 years ago - 1 comment

#59 - Add decision tree json to api

Pull Request - State: closed - Opened by bartcharbon over 3 years ago - 1 comment

#58 - Fix undefined fastaGz

Pull Request - State: closed - Opened by dennishendriksen over 3 years ago

#57 - Embedded bam data per sample

Pull Request - State: closed - Opened by dennishendriksen over 3 years ago - 1 comment

#56 - Retrieve embedded bam data

Pull Request - State: closed - Opened by dennishendriksen over 3 years ago - 1 comment

#55 - Fix error if genesGz is null

Pull Request - State: closed - Opened by bartcharbon over 3 years ago - 1 comment

#54 - embedded bam/bai data

Pull Request - State: closed - Opened by bartcharbon over 3 years ago - 1 comment

#53 - Retrieve embedded genes data

Pull Request - State: closed - Opened by dennishendriksen over 3 years ago - 1 comment

#52 - Retrieve embedded reference sequence data

Pull Request - State: closed - Opened by dennishendriksen over 3 years ago - 1 comment

#51 - Embedded base85 encoded gzipped VCF

Pull Request - State: closed - Opened by dennishendriksen over 3 years ago - 1 comment

#50 - Introduce Metadata.urls

Pull Request - State: closed - Opened by dennishendriksen over 3 years ago - 1 comment

#49 - Fix #48 Query with wildcard selector 'undefined instead of array'

Pull Request - State: closed - Opened by dennishendriksen over 3 years ago

#48 - Query with wildcard selector 'undefined instead of array'

Issue - State: closed - Opened by dennishendriksen over 3 years ago
Labels: bug

#47 - Document API data format

Issue - State: closed - Opened by dennishendriksen over 3 years ago - 1 comment
Labels: documentation

#46 - Module target should be es5 instead of esnext

Issue - State: closed - Opened by dennishendriksen over 3 years ago - 1 comment
Labels: enhancement

#45 - Module should work with JavaScript in addition to TypeScript

Issue - State: closed - Opened by dennishendriksen over 3 years ago - 1 comment
Labels: enhancement

#44 - bump version to 0.8.0 after release 0.7.0

Pull Request - State: closed - Opened by bartcharbon over 3 years ago

#43 - Add <,>,<=,>= operators

Pull Request - State: closed - Opened by bartcharbon over 3 years ago

#42 - Bump version after release 0.6.0

Pull Request - State: closed - Opened by bartcharbon over 3 years ago - 1 comment

#41 - Fix security issue in dependencies

Pull Request - State: closed - Opened by bartcharbon over 3 years ago - 1 comment

#40 - hasAny and anyHasAny missing value handling

Pull Request - State: closed - Opened by dennishendriksen over 3 years ago - 1 comment

#39 - !has_any and !any_has_any query operators

Pull Request - State: closed - Opened by dennishendriksen over 3 years ago - 1 comment

#38 - composed and/or queries

Pull Request - State: closed - Opened by dennishendriksen almost 4 years ago - 1 comment

#37 - wildcard selector and has_any / any_has_any operators

Pull Request - State: closed - Opened by dennishendriksen almost 4 years ago - 1 comment

#36 - Introduce Sample.proband (required)

Pull Request - State: closed - Opened by dennishendriksen almost 4 years ago - 1 comment

#35 - Fix linting issues, always run lint with Travis, add tests

Pull Request - State: closed - Opened by dennishendriksen about 4 years ago - 1 comment

#34 - chore: bump version 0.1.0 to 0.2.0

Pull Request - State: closed - Opened by dennishendriksen about 4 years ago - 1 comment

#33 - Fix #31 Fix #32 Sorting improvements: nested & custom order

Pull Request - State: closed - Opened by dennishendriksen about 4 years ago - 1 comment

#32 - Support secondary sort

Issue - State: closed - Opened by dennishendriksen about 4 years ago
Labels: enhancement

#31 - Allow sorting on nested property

Issue - State: closed - Opened by dennishendriksen about 4 years ago
Labels: enhancement

#30 - chore(deps): bump lodash from 4.17.15 to 4.17.19

Pull Request - State: closed - Opened by dependabot[bot] about 4 years ago - 1 comment
Labels: dependencies